RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 CXCL17Q6UXB2 119 aa28.55■■■□□ 2.16
LSM6-202ENST00000502781 HTATIP2Q9BUP3 242 aa28.55■■■□□ 2.16
LSM6-202ENST00000502781 FOXP1Q9H334 677 aaPredicted RBP28.55■■■□□ 2.16
LSM6-202ENST00000502781 POLR3EQ9NVU0 708 aa28.55■■■□□ 2.16
LSM6-202ENST00000502781 NFASCO94856 1347 aa28.54■■■□□ 2.16
LSM6-202ENST00000502781 FAM205CA6NFA0 338 aa28.54■■■□□ 2.16
LSM6-202ENST00000502781 MLLT1Q03111 559 aaPredicted RBP28.54■■■□□ 2.16
LSM6-202ENST00000502781 ITGB3BPQ13352 177 aaPredicted RBP28.54■■■□□ 2.16
LSM6-202ENST00000502781 SLC39A5Q6ZMH5 540 aa28.54■■■□□ 2.16
LSM6-202ENST00000502781 NEK8Q86SG6 692 aa28.54■■■□□ 2.16
LSM6-202ENST00000502781 GLT1D1Q96MS3 346 aa28.54■■■□□ 2.16
LSM6-202ENST00000502781 PPFIA4O75335 1185 aa28.53■■■□□ 2.16
LSM6-202ENST00000502781 Q4G0T1 1027 aa28.53■■■□□ 2.16
LSM6-202ENST00000502781 PRR16Q569H4 304 aa28.53■■■□□ 2.16
LSM6-202ENST00000502781 HSCBQ8IWL3 235 aa28.53■■■□□ 2.16
LSM6-202ENST00000502781 STARD7Q9NQZ5 370 aa28.53■■■□□ 2.16
LSM6-202ENST00000502781 DHX15O43143 795 aaKnown RBP28.52■■■□□ 2.16
LSM6-202ENST00000502781 SORBS3O60504 671 aa28.52■■■□□ 2.16
LSM6-202ENST00000502781 TDP2O95551 362 aa28.52■■■□□ 2.16
LSM6-202ENST00000502781 DGKDQ16760 1214 aa28.52■■■□□ 2.16
LSM6-202ENST00000502781 LRRC26Q2I0M4 334 aa28.52■■■□□ 2.16
LSM6-202ENST00000502781 PPP4R3AQ6IN85 833 aa28.52■■■□□ 2.16
LSM6-202ENST00000502781 PKD2L1Q9P0L9 805 aa28.52■■■□□ 2.16
LSM6-202ENST00000502781 MYL3P08590 195 aa28.51■■■□□ 2.16
LSM6-202ENST00000502781 U2AF2P26368 475 aaKnown RBP eCLIP28.51■■■□□ 2.16
LSM6-202ENST00000502781 GPR20Q99678 358 aa28.51■■■□□ 2.16
LSM6-202ENST00000502781 MTG1Q9BT17 334 aaPredicted RBP28.51■■■□□ 2.16
LSM6-202ENST00000502781 TELO2Q9Y4R8 837 aa28.51■■■□□ 2.16
LSM6-202ENST00000502781 IPO5O00410 1097 aaKnown RBP28.5■■■□□ 2.15
LSM6-202ENST00000502781 GCFC2P16383 781 aaKnown RBP28.5■■■□□ 2.15
LSM6-202ENST00000502781 ATN1P54259 1190 aaPredicted RBP28.5■■■□□ 2.15
LSM6-202ENST00000502781 LETM2Q2VYF4 491 aa28.5■■■□□ 2.15
LSM6-202ENST00000502781 SLC43A3Q8NBI5 491 aa28.5■■■□□ 2.15
LSM6-202ENST00000502781 KAT2BQ92831 832 aa28.5■■■□□ 2.15
LSM6-202ENST00000502781 KIF28PB7ZC32 967 aa28.5■■■□□ 2.15
LSM6-202ENST00000502781 NAP1L4Q99733 375 aaKnown RBP28.5■■■□□ 2.15
LSM6-202ENST00000502781 SDF4Q9BRK5 362 aa28.5■■■□□ 2.15
LSM6-202ENST00000502781 JPH1Q9HDC5 661 aaPredicted RBP28.5■■■□□ 2.15
LSM6-202ENST00000502781 GRIN2DO15399 1336 aa28.49■■■□□ 2.15
LSM6-202ENST00000502781 A0A0U1RQG5 324 aaPredicted RBP28.49■■■□□ 2.15
LSM6-202ENST00000502781 MSH4O15457 936 aa28.49■■■□□ 2.15
LSM6-202ENST00000502781 CDK7P50613 346 aa28.49■■■□□ 2.15
LSM6-202ENST00000502781 NOSTRINQ8IVI9 506 aa28.49■■■□□ 2.15
LSM6-202ENST00000502781 ZNF577Q9BSK1 485 aa28.49■■■□□ 2.15
LSM6-202ENST00000502781 TBC1D22BQ9NU19 505 aa28.49■■■□□ 2.15
LSM6-202ENST00000502781 SLC9A2Q9UBY0 812 aa28.49■■■□□ 2.15
LSM6-202ENST00000502781 SCN10AQ9Y5Y9 1956 aa28.48■■■□□ 2.15
LSM6-202ENST00000502781 PDE4DIPQ5VU43 2346 aa28.48■■■□□ 2.15
LSM6-202ENST00000502781 NOP56O00567 594 aaKnown RBP28.48■■■□□ 2.15
LSM6-202ENST00000502781 LARP1BQ659C4 914 aaKnown RBP28.48■■■□□ 2.15
LSM6-202ENST00000502781 SLC5A5Q92911 643 aa28.48■■■□□ 2.15
LSM6-202ENST00000502781 C16orf70Q9BSU1 422 aa28.48■■■□□ 2.15
LSM6-202ENST00000502781 SEZ6LQ9BYH1 1024 aa28.48■■■□□ 2.15
LSM6-202ENST00000502781 DDX25Q9UHL0 483 aaKnown RBP28.48■■■□□ 2.15
LSM6-202ENST00000502781 ARVCFO00192 962 aa28.47■■■□□ 2.15
LSM6-202ENST00000502781 SLC37A4O43826 429 aa28.47■■■□□ 2.15
LSM6-202ENST00000502781 F2P00734 622 aa28.47■■■□□ 2.15
LSM6-202ENST00000502781 RTP1P59025 263 aa28.47■■■□□ 2.15
LSM6-202ENST00000502781 PSMC6P62333 389 aa28.47■■■□□ 2.15
LSM6-202ENST00000502781 ETNPPLQ8TBG4 499 aa28.47■■■□□ 2.15
LSM6-202ENST00000502781 SEPT1Q8WYJ6 367 aa28.47■■■□□ 2.15
LSM6-202ENST00000502781 RIT2Q99578 217 aa28.47■■■□□ 2.15
LSM6-202ENST00000502781 ALPK3Q96L96 1907 aa28.46■■■□□ 2.15
LSM6-202ENST00000502781 GSTTP1A0A1W2PQM5 241 aa28.46■■■□□ 2.15
LSM6-202ENST00000502781 WNT7AO00755 349 aa28.46■■■□□ 2.15
LSM6-202ENST00000502781 CCNT1O60563 726 aaKnown RBP28.46■■■□□ 2.15
LSM6-202ENST00000502781 CCNE2O96020 404 aa28.46■■■□□ 2.15
LSM6-202ENST00000502781 SP4Q02446 784 aa28.46■■■□□ 2.15
LSM6-202ENST00000502781 ITGA7Q13683 1181 aa28.46■■■□□ 2.15
LSM6-202ENST00000502781 ANKRD33Q7Z3H0 272 aa28.46■■■□□ 2.15
LSM6-202ENST00000502781 VTI1AQ96AJ9 217 aa28.46■■■□□ 2.15
LSM6-202ENST00000502781 KCNMB3Q9NPA1 279 aa28.46■■■□□ 2.15
LSM6-202ENST00000502781 DOCK5Q9H7D0 1870 aa28.46■■■□□ 2.15
LSM6-202ENST00000502781 HAS3O00219 553 aa28.45■■■□□ 2.14
LSM6-202ENST00000502781 ATG7O95352 703 aa28.45■■■□□ 2.14
LSM6-202ENST00000502781 LGALS2P05162 132 aa28.45■■■□□ 2.14
LSM6-202ENST00000502781 ZNF286BP0CG31 522 aa28.45■■■□□ 2.14
LSM6-202ENST00000502781 TRIM60Q495X7 471 aa28.45■■■□□ 2.14
LSM6-202ENST00000502781 H3BQV1 296 aa28.44■■■□□ 2.14
LSM6-202ENST00000502781 PSMD10O75832 226 aa28.44■■■□□ 2.14
LSM6-202ENST00000502781 PDCP20941 246 aa28.44■■■□□ 2.14
LSM6-202ENST00000502781 TCF7P36402 384 aaPredicted RBP28.44■■■□□ 2.14
LSM6-202ENST00000502781 ACTR2P61160 394 aa28.44■■■□□ 2.14
LSM6-202ENST00000502781 TOX2Q96NM4 488 aa28.44■■■□□ 2.14
LSM6-202ENST00000502781 UIMC1Q96RL1 719 aa28.44■■■□□ 2.14
LSM6-202ENST00000502781 TBX3O15119 743 aa28.43■■■□□ 2.14
LSM6-202ENST00000502781 TRAPPC10P48553 1259 aa28.43■■■□□ 2.14
LSM6-202ENST00000502781 GNL2Q13823 731 aaKnown RBP28.43■■■□□ 2.14
LSM6-202ENST00000502781 NBPF20Q3BBV1 942 aa28.43■■■□□ 2.14
LSM6-202ENST00000502781 DPF3Q92784 378 aa28.43■■■□□ 2.14
LSM6-202ENST00000502781 EVI5O60447 810 aa28.42■■■□□ 2.14
LSM6-202ENST00000502781 LGR5O75473 907 aa28.42■■■□□ 2.14
LSM6-202ENST00000502781 TLE2Q04725 743 aa28.42■■■□□ 2.14
LSM6-202ENST00000502781 ZNF746Q6NUN9 644 aaPredicted RBP28.42■■■□□ 2.14
LSM6-202ENST00000502781 NFRKBQ6P4R8 1299 aa28.42■■■□□ 2.14
LSM6-202ENST00000502781 B3GNT9Q6UX72 402 aa28.42■■■□□ 2.14
LSM6-202ENST00000502781 FAM20AQ96MK3 541 aa28.42■■■□□ 2.14
LSM6-202ENST00000502781 KATNAL1Q9BW62 490 aa28.42■■■□□ 2.14
LSM6-202ENST00000502781 FOXD4L1Q9NU39 408 aa28.42■■■□□ 2.14
LSM6-202ENST00000502781 ATP11BQ9Y2G3 1177 aa28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms