RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 AGO4Q9HCK5 861 aaKnown RBP17.68■□□□□ 0.42
CPNE1-228ENST00000498814 NFASCO94856 1347 aa17.68■□□□□ 0.42
CPNE1-228ENST00000498814 ELP1O95163 1332 aa17.68■□□□□ 0.42
CPNE1-228ENST00000498814 SCN10AQ9Y5Y9 1956 aa17.68■□□□□ 0.42
CPNE1-228ENST00000498814 FAM205CA6NFA0 338 aa17.67■□□□□ 0.42
CPNE1-228ENST00000498814 PPFIA4O75335 1185 aa17.67■□□□□ 0.42
CPNE1-228ENST00000498814 HOXD8P13378 290 aaPredicted RBP17.67■□□□□ 0.42
CPNE1-228ENST00000498814 PURAQ00577 322 aaKnown RBP17.67■□□□□ 0.42
CPNE1-228ENST00000498814 HSDL1Q3SXM5 330 aa17.67■□□□□ 0.42
CPNE1-228ENST00000498814 Q4G0T1 1027 aa17.67■□□□□ 0.42
CPNE1-228ENST00000498814 LARP1BQ659C4 914 aaKnown RBP17.67■□□□□ 0.42
CPNE1-228ENST00000498814 PPP4R3AQ6IN85 833 aa17.67■□□□□ 0.42
CPNE1-228ENST00000498814 CXCL17Q6UXB2 119 aa17.67■□□□□ 0.42
CPNE1-228ENST00000498814 GLT1D1Q96MS3 346 aa17.67■□□□□ 0.42
CPNE1-228ENST00000498814 NAP1L4Q99733 375 aaKnown RBP17.67■□□□□ 0.42
CPNE1-228ENST00000498814 HTATIP2Q9BUP3 242 aa17.67■□□□□ 0.42
CPNE1-228ENST00000498814 DNAH12Q6ZR08 3092 aa17.67■□□□□ 0.42
CPNE1-228ENST00000498814 SORBS3O60504 671 aa17.66■□□□□ 0.42
CPNE1-228ENST00000498814 TDP2O95551 362 aa17.66■□□□□ 0.42
CPNE1-228ENST00000498814 MYL3P08590 195 aa17.66■□□□□ 0.42
CPNE1-228ENST00000498814 GCFC2P16383 781 aaKnown RBP17.66■□□□□ 0.42
CPNE1-228ENST00000498814 U2AF2P26368 475 aaKnown RBP eCLIP17.66■□□□□ 0.428e-57■■■■□ 22.3
CPNE1-228ENST00000498814 ITGB3BPQ13352 177 aaPredicted RBP17.66■□□□□ 0.42
CPNE1-228ENST00000498814 DGKDQ16760 1214 aa17.66■□□□□ 0.42
CPNE1-228ENST00000498814 LETM2Q2VYF4 491 aa17.66■□□□□ 0.42
CPNE1-228ENST00000498814 SLC39A5Q6ZMH5 540 aa17.66■□□□□ 0.42
CPNE1-228ENST00000498814 SDF4Q9BRK5 362 aa17.66■□□□□ 0.42
CPNE1-228ENST00000498814 ZNF577Q9BSK1 485 aa17.66■□□□□ 0.42
CPNE1-228ENST00000498814 STARD7Q9NQZ5 370 aa17.66■□□□□ 0.42
CPNE1-228ENST00000498814 PKD2L1Q9P0L9 805 aa17.66■□□□□ 0.42
CPNE1-228ENST00000498814 H3BQV1 296 aa17.65■□□□□ 0.42
CPNE1-228ENST00000498814 IPO5O00410 1097 aaKnown RBP17.65■□□□□ 0.42
CPNE1-228ENST00000498814 NOP56O00567 594 aaKnown RBP17.65■□□□□ 0.42
CPNE1-228ENST00000498814 PDCP20941 246 aa17.65■□□□□ 0.42
CPNE1-228ENST00000498814 MLLT1Q03111 559 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-228ENST00000498814 GNL2Q13823 731 aaKnown RBP17.65■□□□□ 0.42
CPNE1-228ENST00000498814 SNX17Q15036 470 aa17.65■□□□□ 0.42
CPNE1-228ENST00000498814 C1orf53Q5VUE5 145 aa17.65■□□□□ 0.42
CPNE1-228ENST00000498814 NOSTRINQ8IVI9 506 aa17.65■□□□□ 0.42
CPNE1-228ENST00000498814 GPR20Q99678 358 aa17.65■□□□□ 0.42
CPNE1-228ENST00000498814 MTG1Q9BT17 334 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-228ENST00000498814 JPH1Q9HDC5 661 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-228ENST00000498814 TBC1D22BQ9NU19 505 aa17.65■□□□□ 0.42
CPNE1-228ENST00000498814 DDX25Q9UHL0 483 aaKnown RBP17.65■□□□□ 0.42
CPNE1-228ENST00000498814 TNRC18O15417 2968 aaPredicted RBP17.65■□□□□ 0.42
CPNE1-228ENST00000498814 PDE4DIPQ5VU43 2346 aa17.64■□□□□ 0.41
CPNE1-228ENST00000498814 KIF28PB7ZC32 967 aa17.64■□□□□ 0.41
CPNE1-228ENST00000498814 MSH4O15457 936 aa17.64■□□□□ 0.41
CPNE1-228ENST00000498814 DHX15O43143 795 aaKnown RBP17.64■□□□□ 0.41
CPNE1-228ENST00000498814 CCNT1O60563 726 aaKnown RBP17.64■□□□□ 0.41
CPNE1-228ENST00000498814 ATN1P54259 1190 aaPredicted RBP17.64■□□□□ 0.41
CPNE1-228ENST00000498814 LRRC26Q2I0M4 334 aa17.64■□□□□ 0.41
CPNE1-228ENST00000498814 VTI1AQ96AJ9 217 aa17.64■□□□□ 0.41
CPNE1-228ENST00000498814 SEZ6LQ9BYH1 1024 aa17.64■□□□□ 0.41
CPNE1-228ENST00000498814 SLC9A2Q9UBY0 812 aa17.64■□□□□ 0.41
CPNE1-228ENST00000498814 WDR81Q562E7 1941 aa17.64■□□□□ 0.41
CPNE1-228ENST00000498814 A0A0U1RQG5 324 aaPredicted RBP17.63■□□□□ 0.41
CPNE1-228ENST00000498814 SLC43A3Q8NBI5 491 aa17.63■□□□□ 0.41
CPNE1-228ENST00000498814 SEPT1Q8WYJ6 367 aa17.63■□□□□ 0.41
CPNE1-228ENST00000498814 SLC5A5Q92911 643 aa17.63■□□□□ 0.41
CPNE1-228ENST00000498814 RIT2Q99578 217 aa17.63■□□□□ 0.41
CPNE1-228ENST00000498814 FOXD4L1Q9NU39 408 aa17.63■□□□□ 0.41
CPNE1-228ENST00000498814 TELO2Q9Y4R8 837 aa17.63■□□□□ 0.41
CPNE1-228ENST00000498814 GSTTP1A0A1W2PQM5 241 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 ARVCFO00192 962 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 SLC37A4O43826 429 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 F2P00734 622 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 TRAPPC10P48553 1259 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 CDK7P50613 346 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 SP4Q02446 784 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 ITGA7Q13683 1181 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 MCTP1Q6DN14 999 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 ETNPPLQ8TBG4 499 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 KAT2BQ92831 832 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 C16orf70Q9BSU1 422 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 KCNMB3Q9NPA1 279 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 GRIN2DO15399 1336 aa17.62■□□□□ 0.41
CPNE1-228ENST00000498814 MYH9P35579 1960 aaKnown RBP17.61■□□□□ 0.41
CPNE1-228ENST00000498814 TBX3O15119 743 aa17.61■□□□□ 0.41
CPNE1-228ENST00000498814 ATG7O95352 703 aa17.61■□□□□ 0.41
CPNE1-228ENST00000498814 LGALS2P05162 132 aa17.61■□□□□ 0.41
CPNE1-228ENST00000498814 HSP90AA1P07900 732 aaKnown RBP17.61■□□□□ 0.41
CPNE1-228ENST00000498814 TCF7P36402 384 aaPredicted RBP17.61■□□□□ 0.41
CPNE1-228ENST00000498814 ACTR2P61160 394 aa17.61■□□□□ 0.41
CPNE1-228ENST00000498814 PSMC6P62333 389 aa17.61■□□□□ 0.41
CPNE1-228ENST00000498814 FAM20AQ96MK3 541 aa17.61■□□□□ 0.41
CPNE1-228ENST00000498814 UIMC1Q96RL1 719 aa17.61■□□□□ 0.41
CPNE1-228ENST00000498814 KATNAL1Q9BW62 490 aa17.61■□□□□ 0.41
CPNE1-228ENST00000498814 NOL7Q9UMY1 257 aaKnown RBP17.61■□□□□ 0.41
CPNE1-228ENST00000498814 KAT6AQ92794 2004 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 DDX39AO00148 427 aaKnown RBP17.6■□□□□ 0.41
CPNE1-228ENST00000498814 HAS3O00219 553 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 EVI5O60447 810 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 GAS7O60861 476 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 PSMD10O75832 226 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 CCNE2O96020 404 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 ZNF286BP0CG31 522 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 SYT1P21579 422 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 RTP1P59025 263 aa17.6■□□□□ 0.41
CPNE1-228ENST00000498814 KRT76Q01546 638 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms