RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 PRR16Q569H4 304 aa19.06■□□□□ 0.64
PRKCB-210ENST00000498739 PIK3AP1Q6ZUJ8 805 aa19.06■□□□□ 0.64
PRKCB-210ENST00000498739 AGO4Q9HCK5 861 aaKnown RBP19.06■□□□□ 0.64
PRKCB-210ENST00000498739 KIF3AQ9Y496 699 aa19.06■□□□□ 0.64
PRKCB-210ENST00000498739 BTBD18B2RXH4 712 aa19.05■□□□□ 0.64
PRKCB-210ENST00000498739 EDIL3O43854 480 aa19.05■□□□□ 0.64
PRKCB-210ENST00000498739 GJB2P29033 226 aa19.05■□□□□ 0.64
PRKCB-210ENST00000498739 CHMP4BP1P59074 171 aa19.05■□□□□ 0.64
PRKCB-210ENST00000498739 ITGA7Q13683 1181 aa19.05■□□□□ 0.64
PRKCB-210ENST00000498739 SAFBQ15424 915 aaKnown RBP eCLIP19.05■□□□□ 0.643e-6■■■□□ 15
PRKCB-210ENST00000498739 C1orf53Q5VUE5 145 aa19.05■□□□□ 0.64
PRKCB-210ENST00000498739 SDF4Q9BRK5 362 aa19.05■□□□□ 0.64
PRKCB-210ENST00000498739 SMC3Q9UQE7 1217 aa19.05■□□□□ 0.64
PRKCB-210ENST00000498739 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.05■□□□□ 0.64
PRKCB-210ENST00000498739 NR2E3Q9Y5X4 410 aa19.05■□□□□ 0.64
PRKCB-210ENST00000498739 ALPK3Q96L96 1907 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 ARVCFO00192 962 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 PQBP1O60828 265 aaKnown RBP19.04■□□□□ 0.64
PRKCB-210ENST00000498739 PPFIA4O75335 1185 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 TDP2O95551 362 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 ZNF286BP0CG31 522 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 LETM2Q2VYF4 491 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 EARS2Q5JPH6 523 aaKnown RBP19.04■□□□□ 0.64
PRKCB-210ENST00000498739 NEK8Q86SG6 692 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 FBXO18Q8NFZ0 1043 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 TNFRSF25Q93038 417 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 UIMC1Q96RL1 719 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 GPR20Q99678 358 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 ZNF577Q9BSK1 485 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 TELO2Q9Y4R8 837 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 MYH7BA7E2Y1 1941 aa19.04■□□□□ 0.64
PRKCB-210ENST00000498739 GRIN2DO15399 1336 aa19.03■□□□□ 0.64
PRKCB-210ENST00000498739 NFASCO94856 1347 aa19.03■□□□□ 0.64
PRKCB-210ENST00000498739 FAM205CA6NFA0 338 aa19.03■□□□□ 0.64
PRKCB-210ENST00000498739 K7ELQ4 463 aaPredicted RBP19.03■□□□□ 0.64
PRKCB-210ENST00000498739 DDX39AO00148 427 aaKnown RBP19.03■□□□□ 0.64
PRKCB-210ENST00000498739 TLE2Q04725 743 aa19.03■□□□□ 0.64
PRKCB-210ENST00000498739 ITGB3BPQ13352 177 aaPredicted RBP19.03■□□□□ 0.64
PRKCB-210ENST00000498739 CUL4AQ13619 759 aa19.03■□□□□ 0.64
PRKCB-210ENST00000498739 JPH1Q9HDC5 661 aaPredicted RBP19.03■□□□□ 0.64
PRKCB-210ENST00000498739 SLC9A2Q9UBY0 812 aa19.03■□□□□ 0.64
PRKCB-210ENST00000498739 MROH7Q68CQ1 1323 aa19.02■□□□□ 0.64
PRKCB-210ENST00000498739 MKI67P46013 3256 aaKnown RBP19.02■□□□□ 0.64
PRKCB-210ENST00000498739 IPO5O00410 1097 aaKnown RBP19.02■□□□□ 0.64
PRKCB-210ENST00000498739 HOXD8P13378 290 aaPredicted RBP19.02■□□□□ 0.64
PRKCB-210ENST00000498739 CDK7P50613 346 aa19.02■□□□□ 0.64
PRKCB-210ENST00000498739 GNL2Q13823 731 aaKnown RBP19.02■□□□□ 0.64
PRKCB-210ENST00000498739 NBPF20Q3BBV1 942 aa19.02■□□□□ 0.64
PRKCB-210ENST00000498739 FAM47CQ5HY64 1035 aa19.02■□□□□ 0.64
PRKCB-210ENST00000498739 UTP14CQ5TAP6 766 aaKnown RBP19.02■□□□□ 0.64
PRKCB-210ENST00000498739 MOXD1Q6UVY6 613 aa19.02■□□□□ 0.64
PRKCB-210ENST00000498739 PPP1R13LQ8WUF5 828 aa19.02■□□□□ 0.64
PRKCB-210ENST00000498739 KAT2BQ92831 832 aa19.02■□□□□ 0.64
PRKCB-210ENST00000498739 LENG9Q96B70 501 aa19.02■□□□□ 0.64
PRKCB-210ENST00000498739 KATNAL1Q9BW62 490 aa19.02■□□□□ 0.64
PRKCB-210ENST00000498739 ZMYND8Q9ULU4 1186 aaPredicted RBP19.02■□□□□ 0.64
PRKCB-210ENST00000498739 DOCK5Q9H7D0 1870 aa19.02■□□□□ 0.64
PRKCB-210ENST00000498739 CYP3A7-CYP3A51PA0A087WV96 503 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 DCDC2CA8MYV0 355 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 CCNT1O60563 726 aaKnown RBP19.01■□□□□ 0.63
PRKCB-210ENST00000498739 F2P00734 622 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 LGALS2P05162 132 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 SYN1P17600 705 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 CYP3A7P24462 503 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 TCF7P36402 384 aaPredicted RBP19.01■□□□□ 0.63
PRKCB-210ENST00000498739 PSEN2P49810 448 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 Q4G0T1 1027 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 ANKRD33Q7Z3H0 272 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 SLC43A3Q8NBI5 491 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 SEPT1Q8WYJ6 367 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 SNX21Q969T3 373 aa19.01■□□□□ 0.63
PRKCB-210ENST00000498739 PRDM5Q9NQX1 630 aaPredicted RBP19.01■□□□□ 0.63
PRKCB-210ENST00000498739 DDX25Q9UHL0 483 aaKnown RBP19.01■□□□□ 0.63
PRKCB-210ENST00000498739 TNRC18O15417 2968 aaPredicted RBP19■□□□□ 0.63
PRKCB-210ENST00000498739 GSTTP1A0A1W2PQM5 241 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 H0YGN5 161 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 TLR3O15455 904 aaKnown RBP19■□□□□ 0.63
PRKCB-210ENST00000498739 MSH4O15457 936 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 MFSD10Q14728 455 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 HSCBQ8IWL3 235 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 FAM126BQ8IXS8 530 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 TOX2Q96NM4 488 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 NAP1L4Q99733 375 aaKnown RBP19■□□□□ 0.63
PRKCB-210ENST00000498739 C16orf70Q9BSU1 422 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 SEZ6LQ9BYH1 1024 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 TBC1D22BQ9NU19 505 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 PRKAG2Q9UGJ0 569 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 TCEAL9Q9UHQ7 104 aa19■□□□□ 0.63
PRKCB-210ENST00000498739 DHX15O43143 795 aaKnown RBP18.99■□□□□ 0.63
PRKCB-210ENST00000498739 SLC37A4O43826 429 aa18.99■□□□□ 0.63
PRKCB-210ENST00000498739 CLTBP09497 229 aa18.99■□□□□ 0.63
PRKCB-210ENST00000498739 GCFC2P16383 781 aaKnown RBP18.99■□□□□ 0.63
PRKCB-210ENST00000498739 ACTR2P61160 394 aa18.99■□□□□ 0.63
PRKCB-210ENST00000498739 FAAP100Q0VG06 881 aa18.99■□□□□ 0.63
PRKCB-210ENST00000498739 KIAA0753Q2KHM9 967 aa18.99■□□□□ 0.63
PRKCB-210ENST00000498739 PPP4R3AQ6IN85 833 aa18.99■□□□□ 0.63
PRKCB-210ENST00000498739 TRIM50Q86XT4 487 aa18.99■□□□□ 0.63
PRKCB-210ENST00000498739 MBOAT7Q96N66 472 aa18.99■□□□□ 0.63
PRKCB-210ENST00000498739 FOXP1Q9H334 677 aaPredicted RBP18.99■□□□□ 0.63
PRKCB-210ENST00000498739 PDLIM7Q9NR12 457 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms