RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 METTL16Q86W50 562 aaKnown RBP6.71□□□□□ -1.34
SPTA1-209ENST00000498708 SUGP1Q8IWZ8 645 aaKnown RBP6.71□□□□□ -1.34
SPTA1-209ENST00000498708 ABRAQ8N0Z2 381 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 FBXL6Q8N531 539 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 TMEM57Q8N5G2 664 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 MIGA1Q8NAN2 632 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 SLC43A3Q8NBI5 491 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 SHCBP1Q8NEM2 672 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 FEZ1Q99689 392 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 FSD1Q9BTV5 496 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 UPF3BQ9BZI7 483 aaKnown RBP6.71□□□□□ -1.34
SPTA1-209ENST00000498708 MROH8Q9H579 483 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 PIH1D3Q9NQM4 214 aaKnown RBP6.71□□□□□ -1.34
SPTA1-209ENST00000498708 TLR7Q9NYK1 1049 aaKnown RBP6.71□□□□□ -1.34
SPTA1-209ENST00000498708 PRKAG3Q9UGI9 489 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 MTUS1Q9ULD2 1270 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 FPGT-TNNI3KV9GXZ4 949 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 MAP1BP46821 2468 aaKnown RBP6.71□□□□□ -1.34
SPTA1-209ENST00000498708 FLT1P17948 1338 aa6.71□□□□□ -1.34
SPTA1-209ENST00000498708 MCM3APO60318 1980 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 MSTNO14793 375 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 IPO8O15397 1037 aaKnown RBP6.7□□□□□ -1.34
SPTA1-209ENST00000498708 B4GALT4O60513 344 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 DUSP11O75319 330 aaKnown RBP6.7□□□□□ -1.34
SPTA1-209ENST00000498708 IDH1O75874 414 aaKnown RBP6.7□□□□□ -1.34
SPTA1-209ENST00000498708 SNAI1O95863 264 aaPredicted RBP6.7□□□□□ -1.34
SPTA1-209ENST00000498708 FCER1AP12319 257 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 BMP4P12644 408 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 CYP7A1P22680 504 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 USP5P45974 858 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 BEX3Q00994 111 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 UBAP2LQ14157 1087 aaKnown RBP6.7□□□□□ -1.34
SPTA1-209ENST00000498708 KCTD2Q14681 263 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 COG2Q14746 738 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 PKN1Q16512 942 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 ATF7IPQ6VMQ6 1270 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 NLRP8Q86W28 1048 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 FOXP4Q8IVH2 680 aaPredicted RBP6.7□□□□□ -1.34
SPTA1-209ENST00000498708 PLPP7Q8NBV4 271 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 GALNT6Q8NCL4 622 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 PHOSPHO2Q8TCD6 241 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 ARHGAP45Q92619 1136 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 RMDN1Q96DB5 314 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 SLC9A7Q96T83 725 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 KIAA1683Q9H0B3 1180 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 DHX36Q9H2U1 1008 aaKnown RBP6.7□□□□□ -1.34
SPTA1-209ENST00000498708 GINM1Q9NU53 330 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 FAM184BQ9ULE4 1060 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 MKL2Q9ULH7 1088 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 COL11A1P12107 1806 aaPredicted RBP6.7□□□□□ -1.34
SPTA1-209ENST00000498708 MYO7AQ13402 2215 aa6.7□□□□□ -1.34
SPTA1-209ENST00000498708 SIP14410 1827 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 KIF28PB7ZC32 967 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 PIK3R2O00459 728 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 MAP4K4O95819 1239 aaPredicted RBP6.69□□□□□ -1.34
SPTA1-209ENST00000498708 HLA-DOAP06340 250 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 FGFR3P22607 806 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 AVPR2P30518 371 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 PLA2G4AP47712 749 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 SMTNP53814 917 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 GJA9P57773 515 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 ATP8B2P98198 1209 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 RAB3GAP1Q15042 981 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 KIAA1755Q5JYT7 1200 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 CXCL17Q6UXB2 119 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 EP400NLQ6ZTU2 488 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 ADSSL1Q8N142 457 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 MAGEB6Q8N7X4 407 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 PCSK9Q8NBP7 692 aaKnown RBP6.69□□□□□ -1.34
SPTA1-209ENST00000498708 MMP19Q99542 508 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 IRF2BPLQ9H1B7 796 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 UPF3AQ9H1J1 476 aaKnown RBP6.69□□□□□ -1.34
SPTA1-209ENST00000498708 ANTXR1Q9H6X2 564 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 HOXC10Q9NYD6 342 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 ZHX1Q9UKY1 873 aaPredicted RBP6.69□□□□□ -1.34
SPTA1-209ENST00000498708 CNPY2Q9Y2B0 182 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 PCDHGC4Q9Y5F7 938 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 GTF3C3Q9Y5Q9 886 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 ASPMQ8IZT6 3477 aa6.69□□□□□ -1.34
SPTA1-209ENST00000498708 EP300Q09472 2414 aaPredicted RBP6.68□□□□□ -1.34
SPTA1-209ENST00000498708 MPHOSPH10O00566 681 aaKnown RBP6.68□□□□□ -1.34
SPTA1-209ENST00000498708 BNIP3LO60238 219 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 STAU1O95793 577 aaKnown RBP6.68□□□□□ -1.34
SPTA1-209ENST00000498708 CYP2C9P11712 490 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 PTGS1P23219 599 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 LTBRP36941 435 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 USP14P54578 494 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 ERVK-21P61565 698 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 PSMC6P62333 389 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 ZXDAP98168 799 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 ITGA7Q13683 1181 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 MCM6Q14566 821 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 TMEM132BQ14DG7 1078 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 CLUL1Q15846 466 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 PLA2G4EQ3MJ16 856 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 ZKSCAN2Q63HK3 967 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 SLCO4C1Q6ZQN7 724 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 DGLUCYQ7Z3D6 616 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 ITPRIPQ8IWB1 547 aa6.68□□□□□ -1.34
SPTA1-209ENST00000498708 EDARADDQ8WWZ3 215 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms