RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ZC3H7AQ8IWR0 971 aaKnown RBP4.26□□□□□ -1.73
RIF1-212ENST00000498041 TRIM48Q8IWZ4 208 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 FAM126BQ8IXS8 530 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 NLGN1Q8N2Q7 840 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 SYNPOQ8N3V7 929 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 PCDH19Q8TAB3 1148 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 FBXW5Q969U6 566 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 YIPF4Q9BSR8 244 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 NGRNQ9NPE2 291 aaKnown RBP4.26□□□□□ -1.73
RIF1-212ENST00000498041 MYOTQ9UBF9 498 aa4.26□□□□□ -1.73
RIF1-212ENST00000498041 RAPGEF3O95398 923 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 ASMTLO95671 621 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 SRGAP2CP0DJJ0 459 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 SYN1P17600 705 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 MC3RP41968 323 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 LIMS1P48059 325 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 ST5P78524 1137 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 FAM47CQ5HY64 1035 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 HABP4Q5JVS0 413 aaKnown RBP4.25□□□□□ -1.73
RIF1-212ENST00000498041 TCERG1LQ5VWI1 586 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 C16orf59Q7L2K0 433 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 BRAPQ7Z569 592 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 ZC3H18Q86VM9 953 aaKnown RBP4.25□□□□□ -1.73
RIF1-212ENST00000498041 FAM129CQ86XR2 697 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 TMEM151BQ8IW70 566 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 ZDHHC14Q8IZN3 488 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 ARRDC4Q8NCT1 418 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 SMARCC2Q8TAQ2 1214 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 UHMK1Q8TAS1 419 aaKnown RBP4.25□□□□□ -1.73
RIF1-212ENST00000498041 PANK1Q8TE04 598 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 APPBP2Q92624 585 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 DDX11Q96FC9 970 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 SCLYQ96I15 445 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 PCDH18Q9HCL0 1135 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 EPB41L4AQ9HCS5 686 aaPredicted RBP4.25□□□□□ -1.73
RIF1-212ENST00000498041 CATSPERZQ9NTU4 200 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 ASH2LQ9UBL3 628 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 DSEQ9UL01 958 aa4.25□□□□□ -1.73
RIF1-212ENST00000498041 MRPL42Q9Y6G3 142 aaKnown RBP4.25□□□□□ -1.73
RIF1-212ENST00000498041 PPP1R12AO14974 1030 aaPredicted RBP4.24□□□□□ -1.73
RIF1-212ENST00000498041 SLC27A2O14975 620 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 NKRFO15226 690 aaKnown RBP eCLIP4.24□□□□□ -1.73
RIF1-212ENST00000498041 RASGRP1O95267 797 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 CYP2C8P10632 490 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 PYGMP11217 842 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 NKX3-2P78367 333 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 TCEA2Q15560 299 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 GPR19Q15760 415 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 VMACQ2NL98 169 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 CD300LDQ6UXZ3 194 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 PRRT2Q7Z6L0 340 aaPredicted RBP4.24□□□□□ -1.73
RIF1-212ENST00000498041 JAZF1Q86VZ6 243 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 DACT3Q96B18 629 aaPredicted RBP4.24□□□□□ -1.73
RIF1-212ENST00000498041 TOE1Q96GM8 510 aaKnown RBP4.24□□□□□ -1.73
RIF1-212ENST00000498041 PWWP2AQ96N64 755 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 CLUHP3Q96NS8 147 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 TRIM39Q9HCM9 518 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 FANCLQ9NW38 375 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 DTLQ9NZJ0 730 aa4.24□□□□□ -1.73
RIF1-212ENST00000498041 TCRBV16S1A1N1A0A5B0 115 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 CCDC66A2RUB6 948 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 RFPL3O75679 317 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 NPTXRO95502 500 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 C8BP07358 591 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 STAT5AP42229 794 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 DNM2P50570 870 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 AFF3P51826 1226 aaKnown RBP4.23□□□□□ -1.73
RIF1-212ENST00000498041 EPHA5P54756 1037 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 CAP1Q01518 475 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 TUSC3Q13454 348 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 CRY1Q16526 586 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 ARHGAP36Q6ZRI8 547 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 C16orf86Q6ZW13 317 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 FGD2Q7Z6J4 655 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.23□□□□□ -1.73
RIF1-212ENST00000498041 OSTM1Q86WC4 334 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 NLGN4XQ8N0W4 816 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 FAM26EQ8N5C1 309 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 TTLL11Q8NHH1 800 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 CLEC4DQ8WXI8 215 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 PDGFDQ9GZP0 370 aaPredicted RBP4.23□□□□□ -1.73
RIF1-212ENST00000498041 CBLCQ9ULV8 474 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 PMF1-BGLAPU3KQ54 211 aa4.23□□□□□ -1.73
RIF1-212ENST00000498041 TCRBV5S4A2TA0A5A2 114 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 TLDC2A0PJX2 215 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 B4E1Z4 1266 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 TRIM13O60858 407 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 CDC45O75419 566 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 LRG1P02750 347 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 PLA2G1BP04054 148 aaKnown RBP4.22□□□□□ -1.73
RIF1-212ENST00000498041 ASLP04424 464 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 CKMP06732 381 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 PDE6AP16499 860 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 HTRA3P83110 453 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 LACTBP83111 547 aaPredicted RBP4.22□□□□□ -1.73
RIF1-212ENST00000498041 GRIN1Q05586 938 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 PABPC4Q13310 644 aaKnown RBP eCLIP4.22□□□□□ -1.73
RIF1-212ENST00000498041 CR1LQ2VPA4 569 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 TEPPQ6URK8 271 aa4.22□□□□□ -1.73
RIF1-212ENST00000498041 DBX2Q6ZNG2 339 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms