RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 ARHGAP1Q07960 439 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 RABEP1Q15276 862 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 GNPTABQ3T906 1256 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 C1orf53Q5VUE5 145 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 KCNV1Q6PIU1 500 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 FAM177A1Q8N128 213 aaPredicted RBP12.87□□□□□ -0.35
ERCC8-208ENST00000497892 REXO1Q8N1G1 1221 aaKnown RBP12.87□□□□□ -0.35
ERCC8-208ENST00000497892 NECAB1Q8N987 351 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 DPF3Q92784 378 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 COPS5Q92905 334 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 EMID1Q96A84 441 aaPredicted RBP12.87□□□□□ -0.35
ERCC8-208ENST00000497892 BACH2Q9BYV9 841 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 EHMT1Q9H9B1 1298 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 C6orf50Q9HD87 102 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 VPS54Q9P1Q0 977 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 LIMCH1Q9UPQ0 1083 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 MYH7BA7E2Y1 1941 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
ERCC8-208ENST00000497892 A6NJR5 290 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 FIBPO43427 364 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 TGFB3P10600 412 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 UBA1P22314 1058 aaKnown RBP12.86□□□□□ -0.35
ERCC8-208ENST00000497892 GNA11P29992 359 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 ICAM3P32942 547 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 SREBF1P36956 1147 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 ST3GAL1Q11201 340 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 LY6KQ17RY6 165 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 MCTP2Q6DN12 878 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 CXCL17Q6UXB2 119 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 SLC39A5Q6ZMH5 540 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 IL27Q8NEV9 243 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 GLT1D1Q96MS3 346 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 AIFM3Q96NN9 605 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 ANO3Q9BYT9 981 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 STARD7Q9NQZ5 370 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 TMEM260Q9NX78 707 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 NR2E3Q9Y5X4 410 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 SCN10AQ9Y5Y9 1956 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 ELP1O95163 1332 aa12.86□□□□□ -0.35
ERCC8-208ENST00000497892 SPATA31C2B4DYI2 1134 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 ADAMTS3O15072 1205 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 ZEB2O60315 1214 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 CABYRO75952 493 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 RTP1P59025 263 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 SEMA3FQ13275 785 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 PRPF38BQ5VTL8 546 aaKnown RBP12.85□□□□□ -0.35
ERCC8-208ENST00000497892 C7orf61Q8IZ16 206 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 NSUN7Q8NE18 718 aaKnown RBP12.85□□□□□ -0.35
ERCC8-208ENST00000497892 BICD2Q8TD16 824 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 CRYGNQ8WXF5 182 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 GPRASP2Q96D09 838 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 PGBD1Q96JS3 809 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 POLR3EQ9NVU0 708 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 PLA2G2EQ9NZK7 142 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 LTBP2Q14767 1821 aa12.85□□□□□ -0.35
ERCC8-208ENST00000497892 H0YGN5 161 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 MMP3P08254 477 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 ITGB5P18084 799 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 PURAQ00577 322 aaKnown RBP12.84□□□□□ -0.35
ERCC8-208ENST00000497892 SP2Q02086 613 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 LAMC2Q13753 1193 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 TRIM60Q495X7 471 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 BRDTQ58F21 947 aaPredicted RBP12.84□□□□□ -0.35
ERCC8-208ENST00000497892 MYSM1Q5VVJ2 828 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 JAKMIP3Q5VZ66 844 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 NLRX1Q86UT6 975 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 DAGLBQ8NCG7 672 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 AFG1LQ8WV93 481 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 CDHR1Q96JP9 859 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 SH2B1Q9NRF2 756 aaPredicted RBP12.84□□□□□ -0.35
ERCC8-208ENST00000497892 RTEL1Q9NZ71 1219 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 ORC3Q9UBD5 711 aaPredicted RBP12.84□□□□□ -0.35
ERCC8-208ENST00000497892 UBIAD1Q9Y5Z9 338 aa12.84□□□□□ -0.35
ERCC8-208ENST00000497892 A0A0U1RQG5 324 aaPredicted RBP12.83□□□□□ -0.36
ERCC8-208ENST00000497892 KPNA6O60684 536 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 DTNBO60941 627 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 GGPS1O95749 300 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 HOXD8P13378 290 aaPredicted RBP12.83□□□□□ -0.36
ERCC8-208ENST00000497892 FDPSP14324 419 aaKnown RBP12.83□□□□□ -0.36
ERCC8-208ENST00000497892 NLRP5P59047 1200 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 ARHGAP4P98171 946 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 MTMR1Q13613 665 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 NPY5RQ15761 445 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 CELF3Q5SZQ8 465 aaKnown RBP12.83□□□□□ -0.36
ERCC8-208ENST00000497892 GALNT17Q6IS24 598 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 ANKRD33Q7Z3H0 272 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 DHX37Q8IY37 1157 aaKnown RBP12.83□□□□□ -0.36
ERCC8-208ENST00000497892 PPTC7Q8NI37 304 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 RASGRP4Q8TDF6 673 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 WASF1Q92558 559 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 ZSCAN31Q96LW9 406 aaPredicted RBP12.83□□□□□ -0.36
ERCC8-208ENST00000497892 JADE2Q9NQC1 790 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 PCDHA4Q9UN74 947 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 ATP11BQ9Y2G3 1177 aa12.83□□□□□ -0.36
ERCC8-208ENST00000497892 RANBP2P49792 3224 aaKnown RBP12.82□□□□□ -0.36
ERCC8-208ENST00000497892 M0R2N6 131 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 DPYSL4O14531 572 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 JAK2O60674 1132 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 MYL3P08590 195 aa12.82□□□□□ -0.36
ERCC8-208ENST00000497892 XBP1P17861 261 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms