RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 TXNDC5Q8NBS9 432 aaKnown RBP5□□□□□ -1.61
PSPC1-205ENST00000497722 SLC16A11Q8NCK7 471 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 TTLL11Q8NHH1 800 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 PMFBP1Q8TBY8 1022 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 PHOSPHO1Q8TCT1 267 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 ZNF669Q96BR6 464 aaPredicted RBP5□□□□□ -1.61
PSPC1-205ENST00000497722 MBD6Q96DN6 1003 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 TOE1Q96GM8 510 aaKnown RBP5□□□□□ -1.61
PSPC1-205ENST00000497722 SORCS2Q96PQ0 1159 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 HIRIP3Q9BW71 556 aaPredicted RBP5□□□□□ -1.61
PSPC1-205ENST00000497722 KRTAP3-1Q9BYR8 98 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 SLC6A20Q9NP91 592 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 ASH2LQ9UBL3 628 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 PCDHB4Q9Y5E5 795 aa5□□□□□ -1.61
PSPC1-205ENST00000497722 DGKIO75912 1065 aa4.99□□□□□ -1.61
PSPC1-205ENST00000497722 PABPC1P11940 636 aaKnown RBP4.99□□□□□ -1.61
PSPC1-205ENST00000497722 TBC1D10BQ4KMP7 808 aaPredicted RBP4.99□□□□□ -1.61
PSPC1-205ENST00000497722 LBX2Q6XYB7 198 aa4.99□□□□□ -1.61
PSPC1-205ENST00000497722 YTHDC1Q96MU7 727 aaKnown RBP4.99□□□□□ -1.61
PSPC1-205ENST00000497722 AARSD1Q9BTE6 412 aaKnown RBP4.99□□□□□ -1.61
PSPC1-205ENST00000497722 PHF20Q9BVI0 1012 aa4.99□□□□□ -1.61
PSPC1-205ENST00000497722 JAM3Q9BX67 310 aa4.99□□□□□ -1.61
PSPC1-205ENST00000497722 MYOTQ9UBF9 498 aa4.99□□□□□ -1.61
PSPC1-205ENST00000497722 MROH6A6NGR9 719 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 C9orf118A6NHY6 69 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 DDX3XO00571 662 aaKnown RBP eCLIP4.98□□□□□ -1.61
PSPC1-205ENST00000497722 COL6A1P12109 1028 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 HMGA2P52926 109 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 MLLT6P55198 1093 aaPredicted RBP4.98□□□□□ -1.61
PSPC1-205ENST00000497722 YOD1Q5VVQ6 348 aaPredicted RBP4.98□□□□□ -1.61
PSPC1-205ENST00000497722 MCTP2Q6DN12 878 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 STYK1Q6J9G0 422 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 PKN3Q6P5Z2 889 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 KCNT2Q6UVM3 1135 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 USP53Q70EK8 1073 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 OTOP3Q7RTS5 596 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 PIP4K2CQ8TBX8 421 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 DCAF4Q8WV16 495 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 CLEC4DQ8WXI8 215 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 ZCCHC14Q8WYQ9 949 aaKnown RBP4.98□□□□□ -1.61
PSPC1-205ENST00000497722 CHAMP1Q96JM3 812 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 ZFYVE21Q9BQ24 234 aa4.98□□□□□ -1.61
PSPC1-205ENST00000497722 ASXL2Q76L83 1435 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 IQCA1LA6NCM1 817 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 CCDC85CA6NKD9 419 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 MATN3O15232 486 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 PRODHO43272 600 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 ADCY3O60266 1144 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 B4GALT3O60512 393 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 PLATP00750 562 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 FSHBP01225 129 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 IL13P35225 146 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 KIAA2012Q0VF49 1180 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 SOGA3Q5TF21 947 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 UHMK1Q8TAS1 419 aaKnown RBP4.97□□□□□ -1.61
PSPC1-205ENST00000497722 DNAJC2Q99543 621 aaKnown RBP4.97□□□□□ -1.61
PSPC1-205ENST00000497722 MENTQ9BUN1 341 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 RBPJLQ9UBG7 517 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 INVSQ9Y283 1065 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 TELO2Q9Y4R8 837 aa4.97□□□□□ -1.61
PSPC1-205ENST00000497722 MAGEA10P43363 369 aaPredicted RBP4.96□□□□□ -1.62
PSPC1-205ENST00000497722 EPHA5P54756 1037 aa4.96□□□□□ -1.62
PSPC1-205ENST00000497722 GPR85P60893 370 aa4.96□□□□□ -1.62
PSPC1-205ENST00000497722 NSMFQ6X4W1 530 aa4.96□□□□□ -1.62
PSPC1-205ENST00000497722 LGI4Q8N135 537 aa4.96□□□□□ -1.62
PSPC1-205ENST00000497722 DTX3Q8N9I9 347 aa4.96□□□□□ -1.62
PSPC1-205ENST00000497722 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.96□□□□□ -1.62
PSPC1-205ENST00000497722 UBXN4Q92575 508 aa4.96□□□□□ -1.62
PSPC1-205ENST00000497722 TMEM209Q96SK2 561 aa4.96□□□□□ -1.62
PSPC1-205ENST00000497722 TRAV20A0A0B4J274 112 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 BLACEA4D250 179 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 KRIT1O00522 736 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 SLC27A2O14975 620 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 NKRFO15226 690 aaKnown RBP eCLIP4.95□□□□□ -1.62
PSPC1-205ENST00000497722 MAFKO60675 156 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 GRK2P25098 689 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 GRK3P35626 688 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 ADAM17P78536 824 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 KIZQ2M2Z5 673 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 SPATC1Q76KD6 591 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 TRIM48Q8IWZ4 208 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 RBM12BQ8IXT5 1001 aaKnown RBP4.95□□□□□ -1.62
PSPC1-205ENST00000497722 LRRC47Q8N1G4 583 aaKnown RBP4.95□□□□□ -1.62
PSPC1-205ENST00000497722 TTC9BQ8N6N2 239 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 ARMC5Q96C12 935 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 LCORQ96JN0 433 aaPredicted RBP4.95□□□□□ -1.62
PSPC1-205ENST00000497722 ZSWIM3Q96MP5 696 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 YIPF4Q9BSR8 244 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 SPATA9Q9BWV2 254 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 C1QTNF3Q9BXJ4 246 aa4.95□□□□□ -1.62
PSPC1-205ENST00000497722 TCRBV5S4A2TA0A5A2 114 aa4.94□□□□□ -1.62
PSPC1-205ENST00000497722 WNT9AO14904 365 aa4.94□□□□□ -1.62
PSPC1-205ENST00000497722 LTFP02788 710 aa4.94□□□□□ -1.62
PSPC1-205ENST00000497722 C6orf222P0C671 652 aaPredicted RBP4.94□□□□□ -1.62
PSPC1-205ENST00000497722 FAHP16930 419 aa4.94□□□□□ -1.62
PSPC1-205ENST00000497722 TUSC3Q13454 348 aa4.94□□□□□ -1.62
PSPC1-205ENST00000497722 RASGRF1Q13972 1273 aa4.94□□□□□ -1.62
PSPC1-205ENST00000497722 IFNL3Q8IZI9 196 aa4.94□□□□□ -1.62
PSPC1-205ENST00000497722 SH3RF2Q8TEC5 729 aa4.94□□□□□ -1.62
PSPC1-205ENST00000497722 SAMD11Q96NU1 681 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms