RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 P3H4Q92791 437 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 TRIM51Q9BSJ1 452 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 FAM129AQ9BZQ8 928 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 NUCKS1Q9H1E3 243 aaKnown RBP14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 SH3BP1Q9Y3L3 701 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 C4AP0C0L4 1744 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 C4BP0C0L5 1744 aa14.3□□□□□ -0.12
GAPVD1-220ENST00000497580 H0YGN5 161 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 PYGLP06737 847 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 KRT16P08779 473 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 POLE2P56282 527 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 SOGA3Q5TF21 947 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 NFS1Q9Y697 457 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 NRXN3Q9Y4C0 1643 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 ATP4AP20648 1035 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 PAPOLAP51003 745 aaKnown RBP14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 POLR2FP61218 127 aaKnown RBP14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 SLC9C1Q4G0N8 1177 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 EMC10Q5UCC4 262 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 DAAM2Q86T65 1068 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 LCORLQ8N3X6 602 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 GPKOWQ92917 476 aaPredicted RBP eCLIP14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 L3MBTL3Q96JM7 780 aaPredicted RBP14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 AZI2Q9H6S1 392 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 PIDD1Q9HB75 910 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 SLC5A4Q9NY91 659 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 CYP2D7A0A087X1C5 515 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 COPB2P35606 906 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 ABL2P42684 1182 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 TRAF1Q13077 416 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 VWA3BQ502W6 1294 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 CRELD2Q6UXH1 353 aaPredicted RBP14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 DYMQ7RTS9 669 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 PYM1Q9BRP8 204 aaKnown RBP14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 PPP1R12CQ9BZL4 782 aa14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 LUC7LQ9NQ29 371 aaKnown RBP14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 CORO1CQ9ULV4 474 aaPredicted RBP14.29□□□□□ -0.12
GAPVD1-220ENST00000497580 LRRD1A4D1F6 860 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 DPPA5A6NC42 116 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 CIAO1O76071 339 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 MTMR3Q13615 1198 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 OTUD6AQ7L8S5 288 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 INPP4AQ96PE3 977 aaPredicted RBP14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 RNF14Q9UBS8 474 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 PNMA3Q9UL41 463 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 SPDYE5A6NIY4 337 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 UBE3CQ15386 1083 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 ERMARDQ5T6L9 678 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 AGBL2Q5U5Z8 902 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 RGPD8O14715 1765 aaPredicted RBP14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 CFAP73A6NFT4 308 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 RGS16O15492 202 aaPredicted RBP14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 PCCAP05165 728 aaPredicted RBP14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 IFI35P80217 286 aaPredicted RBP14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 CUL1Q13616 776 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 LRRC41Q15345 812 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 NAALADL2Q58DX5 795 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 RPUSD2Q8IZ73 545 aaKnown RBP14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 ANKRD42Q8N9B4 389 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 GIMAP8Q8ND71 665 aaPredicted RBP14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 ERGIC2Q96RQ1 377 aa14.28□□□□□ -0.12
GAPVD1-220ENST00000497580 SRRM3A6NNA2 597 aaPredicted RBP14.27□□□□□ -0.12
GAPVD1-220ENST00000497580 SESN3P58005 492 aa14.27□□□□□ -0.12
GAPVD1-220ENST00000497580 NCALDP61601 193 aa14.27□□□□□ -0.12
GAPVD1-220ENST00000497580 LRP10Q7Z4F1 713 aa14.27□□□□□ -0.12
GAPVD1-220ENST00000497580 LONP2Q86WA8 852 aa14.27□□□□□ -0.12
GAPVD1-220ENST00000497580 TMTC2Q8N394 836 aa14.27□□□□□ -0.12
GAPVD1-220ENST00000497580 TEKT4Q8WW24 435 aa14.27□□□□□ -0.12
GAPVD1-220ENST00000497580 DHTKD1Q96HY7 919 aaPredicted RBP14.27□□□□□ -0.12
GAPVD1-220ENST00000497580 GSG1L2A8MUP6 293 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 KLRC4O43908 158 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 ECHS1P30084 290 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 ADCY1Q08828 1119 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 BLMHQ13867 455 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 SFMBT2Q5VUG0 894 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 FAM133AQ8N9E0 248 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 NAF1Q96HR8 494 aaKnown RBP14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 HOMER3Q9NSC5 361 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 SLC12A4Q9UP95 1085 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 CCDC194A0A1B0GVG4 234 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 HIP1RO75146 1068 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 PLCG1P19174 1290 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 CCND1P24385 295 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 RNASELQ05823 741 aaKnown RBP14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 LAMB3Q13751 1172 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 LSM14BQ9BX40 385 aaKnown RBP14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 NSRP1Q9H0G5 558 aaKnown RBP14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 TMEM60Q9H2L4 133 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 CNOT10Q9H9A5 744 aaKnown RBP14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 FGFR1OP2Q9NVK5 253 aa14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 NOC2LQ9Y3T9 749 aaKnown RBP14.27□□□□□ -0.13
GAPVD1-220ENST00000497580 F8VZ95 297 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 PDXDC1Q6P996 788 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 GIGYF2Q6Y7W6 1299 aaKnown RBP14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 TMC3Q7Z5M5 1100 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 KDM3BQ7LBC6 1761 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 A0A1B0GVG6 124 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 GRID2IPA4D2P6 1211 aa14.26□□□□□ -0.13
GAPVD1-220ENST00000497580 PLTPP55058 493 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms