RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 ZBTB7AO95365 584 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 F2P00734 622 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 POU3F3P20264 500 aaPredicted RBP6.76□□□□□ -1.33
VPS36-206ENST00000497149 IBSPP21815 317 aaPredicted RBP6.76□□□□□ -1.33
VPS36-206ENST00000497149 MAPKAPK2P49137 400 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 SCNN1BP51168 640 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 YBX1P67809 324 aaKnown RBP6.76□□□□□ -1.33
VPS36-206ENST00000497149 PRR5P85299 388 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 DHCR24Q15392 516 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 ARHGAP44Q17R89 818 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 MILR1Q7Z6M3 343 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 STRA8Q7Z7C7 330 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 PTRH1Q86Y79 214 aaKnown RBP6.76□□□□□ -1.33
VPS36-206ENST00000497149 ZNF552Q9H707 407 aaPredicted RBP6.76□□□□□ -1.33
VPS36-206ENST00000497149 B4GALT6Q9UBX8 382 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 ZNF652Q9Y2D9 606 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 HCFC2Q9Y5Z7 792 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 CARMIL2Q6F5E8 1435 aa6.76□□□□□ -1.33
VPS36-206ENST00000497149 MAN2B1O00754 1011 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 ABLIM1O14639 778 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 SLC27A2O14975 620 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 NFKB2Q00653 900 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 TMEM62Q0P6H9 643 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 SLC9A5Q14940 896 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 SKOR2Q2VWA4 1001 aaPredicted RBP6.75□□□□□ -1.33
VPS36-206ENST00000497149 MPZL3Q6UWV2 235 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 HHIPL2Q6UWX4 724 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 OTOP1Q7RTM1 612 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 RBM12BQ8IXT5 1001 aaKnown RBP6.75□□□□□ -1.33
VPS36-206ENST00000497149 NLGN4XQ8N0W4 816 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 NXPE1Q8N323 547 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 AFAP1L2Q8N4X5 818 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 PHOSPHO1Q8TCT1 267 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 LIN37Q96GY3 246 aaPredicted RBP6.75□□□□□ -1.33
VPS36-206ENST00000497149 FAM126AQ9BYI3 521 aaPredicted RBP6.75□□□□□ -1.33
VPS36-206ENST00000497149 MYOTQ9UBF9 498 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 SRPK3Q9UPE1 567 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 NOP58Q9Y2X3 529 aaKnown RBP6.75□□□□□ -1.33
VPS36-206ENST00000497149 NUB1Q9Y5A7 615 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 PCDHB4Q9Y5E5 795 aa6.75□□□□□ -1.33
VPS36-206ENST00000497149 TCRBV5S2A0A599 114 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 PTPDC1A2A3K4 754 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 KCNK3O14649 394 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 YBX3P16989 372 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS36-206ENST00000497149 EPHA5P54756 1037 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 DSG1Q02413 1049 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 PLEKHN1Q494U1 663 aaPredicted RBP6.74□□□□□ -1.33
VPS36-206ENST00000497149 ZC3H14Q6PJT7 736 aaKnown RBP6.74□□□□□ -1.33
VPS36-206ENST00000497149 EP400NLQ6ZTU2 488 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 KCTD1Q719H9 257 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 TRIM48Q8IWZ4 208 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 OR2W6PQ8NHA6 318 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 CLEC4DQ8WXI8 215 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 TSPAN17Q96FV3 270 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 CD244Q9BZW8 370 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS36-206ENST00000497149 ASH2LQ9UBL3 628 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 ZKSCAN5Q9Y2L8 839 aa6.74□□□□□ -1.33
VPS36-206ENST00000497149 SLC12A8A0AV02 714 aa6.73□□□□□ -1.33
VPS36-206ENST00000497149 ZNF891A8MT65 544 aaPredicted RBP6.73□□□□□ -1.33
VPS36-206ENST00000497149 HRKO00198 91 aa6.73□□□□□ -1.33
VPS36-206ENST00000497149 GAS7O60861 476 aa6.73□□□□□ -1.33
VPS36-206ENST00000497149 EYA4O95677 639 aa6.73□□□□□ -1.33
VPS36-206ENST00000497149 ZBTB48P10074 688 aaPredicted RBP6.73□□□□□ -1.33
VPS36-206ENST00000497149 STRN3Q13033 797 aa6.73□□□□□ -1.33
VPS36-206ENST00000497149 TUSC3Q13454 348 aa6.73□□□□□ -1.33
VPS36-206ENST00000497149 BOCQ9BWV1 1114 aa6.73□□□□□ -1.33
VPS36-206ENST00000497149 PDGFDQ9GZP0 370 aaPredicted RBP6.73□□□□□ -1.33
VPS36-206ENST00000497149 ATP8A1Q9Y2Q0 1164 aa6.73□□□□□ -1.33
VPS36-206ENST00000497149 TELO2Q9Y4R8 837 aa6.73□□□□□ -1.33
VPS36-206ENST00000497149 hCG_2014768A0A024R1R8 64 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 LTFP02788 710 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 ATP2A2P16615 1042 aaKnown RBP6.72□□□□□ -1.33
VPS36-206ENST00000497149 VIPR1P32241 457 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 SART3Q15020 963 aaKnown RBP6.72□□□□□ -1.33
VPS36-206ENST00000497149 FIGNQ5HY92 759 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 OLFML2BQ68BL8 750 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.72□□□□□ -1.33
VPS36-206ENST00000497149 ZNF605Q86T29 641 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 DDX42Q86XP3 938 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS36-206ENST00000497149 NOSTRINQ8IVI9 506 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 ARRDC4Q8NCT1 418 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 SMC1BQ8NDV3 1235 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 PUS7Q96PZ0 661 aaKnown RBP6.72□□□□□ -1.33
VPS36-206ENST00000497149 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 KRTAP9-4Q9BYQ2 154 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 FAM53CQ9NYF3 392 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 RNF114Q9Y508 228 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 ATP23Q9Y6H3 246 aa6.72□□□□□ -1.33
VPS36-206ENST00000497149 CLASP2O75122 1294 aaKnown RBP6.71□□□□□ -1.34
VPS36-206ENST00000497149 CPEP16870 476 aa6.71□□□□□ -1.34
VPS36-206ENST00000497149 BPIP17213 487 aa6.71□□□□□ -1.34
VPS36-206ENST00000497149 IGBP1P78318 339 aa6.71□□□□□ -1.34
VPS36-206ENST00000497149 PRR23BQ6ZRT6 265 aa6.71□□□□□ -1.34
VPS36-206ENST00000497149 TMC6Q7Z403 805 aa6.71□□□□□ -1.34
VPS36-206ENST00000497149 USP7Q93009 1102 aa6.71□□□□□ -1.34
VPS36-206ENST00000497149 TTC1Q99614 292 aa6.71□□□□□ -1.34
VPS36-206ENST00000497149 BCAS3Q9H6U6 928 aa6.71□□□□□ -1.34
VPS36-206ENST00000497149 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.71□□□□□ -1.34
VPS36-206ENST00000497149 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms