RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 SREK1Q8WXA9 508 aaKnown RBP6.54□□□□□ -1.36
TRIM4-205ENST00000496896 IPO9Q96P70 1041 aaKnown RBP6.54□□□□□ -1.36
TRIM4-205ENST00000496896 CDC6Q99741 560 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 YIPF4Q9BSR8 244 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 SNTG2Q9NY99 539 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 ASH2LQ9UBL3 628 aa6.54□□□□□ -1.36
TRIM4-205ENST00000496896 CCDC85CA6NKD9 419 aa6.53□□□□□ -1.36
TRIM4-205ENST00000496896 FAM47E-STBD1D6RA91 191 aa6.53□□□□□ -1.36
TRIM4-205ENST00000496896 SMARCA5O60264 1052 aaPredicted RBP6.53□□□□□ -1.36
TRIM4-205ENST00000496896 DIAPH1O60610 1272 aaKnown RBP6.53□□□□□ -1.36
TRIM4-205ENST00000496896 NAT1P18440 290 aa6.53□□□□□ -1.36
TRIM4-205ENST00000496896 RPL13P26373 211 aaKnown RBP6.53□□□□□ -1.36
TRIM4-205ENST00000496896 FAM26EQ8N5C1 309 aa6.53□□□□□ -1.36
TRIM4-205ENST00000496896 ARRDC4Q8NCT1 418 aa6.53□□□□□ -1.36
TRIM4-205ENST00000496896 UHMK1Q8TAS1 419 aaKnown RBP6.53□□□□□ -1.36
TRIM4-205ENST00000496896 TEPSINQ96N21 525 aa6.53□□□□□ -1.36
TRIM4-205ENST00000496896 ALG1Q9BT22 464 aa6.53□□□□□ -1.36
TRIM4-205ENST00000496896 JAM3Q9BX67 310 aa6.53□□□□□ -1.36
TRIM4-205ENST00000496896 PFDN2Q9UHV9 154 aa6.53□□□□□ -1.36
TRIM4-205ENST00000496896 SOD2P04179 222 aa6.52□□□□□ -1.37
TRIM4-205ENST00000496896 C6orf222P0C671 652 aaPredicted RBP6.52□□□□□ -1.37
TRIM4-205ENST00000496896 SARSP49591 514 aaKnown RBP6.52□□□□□ -1.37
TRIM4-205ENST00000496896 GABREP78334 506 aa6.52□□□□□ -1.37
TRIM4-205ENST00000496896 PRR31Q5SQ13 230 aa6.52□□□□□ -1.37
TRIM4-205ENST00000496896 TEPPQ6URK8 271 aa6.52□□□□□ -1.37
TRIM4-205ENST00000496896 FEZF2Q8TBJ5 459 aa6.52□□□□□ -1.37
TRIM4-205ENST00000496896 PIP4K2CQ8TBX8 421 aa6.52□□□□□ -1.37
TRIM4-205ENST00000496896 DHRS4Q9BTZ2 278 aa6.52□□□□□ -1.37
TRIM4-205ENST00000496896 PPARGC1AQ9UBK2 798 aaKnown RBP6.52□□□□□ -1.37
TRIM4-205ENST00000496896 KDM2BQ8NHM5 1336 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 ASXL2Q76L83 1435 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 CCDC163A0A0D9SF12 145 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 BLACEA4D250 179 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 FAM221BA6H8Z2 402 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 LRG1P02750 347 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 FAM153BP0C7A2 387 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 STAT5AP42229 794 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 EPHA5P54756 1037 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 SPATS1Q496A3 300 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 FAM209AQ5JX71 171 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 FAM26FQ5R3K3 315 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 ZFYVE27Q5T4F4 411 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 FOXB2Q5VYV0 432 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 SYT8Q8NBV8 401 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 KISS1RQ969F8 398 aaPredicted RBP6.51□□□□□ -1.37
TRIM4-205ENST00000496896 EXOC2Q96KP1 924 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 WRNIP1Q96S55 665 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 TMEM209Q96SK2 561 aa6.51□□□□□ -1.37
TRIM4-205ENST00000496896 A0A1B0GTL3 188 aa6.5□□□□□ -1.37
TRIM4-205ENST00000496896 NOBOXO60393 691 aa6.5□□□□□ -1.37
TRIM4-205ENST00000496896 CYP7B1O75881 506 aa6.5□□□□□ -1.37
TRIM4-205ENST00000496896 GNAT1P11488 350 aa6.5□□□□□ -1.37
TRIM4-205ENST00000496896 KRTAP1-1Q07627 177 aa6.5□□□□□ -1.37
TRIM4-205ENST00000496896 PAK1Q13153 545 aa6.5□□□□□ -1.37
TRIM4-205ENST00000496896 ADAM9Q13443 819 aa6.5□□□□□ -1.37
TRIM4-205ENST00000496896 SMAD4Q13485 552 aaKnown RBP6.5□□□□□ -1.37
TRIM4-205ENST00000496896 ZNF761Q86XN6 746 aaPredicted RBP6.5□□□□□ -1.37
TRIM4-205ENST00000496896 ADGRG2Q8IZP9 1017 aa6.5□□□□□ -1.37
TRIM4-205ENST00000496896 SRPK1Q96SB4 655 aaKnown RBP6.5□□□□□ -1.37
TRIM4-205ENST00000496896 SPATA25Q9BR10 227 aa6.5□□□□□ -1.37
TRIM4-205ENST00000496896 MRPS23Q9Y3D9 190 aaKnown RBP6.5□□□□□ -1.37
TRIM4-205ENST00000496896 ARVCFO00192 962 aa6.49□□□□□ -1.37
TRIM4-205ENST00000496896 ADAMTS17Q8TE56 1095 aa6.49□□□□□ -1.37
TRIM4-205ENST00000496896 THAP3Q8WTV1 239 aaPredicted RBP6.49□□□□□ -1.37
TRIM4-205ENST00000496896 IPPKQ9H8X2 491 aa6.49□□□□□ -1.37
TRIM4-205ENST00000496896 DSEQ9UL01 958 aa6.49□□□□□ -1.37
TRIM4-205ENST00000496896 SLC27A2O14975 620 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 EFCAB14O75071 495 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 GJA9P57773 515 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 EFEMP1Q12805 493 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 TRIM61Q5EBN2 209 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 NT5DC1Q5TFE4 455 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 ZSWIM2Q8NEG5 633 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 CLEC4DQ8WXI8 215 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 CLIC6Q96NY7 704 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 DNAJC7Q99615 494 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 OSBPL2Q9H1P3 480 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 TRAF6Q9Y4K3 522 aa6.48□□□□□ -1.37
TRIM4-205ENST00000496896 C9orf118A6NHY6 69 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 GSTA4O15217 222 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 SUV39H1O43463 412 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 ZNF28P17035 718 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 TUSC3Q13454 348 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 NFE2L2Q16236 605 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 KCTD1Q719H9 257 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.47□□□□□ -1.37
TRIM4-205ENST00000496896 MTDHQ86UE4 582 aaKnown RBP6.47□□□□□ -1.37
TRIM4-205ENST00000496896 ZDHHC14Q8IZN3 488 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 GSTCDQ8NEC7 633 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 PCDH19Q8TAB3 1148 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 KCNJ15Q99712 375 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 SYT3Q9BQG1 590 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 LNPKQ9C0E8 428 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 USP40Q9NVE5 1235 aa6.47□□□□□ -1.37
TRIM4-205ENST00000496896 CNOT11Q9UKZ1 510 aaKnown RBP6.47□□□□□ -1.37
TRIM4-205ENST00000496896 NKRFO15226 690 aaKnown RBP eCLIP6.46□□□□□ -1.38
TRIM4-205ENST00000496896 KCNQ2O43526 872 aa6.46□□□□□ -1.38
TRIM4-205ENST00000496896 CHGBP05060 677 aa6.46□□□□□ -1.38
TRIM4-205ENST00000496896 COL6A2P12110 1019 aa6.46□□□□□ -1.38
TRIM4-205ENST00000496896 INSRRP14616 1297 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms