RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ACTN1P12814 892 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 SP4Q02446 784 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 PTK7Q13308 1070 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 NEDD9Q14511 834 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 KRT32Q14532 448 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 RTN1Q16799 776 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 XRRA1Q6P2D8 792 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 KCNB2Q92953 911 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 GPR20Q99678 358 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 DOCK5Q9H7D0 1870 aa17.34■□□□□ 0.37
NEK4-206ENST00000496822 FAM217BQ9NTX9 383 aaPredicted RBP17.34■□□□□ 0.37
NEK4-206ENST00000496822 RBM28Q9NW13 759 aaKnown RBP17.34■□□□□ 0.37
NEK4-206ENST00000496822 TET1Q8NFU7 2136 aa17.33■□□□□ 0.37
NEK4-206ENST00000496822 PRUNE2Q8WUY3 3088 aa17.33■□□□□ 0.37
NEK4-206ENST00000496822 CHD7Q9P2D1 2997 aa17.33■□□□□ 0.37
NEK4-206ENST00000496822 GOLGA8AA7E2F4 631 aa17.33■□□□□ 0.36
NEK4-206ENST00000496822 GOLGA8BA8MQT2 603 aa17.33■□□□□ 0.36
NEK4-206ENST00000496822 H3BRB1 525 aa17.33■□□□□ 0.36
NEK4-206ENST00000496822 ITGB5P18084 799 aa17.33■□□□□ 0.36
NEK4-206ENST00000496822 CDC27P30260 824 aa17.33■□□□□ 0.36
NEK4-206ENST00000496822 HOXC8P31273 242 aa17.33■□□□□ 0.36
NEK4-206ENST00000496822 ADGRE1Q14246 886 aa17.33■□□□□ 0.36
NEK4-206ENST00000496822 MBTPS1Q14703 1052 aa17.33■□□□□ 0.36
NEK4-206ENST00000496822 TUT1Q9H6E5 874 aaKnown RBP17.33■□□□□ 0.36
NEK4-206ENST00000496822 SLC28A3Q9HAS3 691 aa17.33■□□□□ 0.36
NEK4-206ENST00000496822 PCDHA11Q9Y5I1 949 aa17.33■□□□□ 0.36
NEK4-206ENST00000496822 ATP9AO75110 1047 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 ARHGEF15O94989 841 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 CXCL10P02778 98 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 SMIM10L2AP0DMW4 78 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 SMIM10L2BP0DMW5 78 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 KCNA2P16389 499 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 HSPA4P34932 840 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 ZNF618Q5T7W0 954 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 PPP2R2DQ66LE6 453 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 NLRX1Q86UT6 975 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 SERINC5Q86VE9 423 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 PGBD1Q96JS3 809 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 JAKMIP1Q96N16 626 aaKnown RBP17.32■□□□□ 0.36
NEK4-206ENST00000496822 SLC9A7Q96T83 725 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 SENP7Q9BQF6 1050 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 PCDHA6Q9UN73 950 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 PCDHA8Q9Y5H6 950 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 SNX14Q9Y5W7 946 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 UBIAD1Q9Y5Z9 338 aa17.32■□□□□ 0.36
NEK4-206ENST00000496822 C17orf102A2RUQ5 167 aa17.31■□□□□ 0.36
NEK4-206ENST00000496822 SPDYE3A6NKU9 549 aa17.31■□□□□ 0.36
NEK4-206ENST00000496822 STXBP3O00186 592 aa17.31■□□□□ 0.36
NEK4-206ENST00000496822 BAIAP3O94812 1187 aa17.31■□□□□ 0.36
NEK4-206ENST00000496822 CA3P07451 260 aa17.31■□□□□ 0.36
NEK4-206ENST00000496822 NAPAP54920 295 aa17.31■□□□□ 0.36
NEK4-206ENST00000496822 APOBRQ0VD83 1088 aa17.31■□□□□ 0.36
NEK4-206ENST00000496822 UTP14CQ5TAP6 766 aaKnown RBP17.31■□□□□ 0.36
NEK4-206ENST00000496822 TMCO2Q7Z6W1 182 aaPredicted RBP17.31■□□□□ 0.36
NEK4-206ENST00000496822 HERC6Q8IVU3 1022 aa17.31■□□□□ 0.36
NEK4-206ENST00000496822 GPRASP2Q96D09 838 aa17.31■□□□□ 0.36
NEK4-206ENST00000496822 GAS2L1Q99501 681 aaPredicted RBP17.31■□□□□ 0.36
NEK4-206ENST00000496822 PKD2L1Q9P0L9 805 aa17.31■□□□□ 0.36
NEK4-206ENST00000496822 NAP1L2Q9ULW6 460 aaPredicted RBP17.31■□□□□ 0.36
NEK4-206ENST00000496822 V9GY48 417 aaPredicted RBP17.31■□□□□ 0.36
NEK4-206ENST00000496822 TRIP12Q14669 1992 aaPredicted RBP17.31■□□□□ 0.36
NEK4-206ENST00000496822 PTPRSQ13332 1948 aa17.3■□□□□ 0.36
NEK4-206ENST00000496822 TREHO43280 583 aa17.3■□□□□ 0.36
NEK4-206ENST00000496822 HMGB1P09429 215 aaKnown RBP17.3■□□□□ 0.36
NEK4-206ENST00000496822 WDR5P61964 334 aaKnown RBP17.3■□□□□ 0.36
NEK4-206ENST00000496822 DEFB103AP81534 67 aa17.3■□□□□ 0.36
NEK4-206ENST00000496822 ATP6V0A1Q93050 837 aa17.3■□□□□ 0.36
NEK4-206ENST00000496822 USP26Q9BXU7 913 aa17.3■□□□□ 0.36
NEK4-206ENST00000496822 RNPEPQ9H4A4 650 aa17.3■□□□□ 0.36
NEK4-206ENST00000496822 ADD1P35611 737 aaKnown RBP17.29■□□□□ 0.36
NEK4-206ENST00000496822 THPOP40225 353 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 ADCY7P51828 1080 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 RCAN1P53805 252 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 MTMR1Q13613 665 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 PPP1R18Q6NYC8 613 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 CNKSR3Q6P9H4 555 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 Q6ZUG5 572 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 PHOSPHO2Q8TCD6 241 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 BRF1Q92994 677 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 RIC8AQ9NPQ8 531 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 PRDM6Q9NQX0 595 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 SETD4Q9NVD3 440 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 TMEM260Q9NX78 707 aa17.29■□□□□ 0.36
NEK4-206ENST00000496822 PARNO95453 639 aaKnown RBP17.28■□□□□ 0.36
NEK4-206ENST00000496822 TCF7P36402 384 aaPredicted RBP17.28■□□□□ 0.36
NEK4-206ENST00000496822 KCNJ6P48051 423 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 METAP2P50579 478 aaKnown RBP eCLIP17.28■□□□□ 0.36
NEK4-206ENST00000496822 FGD1P98174 961 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 BLOC1S2Q6QNY1 142 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 SPRED2Q7Z698 418 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 CYP2W1Q8TAV3 490 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 PPM1EQ8WY54 764 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 CDHR1Q96JP9 859 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 COL25A1Q9BXS0 654 aaPredicted RBP17.28■□□□□ 0.36
NEK4-206ENST00000496822 ANO3Q9BYT9 981 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 OSBPL7Q9BZF2 842 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 CERS4Q9HA82 394 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 JADE2Q9NQC1 790 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 PPP4R2Q9NY27 417 aa17.28■□□□□ 0.36
NEK4-206ENST00000496822 BARHL2Q9NY43 387 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms