RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 PTCH2Q9Y6C5 1203 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 PHLPP2Q6ZVD8 1323 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 CYP3A4P08684 503 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 STAT6P42226 847 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 ZNF746Q6NUN9 644 aaPredicted RBP9.67□□□□□ -0.86
U2AF1-212ENST00000496462 METTL7BQ6UX53 244 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 FBXO16Q8IX29 292 aaPredicted RBP9.67□□□□□ -0.86
U2AF1-212ENST00000496462 HACE1Q8IYU2 909 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 NACC1Q96RE7 527 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 ZSWIM4Q9H7M6 989 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 TMEM260Q9NX78 707 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 DDX20Q9UHI6 824 aaKnown RBP9.67□□□□□ -0.86
U2AF1-212ENST00000496462 SMTNP53814 917 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 TFDP1Q14186 410 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 TLK2Q86UE8 772 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 ZNF710Q8N1W2 664 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 IQUBQ8NA54 791 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 SLC7A3Q8WY07 619 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 STARD7Q9NQZ5 370 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 ZNF302Q9NR11 478 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 ZNF646O15015 1829 aaPredicted RBP9.67□□□□□ -0.86
U2AF1-212ENST00000496462 MROH7Q68CQ1 1323 aa9.67□□□□□ -0.86
U2AF1-212ENST00000496462 VWA3AA6NCI4 1184 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 ELNP15502 786 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 SH3TC2Q8TF17 1288 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 AIFM3Q96NN9 605 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 FAM217BQ9NTX9 383 aaPredicted RBP9.66□□□□□ -0.86
U2AF1-212ENST00000496462 ERAP1Q9NZ08 941 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 RIPK3Q9Y572 518 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 PPFIA4O75335 1185 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 TPM2P07951 284 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 NR5A1Q13285 461 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 PPP2R5AQ15172 486 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 EPHA7Q15375 998 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 TPD52L1Q16890 204 aaPredicted RBP9.66□□□□□ -0.86
U2AF1-212ENST00000496462 TPH2Q8IWU9 490 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 TCP11Q8WWU5 503 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 ANP32BQ92688 251 aaKnown RBP9.66□□□□□ -0.86
U2AF1-212ENST00000496462 KIF2CQ99661 725 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 TTC12Q9H892 705 aaPredicted RBP9.66□□□□□ -0.86
U2AF1-212ENST00000496462 DISC1Q9NRI5 854 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 TFIP11Q9UBB9 837 aaKnown RBP9.66□□□□□ -0.86
U2AF1-212ENST00000496462 P4HBP07237 508 aaKnown RBP9.66□□□□□ -0.86
U2AF1-212ENST00000496462 ZNF792Q3KQV3 632 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 DUSP28Q4G0W2 176 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 TRMT1LQ7Z2T5 733 aaKnown RBP9.66□□□□□ -0.86
U2AF1-212ENST00000496462 SLC17A8Q8NDX2 589 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 CLEC4DQ8WXI8 215 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 DEFB118Q96PH6 123 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 INO80BQ9C086 356 aaPredicted RBP9.66□□□□□ -0.86
U2AF1-212ENST00000496462 PPME1Q9Y570 386 aa9.66□□□□□ -0.86
U2AF1-212ENST00000496462 MAGEB2O15479 319 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 PEX10O60683 326 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 STAT5BP51692 787 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 PSMC5P62195 406 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 PTGDRQ13258 359 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 PKN1Q16512 942 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 FSCN1Q16658 493 aaKnown RBP9.65□□□□□ -0.86
U2AF1-212ENST00000496462 XKR9Q5GH70 373 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 MORN1Q5T089 497 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 REPS2Q8NFH8 660 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 DACH1Q9UI36 760 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 ELP1O95163 1332 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 FAM13AO94988 1023 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 PRPHP41219 470 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 MLLT1Q03111 559 aaPredicted RBP9.65□□□□□ -0.86
U2AF1-212ENST00000496462 TBC1D8BQ0IIM8 1120 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 DOCK1Q14185 1865 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 CCDC144BQ3MJ40 725 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 SV2BQ7L1I2 683 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.65□□□□□ -0.86
U2AF1-212ENST00000496462 CYFIP1Q7L576 1253 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 RASGRP2Q7LDG7 609 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 CABP7Q86V35 215 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 KCNH7Q9NS40 1196 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 MTMR6Q9Y217 621 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 MOXD2PA6NHM9 499 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 CCL5P13501 91 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 MATR3P43243 847 aaKnown RBP eCLIP9.65□□□□□ -0.86
U2AF1-212ENST00000496462 BFSP2Q13515 415 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 Q4G0T1 1027 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 ZBTB8OSQ8IWT0 167 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 ANKRD20A12PQ8NF67 263 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 MAGEF1Q9HAY2 307 aa9.65□□□□□ -0.86
U2AF1-212ENST00000496462 HBP1O60381 514 aa9.65□□□□□ -0.87
U2AF1-212ENST00000496462 CNMDO75829 334 aa9.65□□□□□ -0.87
U2AF1-212ENST00000496462 FARP2O94887 1054 aaPredicted RBP9.65□□□□□ -0.87
U2AF1-212ENST00000496462 QARSP47897 775 aaKnown RBP9.65□□□□□ -0.87
U2AF1-212ENST00000496462 POLGP54098 1239 aaPredicted RBP9.65□□□□□ -0.87
U2AF1-212ENST00000496462 MAMDC4Q6UXC1 1216 aa9.65□□□□□ -0.87
U2AF1-212ENST00000496462 CUEDC2Q9H467 287 aa9.65□□□□□ -0.87
U2AF1-212ENST00000496462 ECM29Q5VYK3 1845 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 ZNF536O15090 1300 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 U2AF2P26368 475 aaKnown RBP eCLIP9.64□□□□□ -0.87
U2AF1-212ENST00000496462 CIITAP33076 1130 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 TECP42680 631 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 FUT2Q10981 343 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 RMND1Q9NWS8 449 aa9.64□□□□□ -0.87
U2AF1-212ENST00000496462 SEPT9Q9UHD8 586 aaPredicted RBP9.64□□□□□ -0.87
U2AF1-212ENST00000496462 DDX49Q9Y6V7 483 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms