RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 ATP2A1O14983 1001 aa15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 BCRP11274 1271 aa15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 IDEP14735 1019 aa15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 CCZ1BP86790 482 aa15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 CCZ1P86791 482 aaPredicted RBP15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 TPD52L1Q16890 204 aaPredicted RBP15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 NSMFQ6X4W1 530 aa15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 CLMNQ96JQ2 1002 aa15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 DUSP9Q99956 384 aaKnown RBP15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 GTPBP4Q9BZE4 634 aaKnown RBP15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 WDR11Q9BZH6 1224 aa15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 KCNH7Q9NS40 1196 aa15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 UBIAD1Q9Y5Z9 338 aa15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 STK24Q9Y6E0 443 aa15.27■□□□□ 0.03
SPTBN1-205ENST00000496323 IPO5O00410 1097 aaKnown RBP15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 TEX33O43247 280 aa15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 GAS7O60861 476 aa15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 EIF2AK2P19525 551 aaKnown RBP15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 BAATQ14032 418 aaPredicted RBP15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 KRT31Q15323 416 aa15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 GPBP1Q86WP2 473 aa15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 GLIS3Q8NEA6 775 aa15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 P2RX5Q93086 422 aa15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 UNC45AQ9H3U1 944 aa15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 ELP3Q9H9T3 547 aa15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 LIMA1Q9UHB6 759 aaKnown RBP15.26■□□□□ 0.03
SPTBN1-205ENST00000496323 CHMP2AO43633 222 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 SLITRK3O94933 977 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 CCNE1P24864 410 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 IREB2P48200 963 aaKnown RBP15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 COASYQ13057 564 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 TBX2Q13207 712 aaPredicted RBP15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 PABPC4Q13310 644 aaKnown RBP eCLIP15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 NOLC1Q14978 699 aaKnown RBP eCLIP15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 PGM5Q15124 567 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 TKFCQ3LXA3 575 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 TCP11X2Q5H9J9 407 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 ANKRD40Q6AI12 368 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 NIPA1Q7RTP0 329 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 SEMA6BQ9H3T3 888 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 TAF1DQ9H5J8 278 aaPredicted RBP15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 PXMP2Q9NR77 195 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 SPTLC3Q9NUV7 552 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 HOXC10Q9NYD6 342 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 DNM3Q9UQ16 869 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 RLFQ13129 1914 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 IRF6O14896 467 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 CTTNQ14247 550 aaKnown RBP15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 SYT2Q8N9I0 419 aaPredicted RBP15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 RMDN3Q96TC7 470 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 RIT2Q99578 217 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 PDCD2LQ9BRP1 358 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 TEX13BQ9BXU2 312 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 JADE2Q9NQC1 790 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 BMP2KQ9NSY1 1161 aaPredicted RBP15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 PANK4Q9NVE7 773 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 PCDHA2Q9Y5H9 948 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 MYPNQ86TC9 1320 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 PAPPA2Q9BXP8 1791 aa15.25■□□□□ 0.03
SPTBN1-205ENST00000496323 KCNJ18B7U540 433 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 DHX15O43143 795 aaKnown RBP15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 SKILP12757 684 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 PSMD2Q13200 908 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 KCNJ12Q14500 433 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 DYDC2Q96IM9 177 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 CTAGE1Q96RT6 745 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 SRRTQ9BXP5 876 aaKnown RBP15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 AGO4Q9HCK5 861 aaKnown RBP15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 ZC3H4Q9UPT8 1303 aaKnown RBP15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 POLR2AP24928 1970 aaKnown RBP15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 FRMD3A2A2Y4 597 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 PEX10O60683 326 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 PBX1P40424 430 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 PPP1R2P41236 205 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 PPATQ06203 517 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 RAD51AP2Q09MP3 1159 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 ITGB3BPQ13352 177 aaPredicted RBP15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 SPECC1LQ69YQ0 1117 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 CENPPQ6IPU0 288 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 GUF1Q8N442 669 aaKnown RBP15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 CCDC150Q8NCX0 1101 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 OTUD5Q96G74 571 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 TRIM47Q96LD4 638 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 TEKT3Q9BXF9 490 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 FGFBP2Q9BYJ0 223 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 THAP9Q9H5L6 903 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 TUFT1Q9NNX1 390 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 PKD2L1Q9P0L9 805 aa15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 WRAP73Q9P2S5 460 aaPredicted RBP15.24■□□□□ 0.03
SPTBN1-205ENST00000496323 A0A0G2JLL6 359 aaPredicted RBP15.23■□□□□ 0.03
SPTBN1-205ENST00000496323 GIT2Q14161 759 aa15.23■□□□□ 0.03
SPTBN1-205ENST00000496323 LRRC41Q15345 812 aa15.23■□□□□ 0.03
SPTBN1-205ENST00000496323 EAPPQ56P03 285 aaPredicted RBP15.23■□□□□ 0.03
SPTBN1-205ENST00000496323 PRRT2Q7Z6L0 340 aaPredicted RBP15.23■□□□□ 0.03
SPTBN1-205ENST00000496323 TPH2Q8IWU9 490 aa15.23■□□□□ 0.03
SPTBN1-205ENST00000496323 ANKRD13AQ8IZ07 590 aa15.23■□□□□ 0.03
SPTBN1-205ENST00000496323 CSGALNACT2Q8N6G5 542 aa15.23■□□□□ 0.03
SPTBN1-205ENST00000496323 BHMT2Q9H2M3 363 aa15.23■□□□□ 0.03
SPTBN1-205ENST00000496323 PARP14Q460N5 1801 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms