RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 POLR3CQ9BUI4 534 aaPredicted RBP27.34■■□□□ 1.97
PPP1R3F-205ENST00000495799 MORF4L1Q9UBU8 362 aa27.34■■□□□ 1.97
PPP1R3F-205ENST00000495799 TLL2Q9Y6L7 1015 aa27.34■■□□□ 1.97
PPP1R3F-205ENST00000495799 PEX10O60683 326 aa27.33■■□□□ 1.97
PPP1R3F-205ENST00000495799 MUTP22033 750 aa27.33■■□□□ 1.97
PPP1R3F-205ENST00000495799 ALDH5A1P51649 535 aaPredicted RBP27.33■■□□□ 1.97
PPP1R3F-205ENST00000495799 Q3C1V9 767 aa27.33■■□□□ 1.97
PPP1R3F-205ENST00000495799 FAM43AQ8N2R8 423 aa27.33■■□□□ 1.97
PPP1R3F-205ENST00000495799 NEK9Q8TD19 979 aa27.33■■□□□ 1.97
PPP1R3F-205ENST00000495799 ZFP91Q96JP5 570 aaPredicted RBP27.33■■□□□ 1.97
PPP1R3F-205ENST00000495799 NUDT12Q9BQG2 462 aa27.33■■□□□ 1.97
PPP1R3F-205ENST00000495799 CBX8Q9HC52 389 aa27.33■■□□□ 1.97
PPP1R3F-205ENST00000495799 TUFT1Q9NNX1 390 aa27.33■■□□□ 1.97
PPP1R3F-205ENST00000495799 SLC10A3P09131 477 aa27.32■■□□□ 1.96
PPP1R3F-205ENST00000495799 FCER1AP12319 257 aa27.32■■□□□ 1.96
PPP1R3F-205ENST00000495799 INHBEP58166 350 aa27.32■■□□□ 1.96
PPP1R3F-205ENST00000495799 MORC3Q14149 939 aa27.32■■□□□ 1.96
PPP1R3F-205ENST00000495799 STXBP2Q15833 593 aa27.32■■□□□ 1.96
PPP1R3F-205ENST00000495799 DPCR1Q3MIW9 517 aa27.32■■□□□ 1.96
PPP1R3F-205ENST00000495799 C11orf57Q6ZUT1 292 aaPredicted RBP27.32■■□□□ 1.96
PPP1R3F-205ENST00000495799 MLKLQ8NB16 471 aa27.32■■□□□ 1.96
PPP1R3F-205ENST00000495799 STAMQ92783 540 aa27.32■■□□□ 1.96
PPP1R3F-205ENST00000495799 INPP4AQ96PE3 977 aaPredicted RBP27.32■■□□□ 1.96
PPP1R3F-205ENST00000495799 CUL4BQ13620 913 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 FAM133AQ8N9E0 248 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 CCDC102AQ96A19 550 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 MTRQ99707 1265 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 C7orf25Q9BPX7 421 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 EIF2AK1Q9BQI3 630 aaKnown RBP27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 GTPBP4Q9BZE4 634 aaKnown RBP27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 BLOC1S4Q9NUP1 217 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 LOC102724159A0A0B4J2E5 919 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 BECN2A8MW95 431 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 PWP2Q15269 919 aaKnown RBP27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 EPHA7Q15375 998 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 CT47A1Q5JQC4 288 aaPredicted RBP27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 WDR78Q5VTH9 848 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 BLZF1Q9H2G9 400 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 KIAA1024Q9UPX6 916 aa27.31■■□□□ 1.96
PPP1R3F-205ENST00000495799 POTEB3A0JP26 581 aa27.3■■□□□ 1.96
PPP1R3F-205ENST00000495799 GOLGA6L19H0YKK7 550 aa27.3■■□□□ 1.96
PPP1R3F-205ENST00000495799 MED24O75448 989 aa27.3■■□□□ 1.96
PPP1R3F-205ENST00000495799 EIF3JO75822 258 aaKnown RBP27.3■■□□□ 1.96
PPP1R3F-205ENST00000495799 RPN1P04843 607 aaKnown RBP27.3■■□□□ 1.96
PPP1R3F-205ENST00000495799 POTEBQ6S5H4 581 aa27.3■■□□□ 1.96
PPP1R3F-205ENST00000495799 B3GNT9Q6UX72 402 aa27.3■■□□□ 1.96
PPP1R3F-205ENST00000495799 ANKRD13CQ8N6S4 541 aa27.3■■□□□ 1.96
PPP1R3F-205ENST00000495799 HHIPL1Q96JK4 782 aa27.3■■□□□ 1.96
PPP1R3F-205ENST00000495799 UNC45AQ9H3U1 944 aa27.3■■□□□ 1.96
PPP1R3F-205ENST00000495799 CHMP2AO43633 222 aa27.29■■□□□ 1.96
PPP1R3F-205ENST00000495799 CNTN2Q02246 1040 aa27.29■■□□□ 1.96
PPP1R3F-205ENST00000495799 PDE4DQ08499 809 aa27.29■■□□□ 1.96
PPP1R3F-205ENST00000495799 KCNB1Q14721 858 aa27.29■■□□□ 1.96
PPP1R3F-205ENST00000495799 ISM2Q6H9L7 571 aa27.29■■□□□ 1.96
PPP1R3F-205ENST00000495799 CATSPER3Q86XQ3 398 aa27.29■■□□□ 1.96
PPP1R3F-205ENST00000495799 LRRC15Q8TF66 581 aa27.29■■□□□ 1.96
PPP1R3F-205ENST00000495799 PTPN18Q99952 460 aa27.29■■□□□ 1.96
PPP1R3F-205ENST00000495799 DNM3Q9UQ16 869 aa27.29■■□□□ 1.96
PPP1R3F-205ENST00000495799 SMTNL1A8MU46 457 aa27.28■■□□□ 1.96
PPP1R3F-205ENST00000495799 KRT76Q01546 638 aa27.28■■□□□ 1.96
PPP1R3F-205ENST00000495799 MCM6Q14566 821 aa27.28■■□□□ 1.96
PPP1R3F-205ENST00000495799 ECM1Q16610 540 aa27.28■■□□□ 1.96
PPP1R3F-205ENST00000495799 FAM110CQ1W6H9 321 aa27.28■■□□□ 1.96
PPP1R3F-205ENST00000495799 TRIM9Q9C026 710 aa27.28■■□□□ 1.96
PPP1R3F-205ENST00000495799 BMP2KQ9NSY1 1161 aaPredicted RBP27.28■■□□□ 1.96
PPP1R3F-205ENST00000495799 ABT1Q9ULW3 272 aaKnown RBP27.28■■□□□ 1.96
PPP1R3F-205ENST00000495799 A0A087WWV3 80 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 TMEM88BA6NKF7 163 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 EML1O00423 815 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 TOMM70O94826 608 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 EDNRBP24530 442 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 CASP1P29466 404 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 TPM4P67936 248 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 SREBF2Q12772 1141 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 CNNM4Q6P4Q7 775 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 MIER3Q7Z3K6 550 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 LUZP1Q86V48 1076 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 ABRAQ8N0Z2 381 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 RDM1Q8NG50 284 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 PKD2L1Q9P0L9 805 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 NFASCO94856 1347 aa27.27■■□□□ 1.96
PPP1R3F-205ENST00000495799 DNAJC25-GNG10A0A024R161 153 aa27.26■■□□□ 1.96
PPP1R3F-205ENST00000495799 SOWAHBA6NEL2 793 aa27.26■■□□□ 1.96
PPP1R3F-205ENST00000495799 DHX15O43143 795 aaKnown RBP27.26■■□□□ 1.96
PPP1R3F-205ENST00000495799 STRNO43815 780 aa27.26■■□□□ 1.96
PPP1R3F-205ENST00000495799 SPATA31C1P0DKV0 1188 aa27.26■■□□□ 1.96
PPP1R3F-205ENST00000495799 SFNP31947 248 aa27.26■■□□□ 1.96
PPP1R3F-205ENST00000495799 JAK3P52333 1124 aa27.26■■□□□ 1.96
PPP1R3F-205ENST00000495799 ASIC1P78348 528 aa27.26■■□□□ 1.96
PPP1R3F-205ENST00000495799 ITGB3BPQ13352 177 aaPredicted RBP27.26■■□□□ 1.96
PPP1R3F-205ENST00000495799 IQCB1Q15051 598 aa27.26■■□□□ 1.96
PPP1R3F-205ENST00000495799 IVNS1ABPQ9Y6Y0 642 aa27.26■■□□□ 1.96
PPP1R3F-205ENST00000495799 DDX39AO00148 427 aaKnown RBP27.26■■□□□ 1.95
PPP1R3F-205ENST00000495799 PLA2G4BP0C869 781 aa27.26■■□□□ 1.95
PPP1R3F-205ENST00000495799 ICAM3P32942 547 aa27.26■■□□□ 1.95
PPP1R3F-205ENST00000495799 DHX8Q14562 1220 aaKnown RBP27.26■■□□□ 1.95
PPP1R3F-205ENST00000495799 HSD17B14Q9BPX1 270 aa27.26■■□□□ 1.95
PPP1R3F-205ENST00000495799 PORCNQ9H237 461 aa27.26■■□□□ 1.95
PPP1R3F-205ENST00000495799 EFCC1Q9HA90 598 aa27.26■■□□□ 1.95
PPP1R3F-205ENST00000495799 PLXNB2O15031 1838 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms