RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 XRRA1Q6P2D8 792 aa21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 CYFIP1Q7L576 1253 aa21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 SERINC5Q86VE9 423 aa21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 CMTR1Q8N1G2 835 aaKnown RBP21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 ATP6V0A1Q93050 837 aa21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 USP26Q9BXU7 913 aa21.21■□□□□ 0.99
CLCNKA-207ENST00000495784 RFXAPO00287 272 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 MEIS2O14770 477 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 EFCAB14O75071 495 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 SMIM10L2AP0DMW4 78 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 SMIM10L2BP0DMW5 78 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 SEMA3FQ13275 785 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 IKBKEQ14164 716 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 HIC1Q14526 733 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 NECTIN1Q15223 517 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 TRAF7Q6Q0C0 670 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 NLRX1Q86UT6 975 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 RAB11FIP4Q86YS3 637 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 ASB2Q96Q27 587 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 LRRC2Q9BYS8 371 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 PSTPIP2Q9H939 334 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 EMSYQ7Z589 1322 aa21.2■□□□□ 0.98
CLCNKA-207ENST00000495784 ARHGEF15O94989 841 aa21.19■□□□□ 0.98
CLCNKA-207ENST00000495784 DEFB103AP81534 67 aa21.19■□□□□ 0.98
CLCNKA-207ENST00000495784 MRPS5P82675 430 aaKnown RBP21.19■□□□□ 0.98
CLCNKA-207ENST00000495784 COL9A3Q14050 684 aaPredicted RBP21.19■□□□□ 0.98
CLCNKA-207ENST00000495784 RNF20Q5VTR2 975 aa21.19■□□□□ 0.98
CLCNKA-207ENST00000495784 TMCO2Q7Z6W1 182 aaPredicted RBP21.19■□□□□ 0.98
CLCNKA-207ENST00000495784 IL27Q8NEV9 243 aa21.19■□□□□ 0.98
CLCNKA-207ENST00000495784 GPR20Q99678 358 aa21.19■□□□□ 0.98
CLCNKA-207ENST00000495784 ZNF215Q9UL58 517 aaPredicted RBP21.19■□□□□ 0.98
CLCNKA-207ENST00000495784 TTC28Q96AY4 2481 aa21.19■□□□□ 0.98
CLCNKA-207ENST00000495784 RSPH10B2B2RC85 870 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 LGR5O75473 907 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 RSPH10BP0C881 870 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 GNAT1P11488 350 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 SP4Q02446 784 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 MBTPS1Q14703 1052 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 SKIV2LQ15477 1246 aaKnown RBP21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 BMP2KLQ5H9B9 411 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 SYNE3Q6ZMZ3 975 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 MICU3Q86XE3 530 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 CCDC82Q8N4S0 544 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 SENP7Q9BQF6 1050 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 MTCH2Q9Y6C9 303 aa21.18■□□□□ 0.98
CLCNKA-207ENST00000495784 hCG_1642624A0A1W2PR95 340 aa21.17■□□□□ 0.98
CLCNKA-207ENST00000495784 EPOPA6NHQ4 379 aa21.17■□□□□ 0.98
CLCNKA-207ENST00000495784 POU3F3P20264 500 aaPredicted RBP21.17■□□□□ 0.98
CLCNKA-207ENST00000495784 TCTN1Q2MV58 587 aa21.17■□□□□ 0.98
CLCNKA-207ENST00000495784 UTP14CQ5TAP6 766 aaKnown RBP21.17■□□□□ 0.98
CLCNKA-207ENST00000495784 TMTC3Q6ZXV5 915 aa21.17■□□□□ 0.98
CLCNKA-207ENST00000495784 TRIM50Q86XT4 487 aa21.17■□□□□ 0.98
CLCNKA-207ENST00000495784 FANCBQ8NB91 859 aa21.17■□□□□ 0.98
CLCNKA-207ENST00000495784 GIMAP8Q8ND71 665 aaPredicted RBP21.17■□□□□ 0.98
CLCNKA-207ENST00000495784 RNPEPQ9H4A4 650 aa21.17■□□□□ 0.98
CLCNKA-207ENST00000495784 LCHNA4D1U4 455 aa21.16■□□□□ 0.98
CLCNKA-207ENST00000495784 SPDYE3A6NKU9 549 aa21.16■□□□□ 0.98
CLCNKA-207ENST00000495784 TREHO43280 583 aa21.16■□□□□ 0.98
CLCNKA-207ENST00000495784 GJB5O95377 273 aa21.16■□□□□ 0.98
CLCNKA-207ENST00000495784 HOXC8P31273 242 aa21.16■□□□□ 0.98
CLCNKA-207ENST00000495784 CENPQQ7L2Z9 268 aaPredicted RBP21.16■□□□□ 0.98
CLCNKA-207ENST00000495784 HEATR3Q7Z4Q2 680 aa21.16■□□□□ 0.98
CLCNKA-207ENST00000495784 CDHR1Q96JP9 859 aa21.16■□□□□ 0.98
CLCNKA-207ENST00000495784 RAD9AQ99638 391 aa21.16■□□□□ 0.98
CLCNKA-207ENST00000495784 SPTBN5Q9NRC6 3674 aaKnown RBP21.16■□□□□ 0.98
CLCNKA-207ENST00000495784 CAND2O75155 1236 aa21.15■□□□□ 0.98
CLCNKA-207ENST00000495784 UBE2SQ16763 222 aa21.15■□□□□ 0.98
CLCNKA-207ENST00000495784 FAM117BQ6P1L5 589 aa21.15■□□□□ 0.98
CLCNKA-207ENST00000495784 SGMS1Q86VZ5 419 aa21.15■□□□□ 0.98
CLCNKA-207ENST00000495784 DBF4BQ8NFT6 615 aa21.15■□□□□ 0.98
CLCNKA-207ENST00000495784 GPRASP2Q96D09 838 aa21.15■□□□□ 0.98
CLCNKA-207ENST00000495784 SETD4Q9NVD3 440 aa21.15■□□□□ 0.98
CLCNKA-207ENST00000495784 TNFRSF10AO00220 468 aa21.14■□□□□ 0.97
CLCNKA-207ENST00000495784 AMHP03971 560 aa21.14■□□□□ 0.97
CLCNKA-207ENST00000495784 CTSHP09668 335 aa21.14■□□□□ 0.97
CLCNKA-207ENST00000495784 GRB10Q13322 594 aa21.14■□□□□ 0.97
CLCNKA-207ENST00000495784 SPRED2Q7Z698 418 aa21.14■□□□□ 0.97
CLCNKA-207ENST00000495784 SKAP1Q86WV1 359 aa21.14■□□□□ 0.97
CLCNKA-207ENST00000495784 ADAMTS19Q8TE59 1207 aa21.14■□□□□ 0.97
CLCNKA-207ENST00000495784 NEK1Q96PY6 1258 aa21.14■□□□□ 0.97
CLCNKA-207ENST00000495784 TELO2Q9Y4R8 837 aa21.14■□□□□ 0.97
CLCNKA-207ENST00000495784 ITGB5P18084 799 aa21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 TCF7P36402 384 aaPredicted RBP21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 ARHGAP4P98171 946 aa21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 MTMR1Q13613 665 aa21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 AAK1Q2M2I8 961 aa21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 PLEKHG4Q58EX7 1191 aa21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 KRT40Q6A162 431 aa21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 MYOCDQ8IZQ8 938 aa21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 SEPT8Q92599 483 aa21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 EHMT1Q9H9B1 1298 aa21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 RBM28Q9NW13 759 aaKnown RBP21.13■□□□□ 0.97
CLCNKA-207ENST00000495784 PTPRSQ13332 1948 aa21.12■□□□□ 0.97
CLCNKA-207ENST00000495784 RBAK-RBAKDNI3L0D1 243 aa21.12■□□□□ 0.97
CLCNKA-207ENST00000495784 ATP9AO75110 1047 aa21.12■□□□□ 0.97
CLCNKA-207ENST00000495784 KCNA2P16389 499 aa21.12■□□□□ 0.97
CLCNKA-207ENST00000495784 APOA5Q6Q788 366 aa21.12■□□□□ 0.97
CLCNKA-207ENST00000495784 LMBR1Q8WVP7 490 aa21.12■□□□□ 0.97
CLCNKA-207ENST00000495784 PKD2L1Q9P0L9 805 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms