RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 MTMR1Q13613 665 aa20.58■□□□□ 0.89
COL20A1-207ENST00000494913 RPUSD2Q8IZ73 545 aaKnown RBP20.58■□□□□ 0.89
COL20A1-207ENST00000494913 RETREG2Q8NC44 543 aa20.58■□□□□ 0.89
COL20A1-207ENST00000494913 GIMAP8Q8ND71 665 aaPredicted RBP20.58■□□□□ 0.89
COL20A1-207ENST00000494913 CTAGE1Q96RT6 745 aa20.58■□□□□ 0.89
COL20A1-207ENST00000494913 GPR20Q99678 358 aa20.58■□□□□ 0.89
COL20A1-207ENST00000494913 SLC26A6Q9BXS9 759 aa20.58■□□□□ 0.89
COL20A1-207ENST00000494913 ANO3Q9BYT9 981 aa20.58■□□□□ 0.89
COL20A1-207ENST00000494913 TELO2Q9Y4R8 837 aa20.58■□□□□ 0.89
COL20A1-207ENST00000494913 H3BRB1 525 aa20.57■□□□□ 0.88
COL20A1-207ENST00000494913 PITPNM1O00562 1244 aa20.57■□□□□ 0.88
COL20A1-207ENST00000494913 LGALS2P05162 132 aa20.57■□□□□ 0.88
COL20A1-207ENST00000494913 IFNAR1P17181 557 aa20.57■□□□□ 0.88
COL20A1-207ENST00000494913 FAM109BQ6ICB4 259 aaPredicted RBP20.57■□□□□ 0.88
COL20A1-207ENST00000494913 ZNF274Q96GC6 653 aaPredicted RBP20.57■□□□□ 0.88
COL20A1-207ENST00000494913 TUT1Q9H6E5 874 aaKnown RBP20.57■□□□□ 0.88
COL20A1-207ENST00000494913 JADE2Q9NQC1 790 aa20.57■□□□□ 0.88
COL20A1-207ENST00000494913 PKD2L1Q9P0L9 805 aa20.57■□□□□ 0.88
COL20A1-207ENST00000494913 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.56■□□□□ 0.88
COL20A1-207ENST00000494913 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.56■□□□□ 0.88
COL20A1-207ENST00000494913 KCNA2P16389 499 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 CLK2P49760 499 aaKnown RBP20.56■□□□□ 0.88
COL20A1-207ENST00000494913 AP3B2Q13367 1082 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 RASIP1Q5U651 963 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 JAKMIP3Q5VZ66 844 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 OTOP2Q7RTS6 562 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 DEFB128Q7Z7B8 93 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 CYP2W1Q8TAV3 490 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 CCDC12Q8WUD4 166 aaPredicted RBP20.56■□□□□ 0.88
COL20A1-207ENST00000494913 RNF26Q9BY78 433 aaPredicted RBP20.56■□□□□ 0.88
COL20A1-207ENST00000494913 C6orf50Q9HD87 102 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 DOCK5Q9H7D0 1870 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 MAFGO15525 162 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 IQCF3P0C7M6 154 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 ZNF200P98182 395 aaPredicted RBP20.56■□□□□ 0.88
COL20A1-207ENST00000494913 STK3Q13188 491 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 UTP14CQ5TAP6 766 aaKnown RBP20.56■□□□□ 0.88
COL20A1-207ENST00000494913 CCDC155Q8N6L0 562 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 HERVK_113Q902F9 699 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 VWCEQ96DN2 955 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 FAM161BQ96MY7 647 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 MXRA8Q9BRK3 442 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 ZMYND12Q9H0C1 365 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 MTMR10Q9NXD2 777 aa20.56■□□□□ 0.88
COL20A1-207ENST00000494913 ESYT2A0FGR8 921 aa20.55■□□□□ 0.88
COL20A1-207ENST00000494913 EIF5BO60841 1220 aaKnown RBP20.55■□□□□ 0.88
COL20A1-207ENST00000494913 ZNF697Q5TEC3 545 aa20.55■□□□□ 0.88
COL20A1-207ENST00000494913 CAGE1Q8TC20 777 aa20.55■□□□□ 0.88
COL20A1-207ENST00000494913 MTIF3Q9H2K0 278 aaKnown RBP20.55■□□□□ 0.88
COL20A1-207ENST00000494913 KCNH7Q9NS40 1196 aa20.55■□□□□ 0.88
COL20A1-207ENST00000494913 CXXC1Q9P0U4 656 aaPredicted RBP20.55■□□□□ 0.88
COL20A1-207ENST00000494913 CPLX1O14810 134 aa20.54■□□□□ 0.88
COL20A1-207ENST00000494913 ADAMTS3O15072 1205 aa20.54■□□□□ 0.88
COL20A1-207ENST00000494913 GNA11P29992 359 aa20.54■□□□□ 0.88
COL20A1-207ENST00000494913 ZNF76P36508 570 aa20.54■□□□□ 0.88
COL20A1-207ENST00000494913 SREBF1P36956 1147 aa20.54■□□□□ 0.88
COL20A1-207ENST00000494913 ANAPC15P60006 121 aa20.54■□□□□ 0.88
COL20A1-207ENST00000494913 HIC1Q14526 733 aa20.54■□□□□ 0.88
COL20A1-207ENST00000494913 CEP55Q53EZ4 464 aa20.54■□□□□ 0.88
COL20A1-207ENST00000494913 TRIM50Q86XT4 487 aa20.54■□□□□ 0.88
COL20A1-207ENST00000494913 DHX38Q92620 1227 aaKnown RBP20.54■□□□□ 0.88
COL20A1-207ENST00000494913 TRIP12Q14669 1992 aaPredicted RBP20.53■□□□□ 0.88
COL20A1-207ENST00000494913 GRXCR1A8MXD5 290 aa20.53■□□□□ 0.88
COL20A1-207ENST00000494913 SMIM10L2AP0DMW4 78 aa20.53■□□□□ 0.88
COL20A1-207ENST00000494913 SMIM10L2BP0DMW5 78 aa20.53■□□□□ 0.88
COL20A1-207ENST00000494913 RFC2P35250 354 aa20.53■□□□□ 0.88
COL20A1-207ENST00000494913 ARHGAP4P98171 946 aa20.53■□□□□ 0.88
COL20A1-207ENST00000494913 SSRP1Q08945 709 aaKnown RBP20.53■□□□□ 0.88
COL20A1-207ENST00000494913 PTK7Q13308 1070 aa20.53■□□□□ 0.88
COL20A1-207ENST00000494913 TRIM22Q8IYM9 498 aa20.53■□□□□ 0.88
COL20A1-207ENST00000494913 REXO1Q8N1G1 1221 aaKnown RBP20.53■□□□□ 0.88
COL20A1-207ENST00000494913 AFAP1L1Q8TED9 768 aa20.53■□□□□ 0.88
COL20A1-207ENST00000494913 SEPT1Q8WYJ6 367 aa20.53■□□□□ 0.88
COL20A1-207ENST00000494913 VPS54Q9P1Q0 977 aa20.53■□□□□ 0.88
COL20A1-207ENST00000494913 C17orf102A2RUQ5 167 aa20.52■□□□□ 0.88
COL20A1-207ENST00000494913 PFKMP08237 780 aa20.52■□□□□ 0.88
COL20A1-207ENST00000494913 ARP10275 920 aa20.52■□□□□ 0.88
COL20A1-207ENST00000494913 TCF7P36402 384 aaPredicted RBP20.52■□□□□ 0.88
COL20A1-207ENST00000494913 FTOQ9C0B1 505 aaKnown RBP eCLIP20.52■□□□□ 0.88
COL20A1-207ENST00000494913 RNPEPQ9H4A4 650 aa20.52■□□□□ 0.88
COL20A1-207ENST00000494913 ZNF215Q9UL58 517 aaPredicted RBP20.52■□□□□ 0.88
COL20A1-207ENST00000494913 COL6A3P12111 3177 aa20.52■□□□□ 0.88
COL20A1-207ENST00000494913 SCN5AQ14524 2016 aa20.51■□□□□ 0.87
COL20A1-207ENST00000494913 GSTTP1A0A1W2PQM5 241 aa20.51■□□□□ 0.87
COL20A1-207ENST00000494913 MEIS1O00470 390 aa20.51■□□□□ 0.87
COL20A1-207ENST00000494913 CKBP12277 381 aa20.51■□□□□ 0.87
COL20A1-207ENST00000494913 SELPP16109 830 aa20.51■□□□□ 0.87
COL20A1-207ENST00000494913 MCTP2Q6DN12 878 aa20.51■□□□□ 0.87
COL20A1-207ENST00000494913 CPLX2Q6PUV4 134 aaKnown RBP20.51■□□□□ 0.87
COL20A1-207ENST00000494913 CCDC148Q8NFR7 591 aa20.51■□□□□ 0.87
COL20A1-207ENST00000494913 BICD2Q8TD16 824 aa20.51■□□□□ 0.87
COL20A1-207ENST00000494913 ATP6V0A1Q93050 837 aa20.51■□□□□ 0.87
COL20A1-207ENST00000494913 SEMA6BQ9H3T3 888 aa20.51■□□□□ 0.87
COL20A1-207ENST00000494913 JPH1Q9HDC5 661 aaPredicted RBP20.51■□□□□ 0.87
COL20A1-207ENST00000494913 ZBBXA8MT70 800 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 SEC24BO95487 1268 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 DNAJB2P25686 324 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 RBL2Q08999 1139 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 LRRC8DQ7L1W4 858 aa20.5■□□□□ 0.87
COL20A1-207ENST00000494913 RASGRP4Q8TDF6 673 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms