RNA–Protein interactions for RNA: ENST00000494862.1

HDLBP-245, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 356 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-245ENST00000494862 ACAD9Q9H845 621 aa12.85□□□□□ -0.35
HDLBP-245ENST00000494862 JADE2Q9NQC1 790 aa12.85□□□□□ -0.35
HDLBP-245ENST00000494862 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-245ENST00000494862 IFNKQ9P0W0 207 aa12.85□□□□□ -0.35
HDLBP-245ENST00000494862 GDAQ9Y2T3 454 aa12.85□□□□□ -0.35
HDLBP-245ENST00000494862 RLFQ13129 1914 aa12.85□□□□□ -0.35
HDLBP-245ENST00000494862 SYNRGQ9UMZ2 1314 aa12.85□□□□□ -0.35
HDLBP-245ENST00000494862 PARP14Q460N5 1801 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 ESPNB1AK53 854 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 GAS7O60861 476 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 SPATA31C1P0DKV0 1188 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 ITGB5P18084 799 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 MUTP22033 750 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 PRCPP42785 496 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 PDE4DQ08499 809 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 PAK1Q13153 545 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 STIM1Q13586 685 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 PGM5Q15124 567 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 COBLL1Q53SF7 1204 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 CATSPER3Q86XQ3 398 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 CHST13Q8NET6 341 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 NELFBQ8WX92 580 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 RMDN3Q96TC7 470 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 EIF2AK1Q9BQI3 630 aaKnown RBP12.84□□□□□ -0.35
HDLBP-245ENST00000494862 PDCD2LQ9BRP1 358 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 XPO4Q9C0E2 1151 aaKnown RBP12.84□□□□□ -0.35
HDLBP-245ENST00000494862 TUFT1Q9NNX1 390 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 PXMP2Q9NR77 195 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 CTNND2Q9UQB3 1225 aa12.84□□□□□ -0.35
HDLBP-245ENST00000494862 OTOFQ9HC10 1997 aa12.83□□□□□ -0.35
HDLBP-245ENST00000494862 E9PMD0 336 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 IPO5O00410 1097 aaKnown RBP12.83□□□□□ -0.36
HDLBP-245ENST00000494862 EML1O00423 815 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 SERPINC1P01008 464 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 ATP1A3P13637 1013 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 EIF2AK2P19525 551 aaKnown RBP12.83□□□□□ -0.36
HDLBP-245ENST00000494862 CDK11BP21127 795 aaKnown RBP12.83□□□□□ -0.36
HDLBP-245ENST00000494862 CCND2P30279 289 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 STX17P56962 302 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 UBASH3AP57075 661 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 IRX3P78415 501 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-245ENST00000494862 MRPS9P82933 396 aaKnown RBP12.83□□□□□ -0.36
HDLBP-245ENST00000494862 PSMD2Q13200 908 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 PABPC4Q13310 644 aaKnown RBP eCLIP12.83□□□□□ -0.361e-7■■■■□ 24.2
HDLBP-245ENST00000494862 PLS1Q14651 629 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 EPHA7Q15375 998 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 ARHGEF16Q5VV41 709 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 B3GNT9Q6UX72 402 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 FASTKD5Q7L8L6 764 aaKnown RBP12.83□□□□□ -0.36
HDLBP-245ENST00000494862 RIOX2Q8IUF8 465 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 FAM43AQ8N2R8 423 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 DDX12PQ92771 950 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 OPTNQ96CV9 577 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 DHTKD1Q96HY7 919 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-245ENST00000494862 AGO4Q9HCK5 861 aaKnown RBP12.83□□□□□ -0.36
HDLBP-245ENST00000494862 AGTPBP1Q9UPW5 1226 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 DNM3Q9UQ16 869 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 ZKSCAN5Q9Y2L8 839 aa12.83□□□□□ -0.36
HDLBP-245ENST00000494862 POTEFA5A3E0 1075 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 PSMA7O14818 248 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 SSBP05455 408 aaKnown RBP eCLIP12.82□□□□□ -0.36
HDLBP-245ENST00000494862 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 SLC12A3P55017 1021 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 TPD52L1Q16890 204 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-245ENST00000494862 CDKAL1Q5VV42 579 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 POTEGQ6S5H5 508 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 POTEEQ6S8J3 1075 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 GPBP1Q86WP2 473 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 SYT2Q8N9I0 419 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-245ENST00000494862 NEK9Q8TD19 979 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 DNAJC19Q96DA6 116 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 ZFP91Q96JP5 570 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-245ENST00000494862 HSD17B14Q9BPX1 270 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 UNC45AQ9H3U1 944 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 A1CFQ9NQ94 594 aaKnown RBP12.82□□□□□ -0.36
HDLBP-245ENST00000494862 KCNH7Q9NS40 1196 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 SAMSN1Q9NSI8 373 aaKnown RBP12.82□□□□□ -0.36
HDLBP-245ENST00000494862 CYP39A1Q9NYL5 469 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 FBXO40Q9UH90 709 aa12.82□□□□□ -0.36
HDLBP-245ENST00000494862 LOC285556D6RIA3 1793 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 SLITRK3O94933 977 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 EYA4O95677 639 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 NR3C2P08235 984 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 MYCLP12524 364 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-245ENST00000494862 CYP11B2P19099 503 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 OSBPP22059 807 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 CCNE1P24864 410 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 FKBP1BP68106 108 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 EHHADHQ08426 723 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 STK4Q13043 487 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 MTMR1Q13613 665 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 MOGSQ13724 837 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 MAP1SQ66K74 1059 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-245ENST00000494862 DYMQ7RTS9 669 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 CCDC186Q7Z3E2 898 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 NLRX1Q86UT6 975 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 VSIG10LQ86VR7 867 aa12.81□□□□□ -0.36
HDLBP-245ENST00000494862 CCDC65Q8IXS2 484 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms