RNA–Protein interactions for RNA: ENST00000494647.2

NDFIP2-204, Transcript of Nedd4 family interacting protein 2, humanhuman

TSL 5

Gene NDFIP2, Length 344 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-204ENST00000494647 USP40Q9NVE5 1235 aa5.51□□□□□ -1.53
NDFIP2-204ENST00000494647 RGS17Q9UGC6 210 aaPredicted RBP5.51□□□□□ -1.53
NDFIP2-204ENST00000494647 TIMM13Q9Y5L4 95 aaPredicted RBP5.51□□□□□ -1.53
NDFIP2-204ENST00000494647 AGLP35573 1532 aa5.51□□□□□ -1.53
NDFIP2-204ENST00000494647 SYCP2Q9BX26 1530 aa5.51□□□□□ -1.53
NDFIP2-204ENST00000494647 PREX2Q70Z35 1606 aa5.51□□□□□ -1.53
NDFIP2-204ENST00000494647 CDC42BPAQ5VT25 1732 aa5.51□□□□□ -1.53
NDFIP2-204ENST00000494647 TCOF1Q13428 1488 aaKnown RBP5.51□□□□□ -1.53
NDFIP2-204ENST00000494647 IQSEC2Q5JU85 1478 aa5.51□□□□□ -1.53
NDFIP2-204ENST00000494647 CEP170BQ9Y4F5 1589 aaPredicted RBP5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 SPAG9O60271 1321 aaKnown RBP5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 CPP00450 1065 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 FPR2P25090 351 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 GTF2A2P52657 109 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 MROH9Q5TGP6 573 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 EEPD1Q7L9B9 569 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 CCDC103Q8IW40 242 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 MICAL1Q8TDZ2 1067 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 SEC14L1Q92503 715 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 ZBTB8AQ96BR9 441 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 DDX11Q96FC9 970 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 TRMT2BQ96GJ1 504 aaKnown RBP5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 CCDC140Q96MF4 163 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 NOX5Q96PH1 765 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 TINF2Q9BSI4 451 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 NTMQ9P121 344 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 CDK11AQ9UQ88 783 aaPredicted RBP5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 R3HCC1Q9Y3T6 440 aaKnown RBP5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 NEURL4Q96JN8 1562 aa5.5□□□□□ -1.53
NDFIP2-204ENST00000494647 AGRPO00253 132 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 GJB6O95452 261 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 SCG5P05408 212 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 C8BP07358 591 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 CELA3BP08861 270 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 DNAJA1P31689 397 aaKnown RBP5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 SLC6A11P48066 632 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 DLX2Q07687 328 aaPredicted RBP5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 PRSS53Q2L4Q9 553 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 ACBD5Q5T8D3 534 aaPredicted RBP5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 NT5DC1Q5TFE4 455 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 CEP68Q76N32 757 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 ZC3H18Q86VM9 953 aaKnown RBP5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 MCF2L2Q86YR7 1114 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 RIOX2Q8IUF8 465 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 PPIL6Q8IXY8 311 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 CARFQ8N187 725 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 ZNF428Q96B54 188 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 TMEM169Q96HH4 297 aa5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 TMEFF2Q9UIK5 374 aaPredicted RBP5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 COA3Q9Y2R0 106 aaPredicted RBP5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.49□□□□□ -1.53
NDFIP2-204ENST00000494647 CLIP1P30622 1438 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 NPATQ14207 1427 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 FMN1Q68DA7 1419 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 CNTLNQ9NXG0 1405 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 DNMT1P26358 1616 aaKnown RBP5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 STRCP1A6NGW2 1772 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 SHANK2Q9UPX8 1470 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 SGSM2O43147 1006 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 SMARCA5O60264 1052 aaPredicted RBP5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 LTBRP36941 435 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 BCL6P41182 706 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 GFRA1P56159 465 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 GJA9P57773 515 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 SMAD4Q13485 552 aaKnown RBP5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 SF1Q15637 639 aaKnown RBP5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 TTLL7Q6ZT98 887 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 MILR1Q7Z6M3 343 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 NLRP10Q86W26 655 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 Q8N1Y9 231 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 EPN3Q9H201 632 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 PCDH18Q9HCL0 1135 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 PALD1Q9ULE6 856 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 X6R8D5 127 aa5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 GPATCH8Q9UKJ3 1502 aaKnown RBP5.48□□□□□ -1.53
NDFIP2-204ENST00000494647 MROH2AA6NES4 1674 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 ZNF142P52746 1687 aaPredicted RBP5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 A2MP01023 1474 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 TOM1O60784 492 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 SARSP49591 514 aaKnown RBP5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 SKOR2Q2VWA4 1001 aaPredicted RBP5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 SLC10A6Q3KNW5 377 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 CD300LDQ6UXZ3 194 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 MIB1Q86YT6 1006 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 TMEM145Q8NBT3 493 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 KREMEN2Q8NCW0 462 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 RCBTB1Q8NDN9 531 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 HNRNPLLQ8WVV9 542 aaKnown RBP5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 CHAMP1Q96JM3 812 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 GORASP1Q9BQQ3 440 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 YIPF4Q9BSR8 244 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 BDH2Q9BUT1 245 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 ATP7AQ04656 1500 aa5.47□□□□□ -1.53
NDFIP2-204ENST00000494647 VWDEQ8N2E2 1590 aa5.46□□□□□ -1.53
NDFIP2-204ENST00000494647 A2ML1A8K2U0 1454 aa5.46□□□□□ -1.53
NDFIP2-204ENST00000494647 PLA2R1Q13018 1463 aa5.46□□□□□ -1.53
NDFIP2-204ENST00000494647 RBM25P49756 843 aaKnown RBP5.46□□□□□ -1.54
NDFIP2-204ENST00000494647 RTP5Q14D33 572 aa5.46□□□□□ -1.54
NDFIP2-204ENST00000494647 TESK1Q15569 626 aa5.46□□□□□ -1.54
NDFIP2-204ENST00000494647 CHRNA2Q15822 529 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms