RNA–Protein interactions for RNA: ENST00000494557.1

RAF1-212, Transcript of Raf-1 proto-oncogene, serine/threonine kinase, humanhuman

TSL 1 (best)

Gene RAF1, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1-212ENST00000494557 SCFD1Q8WVM8 642 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 NHEJ1Q9H9Q4 299 aaPredicted RBP9.45□□□□□ -0.9
RAF1-212ENST00000494557 LUC7L2Q9Y383 392 aaKnown RBP9.45□□□□□ -0.9
RAF1-212ENST00000494557 RABGAP1Q9Y3P9 1069 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 PLXNA1Q9UIW2 1896 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 TLR2O60603 784 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 VIL1P09327 827 aaKnown RBP9.45□□□□□ -0.9
RAF1-212ENST00000494557 GNG11P61952 73 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 UBXN1Q04323 297 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 NNTQ13423 1086 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 TMEM266Q2M3C6 531 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 SLC35F6Q8N357 371 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 MREGQ8N565 214 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 CSGALNACT2Q8N6G5 542 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 ACRBPQ8NEB7 543 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 AENQ8WTP8 325 aaKnown RBP9.45□□□□□ -0.9
RAF1-212ENST00000494557 GPR101Q96P66 508 aaPredicted RBP9.45□□□□□ -0.9
RAF1-212ENST00000494557 PNKPQ96T60 521 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 MKNK1Q9BUB5 465 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 SIX2Q9NPC8 291 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 ARGLU1Q9NWB6 273 aaPredicted RBP9.45□□□□□ -0.9
RAF1-212ENST00000494557 LRWD1Q9UFC0 647 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 DDX25Q9UHL0 483 aaKnown RBP9.45□□□□□ -0.9
RAF1-212ENST00000494557 TTC7AQ9ULT0 858 aaPredicted RBP9.45□□□□□ -0.9
RAF1-212ENST00000494557 MGAMO43451 1857 aa9.45□□□□□ -0.9
RAF1-212ENST00000494557 PDXKO00764 312 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 SHOX2O60902 331 aaPredicted RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 PSMD10O75832 226 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 PRPF6O94906 941 aaKnown RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 HSPA1LP34931 641 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 NPEPPSP55786 919 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 PDE4DQ08499 809 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 FAM83AQ86UY5 434 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 IPO4Q8TEX9 1081 aaKnown RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 DDX12PQ92771 950 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 ARID3AQ99856 593 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 DESI2Q9BSY9 194 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 SAP30BPQ9UHR5 308 aaKnown RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 TMX2Q9Y320 296 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 GRID2IPA4D2P6 1211 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 EPB41P11171 864 aaKnown RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 SNRPFP62306 86 aaKnown RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 TRAF1Q13077 416 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 GIT2Q14161 759 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 QRICH1Q2TAL8 776 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 DPP8Q6V1X1 898 aaPredicted RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 AGPAT5Q9NUQ2 364 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 JRKLQ9Y4A0 524 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 DDTLA6NHG4 134 aaPredicted RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 EPHB6O15197 1021 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 GOLGA8HP0CJ92 632 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 CDC25AP30304 524 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 STX17P56962 302 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 FKBP3Q00688 224 aaKnown RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 NFIAQ12857 509 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 RRP1BQ14684 758 aaKnown RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 GLE1Q53GS7 698 aaKnown RBP9.44□□□□□ -0.9
RAF1-212ENST00000494557 TAF3Q5VWG9 929 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 SLC30A5Q8TAD4 765 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 UBXN4Q92575 508 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 CAVIN3Q969G5 261 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 ANO3Q9BYT9 981 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 SNX12Q9UMY4 172 aa9.44□□□□□ -0.9
RAF1-212ENST00000494557 ASTN1O14525 1302 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 NCANO14594 1321 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 B4DLN1 442 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 HLA-DOAP06340 250 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 TECP42680 631 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 PTGER2P43116 358 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 GTF2IP78347 998 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 ZFPM1Q8IX07 1006 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 CCDC47Q96A33 483 aaKnown RBP9.43□□□□□ -0.9
RAF1-212ENST00000494557 IRX2Q9BZI1 471 aaPredicted RBP9.43□□□□□ -0.9
RAF1-212ENST00000494557 USP40Q9NVE5 1235 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 SEL1LQ9UBV2 794 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 STX8Q9UNK0 236 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 STXBP5LQ9Y2K9 1186 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 COL4A3BPQ9Y5P4 624 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 MCM3P25205 808 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 CYLC1P35663 651 aaPredicted RBP9.43□□□□□ -0.9
RAF1-212ENST00000494557 JAG1P78504 1218 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 LETM2Q2VYF4 491 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 SPDYE2Q495Y8 402 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 TRIM58Q8NG06 486 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 SRRM3A6NNA2 597 aaPredicted RBP9.43□□□□□ -0.9
RAF1-212ENST00000494557 YDJCA8MPS7 323 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 USP17L10C9JJH3 530 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 CCT6AP40227 531 aaKnown RBP9.43□□□□□ -0.9
RAF1-212ENST00000494557 SOGA3Q5TF21 947 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 LRRC57Q8N9N7 239 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 SUPT20HQ8NEM7 779 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 NEK9Q8TD19 979 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 ZNF526Q8TF50 670 aaPredicted RBP9.43□□□□□ -0.9
RAF1-212ENST00000494557 EXOC4Q96A65 974 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 LACRTQ9GZZ8 138 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 VPS16Q9H269 839 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 PSTPIP2Q9H939 334 aa9.43□□□□□ -0.9
RAF1-212ENST00000494557 BIN2Q9UBW5 565 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms