RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 TEX2Q8IWB9 1127 aa38.02■■■■□ 3.68
CBX4-203ENST00000494546 CCDC155Q8N6L0 562 aa38.02■■■■□ 3.68
CBX4-203ENST00000494546 GIMAP8Q8ND71 665 aaPredicted RBP38.02■■■■□ 3.68
CBX4-203ENST00000494546 PHKBQ93100 1093 aa38.02■■■■□ 3.68
CBX4-203ENST00000494546 TM6SF1Q9BZW5 370 aa38.02■■■■□ 3.68
CBX4-203ENST00000494546 GLT8D2Q9H1C3 349 aa38.02■■■■□ 3.68
CBX4-203ENST00000494546 MTIF3Q9H2K0 278 aaKnown RBP38.02■■■■□ 3.68
CBX4-203ENST00000494546 TMEM260Q9NX78 707 aa38.02■■■■□ 3.68
CBX4-203ENST00000494546 PKD2L1Q9P0L9 805 aa38.02■■■■□ 3.68
CBX4-203ENST00000494546 LAMA2P24043 3122 aaKnown RBP38.02■■■■□ 3.68
CBX4-203ENST00000494546 PRPF3O43395 683 aaKnown RBP38.01■■■■□ 3.68
CBX4-203ENST00000494546 FOSP01100 380 aaPredicted RBP38.01■■■■□ 3.68
CBX4-203ENST00000494546 EVCP57679 992 aa38.01■■■■□ 3.68
CBX4-203ENST00000494546 AKAP17AQ02040 695 aaKnown RBP38.01■■■■□ 3.68
CBX4-203ENST00000494546 MTMR1Q13613 665 aa38.01■■■■□ 3.68
CBX4-203ENST00000494546 ANO3Q9BYT9 981 aa38.01■■■■□ 3.68
CBX4-203ENST00000494546 NCOA5Q9HCD5 579 aaKnown RBP38.01■■■■□ 3.68
CBX4-203ENST00000494546 CXXC1Q9P0U4 656 aaPredicted RBP38.01■■■■□ 3.68
CBX4-203ENST00000494546 TELO2Q9Y4R8 837 aa38.01■■■■□ 3.68
CBX4-203ENST00000494546 H3BRB1 525 aa38■■■■□ 3.67
CBX4-203ENST00000494546 ATP9AO75110 1047 aa38■■■■□ 3.67
CBX4-203ENST00000494546 IQCF3P0C7M6 154 aa38■■■■□ 3.67
CBX4-203ENST00000494546 CAGE1Q8TC20 777 aa38■■■■□ 3.67
CBX4-203ENST00000494546 TUT1Q9H6E5 874 aaKnown RBP38■■■■□ 3.67
CBX4-203ENST00000494546 JADE2Q9NQC1 790 aa38■■■■□ 3.67
CBX4-203ENST00000494546 KCNA2P16389 499 aa37.99■■■■□ 3.67
CBX4-203ENST00000494546 VWCEQ96DN2 955 aa37.99■■■■□ 3.67
CBX4-203ENST00000494546 LARP6Q9BRS8 491 aaKnown RBP37.99■■■■□ 3.67
CBX4-203ENST00000494546 DOCK5Q9H7D0 1870 aa37.98■■■■□ 3.67
CBX4-203ENST00000494546 PFKMP08237 780 aa37.98■■■■□ 3.67
CBX4-203ENST00000494546 RFC2P35250 354 aa37.98■■■■□ 3.67
CBX4-203ENST00000494546 ZNF200P98182 395 aaPredicted RBP37.98■■■■□ 3.67
CBX4-203ENST00000494546 NTRK3Q16288 839 aa37.98■■■■□ 3.67
CBX4-203ENST00000494546 PKN1Q16512 942 aa37.98■■■■□ 3.67
CBX4-203ENST00000494546 UTP14CQ5TAP6 766 aaKnown RBP37.98■■■■□ 3.67
CBX4-203ENST00000494546 DHX38Q92620 1227 aaKnown RBP37.98■■■■□ 3.67
CBX4-203ENST00000494546 SLC26A6Q9BXS9 759 aa37.98■■■■□ 3.67
CBX4-203ENST00000494546 GRXCR1A8MXD5 290 aa37.97■■■■□ 3.67
CBX4-203ENST00000494546 AP3B2Q13367 1082 aa37.97■■■■□ 3.67
CBX4-203ENST00000494546 AFAP1L1Q8TED9 768 aa37.97■■■■□ 3.67
CBX4-203ENST00000494546 MXRA8Q9BRK3 442 aa37.97■■■■□ 3.67
CBX4-203ENST00000494546 SEMA6BQ9H3T3 888 aa37.97■■■■□ 3.67
CBX4-203ENST00000494546 CLK2P49760 499 aaKnown RBP37.96■■■■□ 3.67
CBX4-203ENST00000494546 HIC1Q14526 733 aa37.96■■■■□ 3.67
CBX4-203ENST00000494546 JAKMIP3Q5VZ66 844 aa37.96■■■■□ 3.67
CBX4-203ENST00000494546 TRIM50Q86XT4 487 aa37.96■■■■□ 3.67
CBX4-203ENST00000494546 CCDC12Q8WUD4 166 aaPredicted RBP37.96■■■■□ 3.67
CBX4-203ENST00000494546 GUCD1Q96NT3 240 aa37.96■■■■□ 3.67
CBX4-203ENST00000494546 PDRG1Q9NUG6 133 aa37.96■■■■□ 3.67
CBX4-203ENST00000494546 ZBBXA8MT70 800 aa37.95■■■■□ 3.67
CBX4-203ENST00000494546 MAFGO15525 162 aa37.95■■■■□ 3.67
CBX4-203ENST00000494546 IFNAR1P17181 557 aa37.95■■■■□ 3.67
CBX4-203ENST00000494546 DNAJB2P25686 324 aa37.95■■■■□ 3.67
CBX4-203ENST00000494546 PTK7Q13308 1070 aa37.95■■■■□ 3.67
CBX4-203ENST00000494546 RNF26Q9BY78 433 aaPredicted RBP37.95■■■■□ 3.67
CBX4-203ENST00000494546 FTOQ9C0B1 505 aaKnown RBP eCLIP37.95■■■■□ 3.679e-12■■■■■ 34.3
CBX4-203ENST00000494546 TTYH1Q9H313 450 aaPredicted RBP37.95■■■■□ 3.67
CBX4-203ENST00000494546 C6orf50Q9HD87 102 aa37.95■■■■□ 3.67
CBX4-203ENST00000494546 SMIM10L2AP0DMW4 78 aa37.94■■■■□ 3.66
CBX4-203ENST00000494546 SMIM10L2BP0DMW5 78 aa37.94■■■■□ 3.66
CBX4-203ENST00000494546 CYP2W1Q8TAV3 490 aa37.94■■■■□ 3.66
CBX4-203ENST00000494546 ZMYND12Q9H0C1 365 aa37.94■■■■□ 3.66
CBX4-203ENST00000494546 ZNF215Q9UL58 517 aaPredicted RBP37.94■■■■□ 3.66
CBX4-203ENST00000494546 ESYT2A0FGR8 921 aa37.93■■■■□ 3.66
CBX4-203ENST00000494546 C17orf102A2RUQ5 167 aa37.93■■■■□ 3.66
CBX4-203ENST00000494546 SELPP16109 830 aa37.93■■■■□ 3.66
CBX4-203ENST00000494546 SREBF1P36956 1147 aa37.93■■■■□ 3.66
CBX4-203ENST00000494546 LRRC8DQ7L1W4 858 aa37.93■■■■□ 3.66
CBX4-203ENST00000494546 KCNH7Q9NS40 1196 aa37.93■■■■□ 3.66
CBX4-203ENST00000494546 STXBP5LQ9Y2K9 1186 aa37.93■■■■□ 3.66
CBX4-203ENST00000494546 SLC4A7Q9Y6M7 1214 aa37.93■■■■□ 3.66
CBX4-203ENST00000494546 SCN5AQ14524 2016 aa37.93■■■■□ 3.66
CBX4-203ENST00000494546 CKBP12277 381 aa37.92■■■■□ 3.66
CBX4-203ENST00000494546 TCF7P36402 384 aaPredicted RBP37.92■■■■□ 3.66
CBX4-203ENST00000494546 PBX2P40425 430 aa37.92■■■■□ 3.66
CBX4-203ENST00000494546 ZNF274Q96GC6 653 aaPredicted RBP37.92■■■■□ 3.66
CBX4-203ENST00000494546 PBX4Q9BYU1 374 aa37.92■■■■□ 3.66
CBX4-203ENST00000494546 TANC1Q9C0D5 1861 aa37.92■■■■□ 3.66
CBX4-203ENST00000494546 ACTN1P12814 892 aa37.91■■■■□ 3.66
CBX4-203ENST00000494546 ZNF76P36508 570 aa37.91■■■■□ 3.66
CBX4-203ENST00000494546 RBL2Q08999 1139 aa37.91■■■■□ 3.66
CBX4-203ENST00000494546 STK3Q13188 491 aa37.91■■■■□ 3.66
CBX4-203ENST00000494546 CEP55Q53EZ4 464 aa37.91■■■■□ 3.66
CBX4-203ENST00000494546 SEPT1Q8WYJ6 367 aa37.91■■■■□ 3.66
CBX4-203ENST00000494546 ATP6V0A1Q93050 837 aa37.91■■■■□ 3.66
CBX4-203ENST00000494546 WNT8BQ93098 351 aa37.91■■■■□ 3.66
CBX4-203ENST00000494546 TIFAQ96CG3 184 aa37.91■■■■□ 3.66
CBX4-203ENST00000494546 TMEM265A0A087WTH1 108 aa37.9■■■■□ 3.66
CBX4-203ENST00000494546 ADAMTS3O15072 1205 aa37.9■■■■□ 3.66
CBX4-203ENST00000494546 ARHGAP4P98171 946 aa37.9■■■■□ 3.66
CBX4-203ENST00000494546 REXO1Q8N1G1 1221 aaKnown RBP37.9■■■■□ 3.66
CBX4-203ENST00000494546 RNPEPQ9H4A4 650 aa37.9■■■■□ 3.66
CBX4-203ENST00000494546 TRIP12Q14669 1992 aaPredicted RBP37.89■■■■□ 3.66
CBX4-203ENST00000494546 GSTTP1A0A1W2PQM5 241 aa37.89■■■■□ 3.66
CBX4-203ENST00000494546 CPLX1O14810 134 aa37.89■■■■□ 3.66
CBX4-203ENST00000494546 ARP10275 920 aa37.89■■■■□ 3.66
CBX4-203ENST00000494546 GNA11P29992 359 aa37.89■■■■□ 3.66
CBX4-203ENST00000494546 TRIM22Q8IYM9 498 aa37.89■■■■□ 3.66
CBX4-203ENST00000494546 JPH1Q9HDC5 661 aaPredicted RBP37.89■■■■□ 3.66
CBX4-203ENST00000494546 VPS54Q9P1Q0 977 aa37.89■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms