RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 SOX10P56693 466 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 LMOD3Q0VAK6 560 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 MAP7Q14244 749 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 SGO2Q562F6 1265 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 ANKRD36CQ5JPF3 1778 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 PRAMEF18Q5VWM3 479 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 DUSP27Q5VZP5 1158 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 FBXW10Q5XX13 1052 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 MOB2Q70IA6 237 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 ZDHHC13Q8IUH4 622 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 RBBP8NLQ8NC74 664 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-219ENST00000494323 OR6P1Q8NGX9 317 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 EZH1Q92800 747 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-219ENST00000494323 EYA3Q99504 573 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 CDHR2Q9BYE9 1310 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 OSBPL2Q9H1P3 480 aa6.63□□□□□ -1.35
PTCD3-219ENST00000494323 PHAXQ9H814 394 aaKnown RBP6.63□□□□□ -1.35
PTCD3-219ENST00000494323 DBF4Q9UBU7 674 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-219ENST00000494323 UFL1O94874 794 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 RPS12P25398 132 aaKnown RBP6.62□□□□□ -1.35
PTCD3-219ENST00000494323 CAP2P40123 477 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 DDX10Q13206 875 aaKnown RBP6.62□□□□□ -1.35
PTCD3-219ENST00000494323 RALBP1Q15311 655 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 ANGEL2Q5VTE6 544 aaKnown RBP6.62□□□□□ -1.35
PTCD3-219ENST00000494323 SLC6A19Q695T7 634 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 CDPF1Q6NVV7 123 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 CCDC81Q6ZN84 652 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 NOP9Q86U38 636 aaKnown RBP6.62□□□□□ -1.35
PTCD3-219ENST00000494323 MCATQ8IVS2 390 aaKnown RBP6.62□□□□□ -1.35
PTCD3-219ENST00000494323 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.62□□□□□ -1.35
PTCD3-219ENST00000494323 MRPL41Q8IXM3 137 aaKnown RBP6.62□□□□□ -1.35
PTCD3-219ENST00000494323 FBLIM1Q8WUP2 373 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 RUNDC1Q96C34 613 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 CDCA5Q96FF9 252 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 SHDQ96IW2 340 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 MYD88Q99836 296 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 HYPKQ9NX55 129 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 GGA3Q9NZ52 723 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 GMIPQ9P107 970 aa6.62□□□□□ -1.35
PTCD3-219ENST00000494323 COL4A1P02462 1669 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 SCN9AQ15858 1988 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 AKAP11Q9UKA4 1901 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 MEIS3P2A8K0S8 358 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 UBE2Q2LH0YL09 131 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 KLF4O43474 513 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 TBC1D8O95759 1140 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 GIPRP48546 466 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 YARSP54577 528 aaKnown RBP6.61□□□□□ -1.35
PTCD3-219ENST00000494323 ZBTB38Q8NAP3 1195 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-219ENST00000494323 SHKBP1Q8TBC3 707 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 TMEM40Q8WWA1 233 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 ACSF2Q96CM8 615 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-219ENST00000494323 TMEM87BQ96K49 555 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 MXD3Q9BW11 206 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 SEMA6CQ9H3T2 930 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 TJP2Q9UDY2 1190 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 DAGLAQ9Y4D2 1042 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 MRVI1Q9Y6F6 885 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 THSD7BQ9C0I4 1608 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 DUOX1Q9NRD9 1551 aa6.61□□□□□ -1.35
PTCD3-219ENST00000494323 FAM95CA0A1B0GW59 222 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 SLC22A31A6NKX4 558 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 NFICP08651 508 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 WDR43Q15061 677 aaKnown RBP eCLIP6.6□□□□□ -1.35
PTCD3-219ENST00000494323 NBPF9Q3BBW0 867 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 PAOXQ6QHF9 649 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 CKAP2LQ8IYA6 745 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 FAM169BQ8N8A8 192 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 AGBL3Q8NEM8 1001 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 GIMAP7Q8NHV1 300 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 ANAPC16Q96DE5 110 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 TM9SF2Q99805 663 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 ZSWIM4Q9H7M6 989 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 FBRSQ9HAH7 460 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 MYOZ2Q9NPC6 264 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 SAGE1Q9NXZ1 904 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 KLHL3Q9UH77 587 aa6.6□□□□□ -1.35
PTCD3-219ENST00000494323 DDX60Q8IY21 1712 aaKnown RBP6.59□□□□□ -1.35
PTCD3-219ENST00000494323 TNRC18O15417 2968 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-219ENST00000494323 KIAA1324LA8MWY0 1029 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-219ENST00000494323 WDR64B1ANS9 1081 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 PDE8AO60658 829 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 LRIG2O94898 1065 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 CST3P01034 146 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-219ENST00000494323 HOXB7P09629 217 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 ZNF280AP59817 542 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-219ENST00000494323 PRKG1Q13976 671 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 SLBPQ14493 270 aaKnown RBP eCLIP6.59□□□□□ -1.35
PTCD3-219ENST00000494323 NFKBIBQ15653 356 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 CCDC152Q4G0S7 254 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 TNNI3KQ59H18 835 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 CDCP2Q5VXM1 449 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 OVOS1Q6IE37 1185 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 CTU1Q7Z7A3 348 aaKnown RBP6.59□□□□□ -1.35
PTCD3-219ENST00000494323 LSRQ86X29 649 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-219ENST00000494323 ANKRD18AQ8IVF6 992 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 SLFN12Q8IYM2 578 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 TAB3Q8N5C8 712 aaPredicted RBP6.59□□□□□ -1.35
PTCD3-219ENST00000494323 C8orf58Q8NAV2 365 aa6.59□□□□□ -1.35
PTCD3-219ENST00000494323 FAM13CQ8NE31 585 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms