RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 FIGNQ5HY92 759 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 VASNQ6EMK4 673 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 BRAPQ7Z569 592 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 NLRP10Q86W26 655 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 MIB1Q86YT6 1006 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 GSTCDQ8NEC7 633 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 SLC7A14Q8TBB6 771 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 E2F7Q96AV8 911 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 CNTD2Q9H8S5 307 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 INTS7Q9NVH2 962 aaKnown RBP3.4□□□□□ -1.87
LMNB1-207ENST00000494185 DTLQ9NZJ0 730 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 DSEQ9UL01 958 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 PALD1Q9ULE6 856 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 CD2APQ9Y5K6 639 aa3.4□□□□□ -1.87
LMNB1-207ENST00000494185 MYOCOSA0A1B0GUC4 107 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 WNT9AO14904 365 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 FBXO21O94952 628 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 ASGR2P07307 311 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 PI3P19957 117 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 PMLP29590 882 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 IGFALSP35858 605 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 CDR1P51861 262 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 OCRLQ01968 901 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 TKFCQ3LXA3 575 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 BORAQ6PGQ7 559 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 CD300LDQ6UXZ3 194 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 OTOP3Q7RTS5 596 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.39□□□□□ -1.87
LMNB1-207ENST00000494185 PLEKHH3Q7Z736 793 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 KIAA0907Q7Z7F0 614 aaPredicted RBP3.39□□□□□ -1.87
LMNB1-207ENST00000494185 AHI1Q8N157 1196 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 UHMK1Q8TAS1 419 aaKnown RBP3.39□□□□□ -1.87
LMNB1-207ENST00000494185 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.39□□□□□ -1.87
LMNB1-207ENST00000494185 SCYL1Q96KG9 808 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 CELF4Q9BZC1 486 aaKnown RBP3.39□□□□□ -1.87
LMNB1-207ENST00000494185 TRIM39Q9HCM9 518 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 USP40Q9NVE5 1235 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 MAGEC2Q9UBF1 373 aaPredicted RBP3.39□□□□□ -1.87
LMNB1-207ENST00000494185 PPARGC1AQ9UBK2 798 aaKnown RBP3.39□□□□□ -1.87
LMNB1-207ENST00000494185 FBLN5Q9UBX5 448 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 PCDHA9Q9Y5H5 950 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 PCDHA8Q9Y5H6 950 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 PCDHA5Q9Y5H7 936 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 ATP23Q9Y6H3 246 aa3.39□□□□□ -1.87
LMNB1-207ENST00000494185 TCRBV16S1A1N1A0A5B0 115 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 ARVCFO00192 962 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 IRS4O14654 1257 aaPredicted RBP3.38□□□□□ -1.87
LMNB1-207ENST00000494185 OPA1O60313 960 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 RASGRP1O95267 797 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 ASLP04424 464 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 CHGBP05060 677 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 CPEP16870 476 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 NCLP19338 710 aaKnown RBP3.38□□□□□ -1.87
LMNB1-207ENST00000494185 GJA9P57773 515 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 FOXO4P98177 505 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 ZNF174Q15697 407 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 DPP8Q6V1X1 898 aaPredicted RBP3.38□□□□□ -1.87
LMNB1-207ENST00000494185 KCTD1Q719H9 257 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 C16orf59Q7L2K0 433 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 FGD2Q7Z6J4 655 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 NME9Q86XW9 330 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 PASD1Q8IV76 773 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 NIM1KQ8IY84 436 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 PPM1KQ8N3J5 372 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 PCDH19Q8TAB3 1148 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 PIP4K2CQ8TBX8 421 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 NINJ1Q92982 152 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 MFSD3Q96ES6 412 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 SCLYQ96I15 445 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 PWWP2AQ96N64 755 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 CLUHP3Q96NS8 147 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 KCNJ15Q99712 375 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 JAM3Q9BX67 310 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 CDIP1Q9H305 208 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 PCIF1Q9H4Z3 704 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 IPPKQ9H8X2 491 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 ARHGAP28Q9P2N2 729 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 ASH2LQ9UBL3 628 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 ZKSCAN5Q9Y2L8 839 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 IRS2Q9Y4H2 1338 aa3.38□□□□□ -1.87
LMNB1-207ENST00000494185 CCDC66A2RUB6 948 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 SGSM2O43147 1006 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 GAS7O60861 476 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 DNAJC8O75937 253 aaPredicted RBP3.37□□□□□ -1.87
LMNB1-207ENST00000494185 SRGAP2CP0DJJ0 459 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 ZSCAN22P10073 491 aaPredicted RBP3.37□□□□□ -1.87
LMNB1-207ENST00000494185 DNM2P50570 870 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 GYS2P54840 703 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 KIAA2012Q0VF49 1180 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 MAP3K12Q12852 859 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 SURF1Q15526 300 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 ZNF124Q15973 351 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 C21orf62-AS1Q17RA5 79 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 DALRD3Q5D0E6 543 aaKnown RBP3.37□□□□□ -1.87
LMNB1-207ENST00000494185 LCE1DQ5T752 114 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 PRAMEF18Q5VWM3 479 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 FAM129CQ86XR2 697 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 KRTAP19-1Q8IUB9 90 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 IFNL2Q8IZJ0 200 aa3.37□□□□□ -1.87
LMNB1-207ENST00000494185 C2orf69Q8N8R5 385 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms