RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 SUPT20HQ8NEM7 779 aa12.12□□□□□ -0.47
COL2A1-208ENST00000493991 DHTKD1Q96HY7 919 aaPredicted RBP12.12□□□□□ -0.47
COL2A1-208ENST00000493991 MTA3Q9BTC8 594 aa12.12□□□□□ -0.47
COL2A1-208ENST00000493991 PLEKP08567 350 aaPredicted RBP12.12□□□□□ -0.47
COL2A1-208ENST00000493991 TRIM14Q14142 442 aa12.12□□□□□ -0.47
COL2A1-208ENST00000493991 EAPPQ56P03 285 aaPredicted RBP12.12□□□□□ -0.47
COL2A1-208ENST00000493991 TMED8Q6PL24 325 aaPredicted RBP12.12□□□□□ -0.47
COL2A1-208ENST00000493991 NYAP1Q6ZVC0 841 aa12.12□□□□□ -0.47
COL2A1-208ENST00000493991 CCDC25Q86WR0 208 aa12.12□□□□□ -0.47
COL2A1-208ENST00000493991 PROCA1Q8NCQ7 364 aaPredicted RBP12.12□□□□□ -0.47
COL2A1-208ENST00000493991 SPZ1Q9BXG8 430 aa12.12□□□□□ -0.47
COL2A1-208ENST00000493991 PSMD14O00487 310 aa12.11□□□□□ -0.47
COL2A1-208ENST00000493991 NCK2O43639 380 aa12.11□□□□□ -0.47
COL2A1-208ENST00000493991 RCAN1P53805 252 aa12.11□□□□□ -0.47
COL2A1-208ENST00000493991 IFFO1Q0D2I5 559 aa12.11□□□□□ -0.47
COL2A1-208ENST00000493991 BPIFA3Q9BQP9 254 aa12.11□□□□□ -0.47
COL2A1-208ENST00000493991 SH2D4AQ9H788 454 aa12.11□□□□□ -0.47
COL2A1-208ENST00000493991 EEF1GP26641 437 aaKnown RBP12.11□□□□□ -0.47
COL2A1-208ENST00000493991 GFPT1Q06210 699 aaPredicted RBP12.11□□□□□ -0.47
COL2A1-208ENST00000493991 COASYQ13057 564 aa12.11□□□□□ -0.47
COL2A1-208ENST00000493991 PPM1KQ8N3J5 372 aa12.11□□□□□ -0.47
COL2A1-208ENST00000493991 ZMYND12Q9H0C1 365 aa12.11□□□□□ -0.47
COL2A1-208ENST00000493991 GOLPH3Q9H4A6 298 aa12.11□□□□□ -0.47
COL2A1-208ENST00000493991 DUSP10Q9Y6W6 482 aa12.11□□□□□ -0.47
COL2A1-208ENST00000493991 NDUFAB1O14561 156 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 RHBDL3P58872 404 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 NR1I3Q14994 352 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 IL17AQ16552 155 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 UHMK1Q8TAS1 419 aaKnown RBP12.1□□□□□ -0.47
COL2A1-208ENST00000493991 FAM76AQ8TAV0 307 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 DYDC2Q96IM9 177 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 TOPAZ1Q8N9V7 1692 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 GOLGA6CA6NDK9 693 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 LRRC53A6NM62 1247 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 LGALS16A8MUM7 142 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 POTEB2H3BUK9 544 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 LAD1O00515 517 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 KCNK3O14649 394 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 TADA3O75528 432 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 GFPT2O94808 682 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 GOLGA6DP0CG33 693 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 HMGB2P26583 209 aaKnown RBP12.1□□□□□ -0.47
COL2A1-208ENST00000493991 NMT1P30419 496 aaKnown RBP12.1□□□□□ -0.47
COL2A1-208ENST00000493991 RASA3Q14644 834 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 EXOC3L4Q17RC7 722 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 NUP58Q9BVL2 599 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 SH3GLB2Q9NR46 395 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 GOLGA6AQ9NYA3 693 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 CDC23Q9UJX2 597 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 MRPL11Q9Y3B7 192 aaKnown RBP12.1□□□□□ -0.47
COL2A1-208ENST00000493991 FHOD1Q9Y613 1164 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 FAM208AQ9UK61 1670 aaKnown RBP12.1□□□□□ -0.47
COL2A1-208ENST00000493991 TRIM49P0CI25 452 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 TRIM49CP0CI26 452 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 ACTN1P12814 892 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 DPEP1P16444 411 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 TNFAIP3P21580 790 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 CYP2C19P33261 490 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 ACTN2P35609 894 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 C2orf54Q08AI8 447 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 NLRX1Q86UT6 975 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 ADSSL1Q8N142 457 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 NOX5Q96PH1 765 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 COL4A3BPQ9Y5P4 624 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 SPATA31A6Q5VVP1 1343 aa12.1□□□□□ -0.47
COL2A1-208ENST00000493991 ZNF185O15231 689 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 ZBED4O75132 1171 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 CIAPIN1Q6FI81 312 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 SRGAP1Q7Z6B7 1085 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 SLFN12Q8IYM2 578 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 OTUD6BQ8N6M0 293 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 RABGGTAQ92696 567 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 ZHX2Q9Y6X8 837 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 A0A1B0GTH6 734 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 GSTTP1A0A1W2PQM5 241 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 FRMD3A2A2Y4 597 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 RSPH10B2B2RC85 870 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 ZBTB39O15060 712 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 RSPH10BP0C881 870 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 CKAP4Q07065 602 aaKnown RBP12.09□□□□□ -0.47
COL2A1-208ENST00000493991 MAN2A1Q16706 1144 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 NBPF9Q3BBW0 867 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 C8orf74Q6P047 294 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 SEPT14Q6ZU15 432 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 KCNK18Q7Z418 384 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 ANKRD35Q8N283 1001 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 BCAS4Q8TDM0 211 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 RAD54LQ92698 747 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 NAA15Q9BXJ9 866 aaKnown RBP12.09□□□□□ -0.47
COL2A1-208ENST00000493991 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-208ENST00000493991 CALUO43852 315 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-208ENST00000493991 FUT2Q10981 343 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 MKRN4PQ13434 485 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-208ENST00000493991 DGKZQ13574 1117 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 VWA3BQ502W6 1294 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 ZC2HC1CQ53FD0 456 aaPredicted RBP12.09□□□□□ -0.47
COL2A1-208ENST00000493991 PPP4R3AQ6IN85 833 aa12.09□□□□□ -0.47
COL2A1-208ENST00000493991 APOBEC3HQ6NTF7 200 aaKnown RBP12.09□□□□□ -0.47
COL2A1-208ENST00000493991 UNC13DQ70J99 1090 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms