RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 CYP2D6P10635 497 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 U2AF2P26368 475 aaKnown RBP eCLIP12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 BEX3Q00994 111 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 BMS1Q14692 1282 aaKnown RBP12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 ZRSR1Q15695 479 aaKnown RBP12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 BMP8AQ7Z5Y6 402 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 CCAR2Q8N163 923 aaKnown RBP12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 KCNG4Q8TDN1 519 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 GDPD5Q8WTR4 605 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 EAF2Q96CJ1 260 aaPredicted RBP12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 DDX11Q96FC9 970 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 FGD4Q96M96 766 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 CCDC8Q9H0W5 538 aaPredicted RBP12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 DNAJC25Q9H1X3 360 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 FBXO28Q9NVF7 368 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 ARGLU1Q9NWB6 273 aaPredicted RBP12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 DBNLQ9UJU6 430 aaKnown RBP12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 GNEQ9Y223 722 aaKnown RBP12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 PLXNA3P51805 1871 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 PHLPP2Q6ZVD8 1323 aa12.03□□□□□ -0.48
PDLIM1-205ENST00000493949 MYO15AQ9UKN7 3530 aa12.02□□□□□ -0.48
PDLIM1-205ENST00000493949 MPHOSPH10O00566 681 aaKnown RBP12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 IKBKBO14920 756 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 CBFA2T2O43439 604 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 DHX16O60231 1041 aaKnown RBP12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 BAIAP3O94812 1187 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 SKILP12757 684 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 CPA1P15085 419 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 EVCP57679 992 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 TUBB4BP68371 445 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 CCZ1BP86790 482 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 CCZ1P86791 482 aaPredicted RBP12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 ZP2Q05996 745 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 MCMDC2Q4G0Z9 681 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 ADALQ6DHV7 355 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 DHX32Q7L7V1 743 aaKnown RBP12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 BRAPQ7Z569 592 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 FILIP1Q7Z7B0 1213 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 CKAP2LQ8IYA6 745 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 ENGASEQ8NFI3 743 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 MRPS27Q92552 414 aaKnown RBP12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 FAM227BQ96M60 508 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 TIGD1Q96MW7 591 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 HAUS7Q99871 368 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 TEX13BQ9BXU2 312 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 SUGCTQ9HAC7 445 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 RTEL1Q9NZ71 1219 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 CALCOCO1Q9P1Z2 691 aa12.02□□□□□ -0.49
PDLIM1-205ENST00000493949 VPS13AQ96RL7 3174 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 CCDC69A6NI79 296 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 ATP2A1O14983 1001 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 SUPT20HL2P0C7V6 817 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 ERVK-21P61565 698 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 TNFAIP2Q03169 654 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 ICA1Q05084 483 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 PKN1Q16512 942 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 CAMK4Q16566 473 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 FSCN1Q16658 493 aaKnown RBP12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 CCDC158Q5M9N0 1113 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 ARMCX2Q7L311 632 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 DEFB128Q7Z7B8 93 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 ELOA2Q8IYF1 753 aaPredicted RBP12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 DYNLL2Q96FJ2 89 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 TNKSO95271 1327 aa12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 GREB1LQ9C091 1923 aaPredicted RBP12.01□□□□□ -0.49
PDLIM1-205ENST00000493949 C11orf97A0A1B0GVM6 126 aaPredicted RBP12□□□□□ -0.49
PDLIM1-205ENST00000493949 LCHNA4D1U4 455 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 RBAK-RBAKDNI3L0D1 243 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 ZEB2O60315 1214 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 GFRA3O60609 400 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 POLR3DP05423 398 aaPredicted RBP12□□□□□ -0.49
PDLIM1-205ENST00000493949 H2AFXP16104 143 aaPredicted RBP12□□□□□ -0.49
PDLIM1-205ENST00000493949 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
PDLIM1-205ENST00000493949 SLC20A2Q08357 652 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 TCF15Q12870 199 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 LRMPQ12912 555 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 COL19A1Q14993 1142 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 HERC4Q5GLZ8 1057 aaPredicted RBP12□□□□□ -0.49
PDLIM1-205ENST00000493949 ZNF771Q7L3S4 317 aaPredicted RBP12□□□□□ -0.49
PDLIM1-205ENST00000493949 ERMP1Q7Z2K6 904 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 TLK2Q86UE8 772 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 FERMT3Q86UX7 667 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 ADHFE1Q8IWW8 467 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 CCDC144CPQ8IYA2 1237 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 NSUN7Q8NE18 718 aaKnown RBP12□□□□□ -0.49
PDLIM1-205ENST00000493949 RIOK1Q9BRS2 568 aaKnown RBP12□□□□□ -0.49
PDLIM1-205ENST00000493949 POLR3EQ9NVU0 708 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 SWAP70Q9UH65 585 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 FAM50BQ9Y247 325 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 Q9Y3F1 56 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 RIPK3Q9Y572 518 aa12□□□□□ -0.49
PDLIM1-205ENST00000493949 KMT2BQ9UMN6 2715 aaPredicted RBP12□□□□□ -0.49
PDLIM1-205ENST00000493949 MYH4Q9Y623 1939 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 MYO7AQ13402 2215 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 ZNF292O60281 2723 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 SNPHO15079 494 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 IQCF3P0C7M6 154 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 CYP2C9P11712 490 aa11.99□□□□□ -0.49
PDLIM1-205ENST00000493949 AKR1B1P15121 316 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms