RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 GPNMBQ14956 572 aa27.22■■□□□ 1.95
RHBDD3-206ENST00000493894 APOA5Q6Q788 366 aa27.22■■□□□ 1.95
RHBDD3-206ENST00000493894 HEATR3Q7Z4Q2 680 aa27.22■■□□□ 1.95
RHBDD3-206ENST00000493894 PPM1EQ8WY54 764 aa27.22■■□□□ 1.95
RHBDD3-206ENST00000493894 WNT8BQ93098 351 aa27.22■■□□□ 1.95
RHBDD3-206ENST00000493894 GPR20Q99678 358 aa27.22■■□□□ 1.95
RHBDD3-206ENST00000493894 RBM28Q9NW13 759 aaKnown RBP27.22■■□□□ 1.95
RHBDD3-206ENST00000493894 NBNO60934 754 aa27.21■■□□□ 1.95
RHBDD3-206ENST00000493894 SMIM10L2AP0DMW4 78 aa27.21■■□□□ 1.95
RHBDD3-206ENST00000493894 SMIM10L2BP0DMW5 78 aa27.21■■□□□ 1.95
RHBDD3-206ENST00000493894 WDR5P61964 334 aaKnown RBP27.21■■□□□ 1.95
RHBDD3-206ENST00000493894 HIC1Q14526 733 aa27.21■■□□□ 1.95
RHBDD3-206ENST00000493894 ZNF618Q5T7W0 954 aa27.21■■□□□ 1.95
RHBDD3-206ENST00000493894 SERINC5Q86VE9 423 aa27.21■■□□□ 1.95
RHBDD3-206ENST00000493894 SENP7Q9BQF6 1050 aa27.21■■□□□ 1.95
RHBDD3-206ENST00000493894 CHD7Q9P2D1 2997 aa27.21■■□□□ 1.95
RHBDD3-206ENST00000493894 ZNF215Q9UL58 517 aaPredicted RBP27.21■■□□□ 1.95
RHBDD3-206ENST00000493894 DOCK5Q9H7D0 1870 aa27.21■■□□□ 1.95
RHBDD3-206ENST00000493894 SPDYE3A6NKU9 549 aa27.2■■□□□ 1.94
RHBDD3-206ENST00000493894 KRT32Q14532 448 aa27.2■■□□□ 1.94
RHBDD3-206ENST00000493894 UBE2SQ16763 222 aa27.2■■□□□ 1.94
RHBDD3-206ENST00000493894 DHX32Q7L7V1 743 aaKnown RBP27.2■■□□□ 1.94
RHBDD3-206ENST00000493894 GIMAP8Q8ND71 665 aaPredicted RBP27.2■■□□□ 1.94
RHBDD3-206ENST00000493894 ATP6V0A1Q93050 837 aa27.2■■□□□ 1.94
RHBDD3-206ENST00000493894 GPRASP2Q96D09 838 aa27.2■■□□□ 1.94
RHBDD3-206ENST00000493894 CDHR1Q96JP9 859 aa27.2■■□□□ 1.94
RHBDD3-206ENST00000493894 EMSYQ7Z589 1322 aa27.19■■□□□ 1.94
RHBDD3-206ENST00000493894 CNTNAP5Q8WYK1 1306 aa27.19■■□□□ 1.94
RHBDD3-206ENST00000493894 HOXC8P31273 242 aa27.19■■□□□ 1.94
RHBDD3-206ENST00000493894 SP4Q02446 784 aa27.19■■□□□ 1.94
RHBDD3-206ENST00000493894 TRAF7Q6Q0C0 670 aa27.19■■□□□ 1.94
RHBDD3-206ENST00000493894 TCEANC2Q96MN5 208 aa27.19■■□□□ 1.94
RHBDD3-206ENST00000493894 MYO9BQ13459 2157 aa27.19■■□□□ 1.94
RHBDD3-206ENST00000493894 ABHD14A-ACY1A0A1B0GW23 586 aa27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 ZBTB43O43298 467 aa27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 TLL1O43897 1013 aa27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 EFCAB14O75071 495 aa27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 THPOP40225 353 aa27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 EXOSC10Q01780 885 aaKnown RBP27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 RTN1Q16799 776 aa27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 ADCK5Q3MIX3 580 aa27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 TSGA10IPQ3SY00 556 aa27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 TRIM50Q86XT4 487 aa27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 EHMT1Q9H9B1 1298 aa27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 PTPRSQ13332 1948 aa27.18■■□□□ 1.94
RHBDD3-206ENST00000493894 UTP14CQ5TAP6 766 aaKnown RBP27.17■■□□□ 1.94
RHBDD3-206ENST00000493894 RASEFQ8IZ41 740 aa27.17■■□□□ 1.94
RHBDD3-206ENST00000493894 RSPH10B2B2RC85 870 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 LGR5O75473 907 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 HMGB1P09429 215 aaKnown RBP27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 RSPH10BP0C881 870 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 GNAT1P11488 350 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 DEFB103AP81534 67 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 IKBKEQ14164 716 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 MBTPS1Q14703 1052 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 CCDC85BQ15834 202 aaPredicted RBP27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 WWC2Q6AWC2 1192 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 ZBED2Q9BTP6 218 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 RNPEPQ9H4A4 650 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 THEGQ9P2T0 379 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 BRPF3Q9ULD4 1205 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 PCDHA6Q9UN73 950 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 PCDHA8Q9Y5H6 950 aa27.16■■□□□ 1.94
RHBDD3-206ENST00000493894 GOLGA8AA7E2F4 631 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 GOLGA8BA8MQT2 603 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 TREHO43280 583 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 CAND2O75155 1236 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 KCNA2P16389 499 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 ITGB5P18084 799 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 NAPAP54920 295 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 TAP1Q03518 808 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 MTMR1Q13613 665 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 TCTN1Q2MV58 587 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 PPP1R18Q6NYC8 613 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 SYMPKQ92797 1274 aaKnown RBP27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 CERS4Q9HA82 394 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 PRDM6Q9NQX0 595 aa27.15■■□□□ 1.94
RHBDD3-206ENST00000493894 KLF18A0A0U1RQI7 1052 aa27.14■■□□□ 1.94
RHBDD3-206ENST00000493894 hCG_1984214I3L0E3 225 aa27.14■■□□□ 1.94
RHBDD3-206ENST00000493894 TJAP1Q5JTD0 557 aa27.14■■□□□ 1.94
RHBDD3-206ENST00000493894 ZNF713Q8N859 430 aaPredicted RBP27.14■■□□□ 1.94
RHBDD3-206ENST00000493894 SETD4Q9NVD3 440 aa27.14■■□□□ 1.94
RHBDD3-206ENST00000493894 TELO2Q9Y4R8 837 aa27.14■■□□□ 1.94
RHBDD3-206ENST00000493894 UBIAD1Q9Y5Z9 338 aa27.14■■□□□ 1.94
RHBDD3-206ENST00000493894 VCANP13611 3396 aa27.13■■□□□ 1.93
RHBDD3-206ENST00000493894 TCF7P36402 384 aaPredicted RBP27.13■■□□□ 1.93
RHBDD3-206ENST00000493894 RCAN1P53805 252 aa27.13■■□□□ 1.93
RHBDD3-206ENST00000493894 FGD1P98174 961 aa27.13■■□□□ 1.93
RHBDD3-206ENST00000493894 TMCO2Q7Z6W1 182 aaPredicted RBP27.13■■□□□ 1.93
RHBDD3-206ENST00000493894 TEX2Q8IWB9 1127 aa27.13■■□□□ 1.93
RHBDD3-206ENST00000493894 MICALL1Q8N3F8 863 aa27.13■■□□□ 1.93
RHBDD3-206ENST00000493894 ARNTL2Q8WYA1 636 aa27.13■■□□□ 1.93
RHBDD3-206ENST00000493894 CCDC136Q96JN2 1154 aa27.13■■□□□ 1.93
RHBDD3-206ENST00000493894 GTPBP6O43824 516 aaPredicted RBP27.12■■□□□ 1.93
RHBDD3-206ENST00000493894 ATP9AO75110 1047 aa27.12■■□□□ 1.93
RHBDD3-206ENST00000493894 ARHGEF15O94989 841 aa27.12■■□□□ 1.93
RHBDD3-206ENST00000493894 FUT2Q10981 343 aa27.12■■□□□ 1.93
RHBDD3-206ENST00000493894 JADE2Q9NQC1 790 aa27.12■■□□□ 1.93
RHBDD3-206ENST00000493894 PKD2L1Q9P0L9 805 aa27.12■■□□□ 1.93
RHBDD3-206ENST00000493894 MAFGO15525 162 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms