RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 TANGO6Q9C0B7 1094 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 EHMT1Q9H9B1 1298 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 CEP72Q9P209 647 aa10.68□□□□□ -0.7
NPHP3-209ENST00000493732 CETN3O15182 167 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 CYP3A4P08684 503 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 PLA2G4AP47712 749 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 ITIH3Q06033 890 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 MAPK8IP2Q13387 824 aaPredicted RBP10.67□□□□□ -0.7
NPHP3-209ENST00000493732 SLC9C1Q4G0N8 1177 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 ZNF772Q68DY9 489 aaPredicted RBP10.67□□□□□ -0.7
NPHP3-209ENST00000493732 ZFPM1Q8IX07 1006 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 RNF10Q8N5U6 811 aaKnown RBP10.67□□□□□ -0.7
NPHP3-209ENST00000493732 ETNPPLQ8TBG4 499 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 HPS3Q969F9 1004 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 FUT8Q9BYC5 575 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 UBXN6Q9BZV1 441 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 ZSWIM4Q9H7M6 989 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 ANKZF1Q9H8Y5 726 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 ARHGEF10LQ9HCE6 1279 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 TSKSQ9UJT2 592 aa10.67□□□□□ -0.7
NPHP3-209ENST00000493732 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.67□□□□□ -0.7
NPHP3-209ENST00000493732 MYH7BA7E2Y1 1941 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 MAP2K7O14733 419 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 NDUFB10O96000 172 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 CYP11B2P19099 503 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 MUTP22033 750 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 EPS15P42566 896 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 KIF11P52732 1056 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 SMC1AQ14683 1233 aaKnown RBP10.66□□□□□ -0.7
NPHP3-209ENST00000493732 ZC3H3Q8IXZ2 948 aaKnown RBP10.66□□□□□ -0.7
NPHP3-209ENST00000493732 SYT2Q8N9I0 419 aaPredicted RBP10.66□□□□□ -0.7
NPHP3-209ENST00000493732 POLR3CQ9BUI4 534 aaPredicted RBP10.66□□□□□ -0.7
NPHP3-209ENST00000493732 FAM207AQ9NSI2 230 aaPredicted RBP10.66□□□□□ -0.7
NPHP3-209ENST00000493732 PCDHA13Q9Y5I0 950 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 COL11A2P13942 1736 aaPredicted RBP10.66□□□□□ -0.7
NPHP3-209ENST00000493732 E9PMD0 336 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 PJA2O43164 708 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 SERPING1P05155 500 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 GAP43P17677 238 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 TCP1P17987 556 aaKnown RBP10.66□□□□□ -0.7
NPHP3-209ENST00000493732 RPL13P26373 211 aaKnown RBP10.66□□□□□ -0.7
NPHP3-209ENST00000493732 KLK7P49862 253 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 SLC12A3P55017 1021 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 ECM1Q16610 540 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 PRR16Q569H4 304 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 BEND6Q5SZJ8 279 aaPredicted RBP10.66□□□□□ -0.7
NPHP3-209ENST00000493732 PDXDC1Q6P996 788 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 RRAGAQ7L523 313 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 SH3BP5LQ7L8J4 393 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 SIAH1Q8IUQ4 282 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 TRIM59Q8IWR1 403 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 EEF2KMTQ96G04 330 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 SH2D4AQ9H788 454 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 METTL14Q9HCE5 456 aaKnown RBP10.66□□□□□ -0.7
NPHP3-209ENST00000493732 GOPCQ9HD26 462 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 HDAC9Q9UKV0 1011 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 PCDHA2Q9Y5H9 948 aa10.66□□□□□ -0.7
NPHP3-209ENST00000493732 POTEB3A0JP26 581 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 POTECB2RU33 542 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 RBAK-RBAKDNI3L0D1 243 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 CALUO43852 315 aaPredicted RBP10.65□□□□□ -0.7
NPHP3-209ENST00000493732 SEC31AO94979 1220 aaKnown RBP10.65□□□□□ -0.7
NPHP3-209ENST00000493732 ABL1P00519 1130 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 ZNF76P36508 570 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 EIF4A3P38919 411 aaKnown RBP10.65□□□□□ -0.7
NPHP3-209ENST00000493732 MAGEA1P43355 309 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 ADAM9Q13443 819 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 LRRC41Q15345 812 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 C10orf76Q5T2E6 689 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 SFMBT2Q5VUG0 894 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 TAF3Q5VWG9 929 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 POTEBQ6S5H4 581 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 FRMD5Q7Z6J6 570 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 CAGE1Q8TC20 777 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 CHURC1Q8WUH1 139 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 CSRNP1Q96S65 589 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 ARHGAP20Q9P2F6 1191 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 RNF14Q9UBS8 474 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 TRAF3IP3Q9Y228 551 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 RABGAP1Q9Y3P9 1069 aa10.65□□□□□ -0.7
NPHP3-209ENST00000493732 BZW2Q9Y6E2 419 aaKnown RBP10.65□□□□□ -0.7
NPHP3-209ENST00000493732 CCDC66A2RUB6 948 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 LRRC53A6NM62 1247 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 PDXKO00764 312 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 PLA2G6O60733 806 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 ATP1A1P05023 1023 aaKnown RBP10.64□□□□□ -0.71
NPHP3-209ENST00000493732 ANXA13P27216 316 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 STAT2P52630 851 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 CACNB3P54284 484 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 USP14P54578 494 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 SPIRE1Q08AE8 756 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 NCAPH2Q6IBW4 605 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 CATSPER3Q86XQ3 398 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 SCFD1Q8WVM8 642 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 BAP1Q92560 729 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 LACRTQ9GZZ8 138 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 EPC1Q9H2F5 836 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 KCTD10Q9H3F6 313 aa10.64□□□□□ -0.71
NPHP3-209ENST00000493732 VIPAS39Q9H9C1 493 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms