RNA–Protein interactions for RNA: ENST00000493647.1

RHBDF1-211, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-211ENST00000493647 KIAA1217Q5T5P2 1943 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 NFASCO94856 1347 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 IPO5O00410 1097 aaKnown RBP13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 SGPL1O95470 568 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 CCNE2O96020 404 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 GJA8P48165 433 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 MNX1P50219 401 aaPredicted RBP13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 BEX3Q00994 111 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 NEDD9Q14511 834 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 LRRC41Q15345 812 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 RILPL1Q5EBL4 403 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 CCSAPQ6IQ19 270 aaPredicted RBP13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 DHX37Q8IY37 1157 aaKnown RBP13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 KLHDC9Q8NEP7 349 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 AFG1LQ8WV93 481 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 EMID1Q96A84 441 aaPredicted RBP13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 MTMR9Q96QG7 549 aa13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 ZSCAN16Q9H4T2 348 aaPredicted RBP13.72□□□□□ -0.21
RHBDF1-211ENST00000493647 DDX39AO00148 427 aaKnown RBP13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 NEMFO60524 1076 aa13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 PSMD10O75832 226 aa13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 PDIA4P13667 645 aaKnown RBP13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 SP4Q02446 784 aa13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 LAMC2Q13753 1193 aa13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 HSDL1Q3SXM5 330 aa13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 METTL7BQ6UX53 244 aa13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 B3GNT9Q6UX72 402 aa13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 CHAMP1Q96JM3 812 aa13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 SPATA33Q96N06 139 aa13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 IPO9Q96P70 1041 aaKnown RBP13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 TMEM106CQ9BVX2 250 aa13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 AP5M1Q9H0R1 490 aa13.71□□□□□ -0.21
RHBDF1-211ENST00000493647 GSTTP1A0A1W2PQM5 241 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 A6NJR5 290 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 TBX3O15119 743 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 TFRCP02786 760 aaKnown RBP13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 MMP3P08254 477 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 C6orf222P0C671 652 aaPredicted RBP13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 HOXD8P13378 290 aaPredicted RBP13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 CST5P28325 142 aaPredicted RBP13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 ORC2Q13416 577 aaPredicted RBP13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 CALCRLQ16602 461 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 FSCN1Q16658 493 aaKnown RBP13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 FOXD4L6Q3SYB3 417 aaPredicted RBP13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 FOXD4L3Q6VB84 417 aaPredicted RBP13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 PPTC7Q8NI37 304 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 USP28Q96RU2 1077 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 RIT2Q99578 217 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 GPR20Q99678 358 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 SDF4Q9BRK5 362 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 UNC45AQ9H3U1 944 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 MLXIPQ9HAP2 919 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 JPH1Q9HDC5 661 aaPredicted RBP13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 SLC9A2Q9UBY0 812 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 DAXXQ9UER7 740 aaPredicted RBP13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 VAV3Q9UKW4 847 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 CLIC4Q9Y696 253 aa13.7□□□□□ -0.22
RHBDF1-211ENST00000493647 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 OR52Z1P0C646 297 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 EN2P19622 333 aaPredicted RBP13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 SPIRE1Q08AE8 756 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 PTGDRQ13258 359 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 PTPAQ15257 358 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 KCNA10Q16322 511 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 IL17AQ16552 155 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 LRCH2Q5VUJ6 765 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 GIMAP8Q8ND71 665 aaPredicted RBP13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 DIS3LQ8TF46 1054 aaKnown RBP13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 FAM20AQ96MK3 541 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 PCYT2Q99447 389 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 TEKT3Q9BXF9 490 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 TBC1D22BQ9NU19 505 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 KIAA0100Q14667 2235 aaKnown RBP13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 FRMPD3Q5JV73 1810 aa13.69□□□□□ -0.22
RHBDF1-211ENST00000493647 EML1O00423 815 aa13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 GAS7O60861 476 aa13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 SOX10P56693 466 aa13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 ACTR2P61160 394 aa13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 ATP2C1P98194 919 aaPredicted RBP13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 SF3A1Q15459 793 aaKnown RBP13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 GNASQ5JWF2 1037 aa13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 RNF180Q86T96 592 aa13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 ARRDC4Q8NCT1 418 aa13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 SPC25Q9HBM1 224 aa13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 TFIP11Q9UBB9 837 aaKnown RBP13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 CIZ1Q9ULV3 898 aaPredicted RBP13.68□□□□□ -0.22
RHBDF1-211ENST00000493647 ELP1O95163 1332 aa13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 CCDC85CA6NKD9 419 aa13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 DNM1LO00429 736 aa13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 CHMP2AO43633 222 aa13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 ATG7O95352 703 aa13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 MYL3P08590 195 aa13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 ZNF286BP0CG31 522 aa13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 TXKP42681 527 aa13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 NASPP49321 788 aaPredicted RBP13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 CPT1AP50416 773 aa13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 NUCB2P80303 420 aa13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 PURAQ00577 322 aaKnown RBP13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 KRT76Q01546 638 aa13.67□□□□□ -0.22
RHBDF1-211ENST00000493647 CEBPZQ03701 1054 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms