RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 CDX2Q99626 313 aaPredicted RBP6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 SENP7Q9BQF6 1050 aa6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 NOC4LQ9BVI4 516 aaKnown RBP6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 SPZ1Q9BXG8 430 aa6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 USP26Q9BXU7 913 aa6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 LNPKQ9C0E8 428 aa6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 BCL11AQ9H165 835 aa6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 SEC63Q9UGP8 760 aaKnown RBP6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 ZNF215Q9UL58 517 aaPredicted RBP6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 RWDD3Q9Y3V2 267 aa6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 MYH6P13533 1939 aa6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 KIAA1217Q5T5P2 1943 aa6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 MCM3APO60318 1980 aa6.69□□□□□ -1.34
RTN4IP1-202ENST00000493619 COL6A3P12111 3177 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 PIK3CDO00329 1044 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 DHX16O60231 1041 aaKnown RBP6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 KDM4AO75164 1064 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 BRD1O95696 1058 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 F2P00734 622 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 CSF2RAP15509 400 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 CALML3P27482 149 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 CCND2P30279 289 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 ICAM3P32942 547 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 KRT32Q14532 448 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 PUS10Q3MIT2 529 aaKnown RBP6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 SLFNL1Q499Z3 407 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 MUM1L1Q5H9M0 696 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 TMEM67Q5HYA8 995 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 ODR4Q5SWX8 454 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 VPS53Q5VIR6 699 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 ANO1Q5XXA6 986 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 TSHZ3Q63HK5 1081 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 CCDC62Q6P9F0 684 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 CNKSR3Q6P9H4 555 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 CWC27Q6UX04 472 aaKnown RBP6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 FBXO16Q8IX29 292 aaPredicted RBP6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 ADGRF4Q8IZF3 695 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 C7orf31Q8N865 590 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 ENAHQ8N8S7 591 aaPredicted RBP6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 CTCFLQ8NI51 663 aaPredicted RBP6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 ZNF516Q92618 1163 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 FAM227BQ96M60 508 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 RIOX1Q9H6W3 641 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 ZSWIM5Q9P217 1185 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 THEGQ9P2T0 379 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 FAM50BQ9Y247 325 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 FRMPD4Q14CM0 1322 aa6.68□□□□□ -1.34
RTN4IP1-202ENST00000493619 PNMA6FA0A0J9YX94 578 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 CCDC196A0A1B0GTZ2 297 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 PALM3A6NDB9 673 aaPredicted RBP6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 KLRF2D3W0D1 207 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 GCOM1H8Y6P7 765 aaPredicted RBP6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 NFIBO00712 420 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 FIBPO43427 364 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 B4GALT4O60513 344 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 RNF40O75150 1001 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 CXCL10P02778 98 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 OATP04181 439 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 POLR2MP0CAP2 368 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 SELPP16109 830 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 ATP2A2P16615 1042 aaKnown RBP6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 MCM5P33992 734 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 LIFRP42702 1097 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 SLC26A2P50443 739 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 MRPS5P82675 430 aaKnown RBP6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 IKBKEQ14164 716 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 WTAPQ15007 396 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 C9orf50Q5SZB4 431 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 TTC22Q5TAA0 569 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 PPP2R2DQ66LE6 453 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 TAF2Q6P1X5 1199 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 SYNE3Q6ZMZ3 975 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 ZNF365Q70YC5 407 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 SH3RF1Q7Z6J0 888 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 RPAINQ86UA6 219 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 RSPH3Q86UC2 560 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 ZNF589Q86UQ0 364 aaPredicted RBP6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 NLRX1Q86UT6 975 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 DHX37Q8IY37 1157 aaKnown RBP6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 STK11IPQ8N1F8 1099 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 USP38Q8NB14 1042 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 SYTL5Q8TDW5 730 aaPredicted RBP6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 PXMP2Q9NR77 195 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 RBM28Q9NW13 759 aaKnown RBP6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 CXXC1Q9P0U4 656 aaPredicted RBP6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 GTF2IRD1Q9UHL9 959 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 MRVI1Q9Y6F6 885 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 SQORQ9Y6N5 450 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 ASTN1O14525 1302 aa6.67□□□□□ -1.34
RTN4IP1-202ENST00000493619 LCTP09848 1927 aa6.66□□□□□ -1.34
RTN4IP1-202ENST00000493619 NOP56O00567 594 aaKnown RBP6.66□□□□□ -1.34
RTN4IP1-202ENST00000493619 AP1G2O75843 785 aa6.66□□□□□ -1.34
RTN4IP1-202ENST00000493619 FOSP01100 380 aaPredicted RBP6.66□□□□□ -1.34
RTN4IP1-202ENST00000493619 CHGBP05060 677 aa6.66□□□□□ -1.34
RTN4IP1-202ENST00000493619 NR3C2P08235 984 aa6.66□□□□□ -1.34
RTN4IP1-202ENST00000493619 MMP3P08254 477 aa6.66□□□□□ -1.34
RTN4IP1-202ENST00000493619 IQCF3P0C7M6 154 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms