RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 CDADC1Q9BWV3 514 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 C1orf112Q9NSG2 853 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 CLDND1Q9NY35 253 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 PCDHA11Q9Y5I1 949 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 SSU72P8A0A1W2PR75 194 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 KDM1AO60341 852 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 FKTNO75072 461 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 OFD1O75665 1012 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 SYPP08247 313 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 KIF11P52732 1056 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 LACTBP83111 547 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-212ENST00000493341 PLA2G4EQ3MJ16 856 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 ANO1Q5XXA6 986 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 ERAP2Q6P179 960 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 B3GNT9Q6UX72 402 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 EP400NLQ6ZTU2 488 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 CATIPQ7Z7H3 387 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 GIMAP7Q8NHV1 300 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 RUNDC1Q96C34 613 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 TAAR9Q96RI9 348 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 UBL7Q96S82 380 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-212ENST00000493341 SP110Q9HB58 689 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 SMURF1Q9HCE7 757 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 DDX21Q9NR30 783 aaKnown RBP eCLIP5.86□□□□□ -1.47
VPS13A-212ENST00000493341 CCM2LQ9NUG4 571 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-212ENST00000493341 PHTF1Q9UMS5 762 aa5.86□□□□□ -1.47
VPS13A-212ENST00000493341 TIMM13Q9Y5L4 95 aaPredicted RBP5.86□□□□□ -1.47
VPS13A-212ENST00000493341 TCEA3O75764 348 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 CENPBP07199 599 aaPredicted RBP5.85□□□□□ -1.47
VPS13A-212ENST00000493341 SLURP2P0DP57 97 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 GNAT1P11488 350 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 PTX3P26022 381 aaPredicted RBP5.85□□□□□ -1.47
VPS13A-212ENST00000493341 USP14P54578 494 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 PHC1P78364 1004 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 RTP2Q5QGT7 225 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 C1orf228Q6PIY5 440 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 ARHGAP36Q6ZRI8 547 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 MIER2Q8N344 545 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 ZNF610Q8N9Z0 462 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 MYRIPQ8NFW9 859 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 SLC16A10Q8TF71 515 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 JADE3Q92613 823 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.85□□□□□ -1.47
VPS13A-212ENST00000493341 ZDHHC5Q9C0B5 715 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 RNF38Q9H0F5 515 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 KCNF1Q9H3M0 494 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 PLCB1Q9NQ66 1216 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 DNAJC28Q9NX36 388 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 TERF2IPQ9NYB0 399 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 TCFL5Q9UL49 500 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 DNM3Q9UQ16 869 aa5.85□□□□□ -1.47
VPS13A-212ENST00000493341 ZNF561-AS1K7EIQ3 104 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 FGAP02671 866 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 ZBTB48P10074 688 aaPredicted RBP5.84□□□□□ -1.47
VPS13A-212ENST00000493341 MAP4P27816 1152 aaKnown RBP5.84□□□□□ -1.47
VPS13A-212ENST00000493341 PCBP3P57721 371 aaKnown RBP5.84□□□□□ -1.47
VPS13A-212ENST00000493341 LLGL1Q15334 1064 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.84□□□□□ -1.47
VPS13A-212ENST00000493341 SRLQ86TD4 932 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 PTRH1Q86Y79 214 aaKnown RBP5.84□□□□□ -1.47
VPS13A-212ENST00000493341 MFSD4AQ8N468 514 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 PAF1Q8N7H5 531 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 GJA10Q969M2 543 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 TMEM169Q96HH4 297 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 PTCHD1Q96NR3 888 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 ACO2Q99798 780 aaKnown RBP5.84□□□□□ -1.47
VPS13A-212ENST00000493341 FOXP3Q9BZS1 431 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 CSRNP2Q9H175 543 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 CDIP1Q9H305 208 aa5.84□□□□□ -1.47
VPS13A-212ENST00000493341 C7orf72A4D263 438 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 DVL2O14641 736 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 TBX3O15119 743 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 ZNF205O95201 554 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 TBC1D8O95759 1140 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 COL6A2P12110 1019 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 ZNF280AP59817 542 aaPredicted RBP5.84□□□□□ -1.48
VPS13A-212ENST00000493341 RPL11P62913 178 aaKnown RBP5.84□□□□□ -1.48
VPS13A-212ENST00000493341 CHAF1AQ13111 956 aaPredicted RBP5.84□□□□□ -1.48
VPS13A-212ENST00000493341 PRRT3Q5FWE3 981 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 CYB5RLQ6IPT4 315 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 CEP68Q76N32 757 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 USHBP1Q8N6Y0 703 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 NAT16Q8N8M0 369 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 ANKRD42Q8N9B4 389 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 PIWIL2Q8TC59 973 aaKnown RBP5.84□□□□□ -1.48
VPS13A-212ENST00000493341 UTP4Q969X6 686 aaKnown RBP5.84□□□□□ -1.48
VPS13A-212ENST00000493341 FAM46AQ96IP4 442 aaKnown RBP5.84□□□□□ -1.48
VPS13A-212ENST00000493341 SLC2A13Q96QE2 648 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 GPR62Q9BZJ7 368 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 DUSP15Q9H1R2 295 aaPredicted RBP5.84□□□□□ -1.48
VPS13A-212ENST00000493341 NLRC4Q9NPP4 1024 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 GTF2IRD1Q9UHL9 959 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 DMTF1Q9Y222 760 aa5.84□□□□□ -1.48
VPS13A-212ENST00000493341 WASH4PA8MWX3 477 aa5.83□□□□□ -1.48
VPS13A-212ENST00000493341 FAM155AB1AL88 458 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-212ENST00000493341 TPP1O14773 563 aa5.83□□□□□ -1.48
VPS13A-212ENST00000493341 FGF10O15520 208 aaPredicted RBP5.83□□□□□ -1.48
VPS13A-212ENST00000493341 HIP1RO75146 1068 aa5.83□□□□□ -1.48
VPS13A-212ENST00000493341 AMY2AP04746 511 aa5.83□□□□□ -1.48
VPS13A-212ENST00000493341 OSMP13725 252 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms