RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 GJC2Q5T442 439 aaPredicted RBP19.45■□□□□ 0.7
LIME1-208ENST00000493265 COPS5Q92905 334 aa19.45■□□□□ 0.7
LIME1-208ENST00000493265 LENG1Q96BZ8 264 aaPredicted RBP19.45■□□□□ 0.7
LIME1-208ENST00000493265 CDHR1Q96JP9 859 aa19.45■□□□□ 0.7
LIME1-208ENST00000493265 KIAA1217Q5T5P2 1943 aa19.45■□□□□ 0.7
LIME1-208ENST00000493265 IPO5O00410 1097 aaKnown RBP19.44■□□□□ 0.7
LIME1-208ENST00000493265 ATP9AO75110 1047 aa19.44■□□□□ 0.7
LIME1-208ENST00000493265 BAG4O95429 457 aaKnown RBP19.44■□□□□ 0.7
LIME1-208ENST00000493265 TXKP42681 527 aa19.44■□□□□ 0.7
LIME1-208ENST00000493265 SP2Q02086 613 aa19.44■□□□□ 0.7
LIME1-208ENST00000493265 SP4Q02446 784 aa19.44■□□□□ 0.7
LIME1-208ENST00000493265 TNFAIP2Q03169 654 aa19.44■□□□□ 0.7
LIME1-208ENST00000493265 STK38Q15208 465 aa19.44■□□□□ 0.7
LIME1-208ENST00000493265 NECAB2Q7Z6G3 386 aa19.44■□□□□ 0.7
LIME1-208ENST00000493265 TNPO1Q92973 898 aaKnown RBP19.44■□□□□ 0.7
LIME1-208ENST00000493265 BCAS3Q9H6U6 928 aa19.44■□□□□ 0.7
LIME1-208ENST00000493265 DDX41Q9UJV9 622 aaKnown RBP19.44■□□□□ 0.7
LIME1-208ENST00000493265 FAM184BQ9ULE4 1060 aa19.44■□□□□ 0.7
LIME1-208ENST00000493265 CEP131Q9UPN4 1083 aa19.44■□□□□ 0.7
LIME1-208ENST00000493265 SOX1O00570 391 aaPredicted RBP19.43■□□□□ 0.7
LIME1-208ENST00000493265 OR52Z1P0C646 297 aa19.43■□□□□ 0.7
LIME1-208ENST00000493265 SMPD1P17405 629 aa19.43■□□□□ 0.7
LIME1-208ENST00000493265 CAPN2P17655 700 aa19.43■□□□□ 0.7
LIME1-208ENST00000493265 UBA1P22314 1058 aaKnown RBP19.43■□□□□ 0.7
LIME1-208ENST00000493265 ICAM3P32942 547 aa19.43■□□□□ 0.7
LIME1-208ENST00000493265 KRT85P78386 507 aa19.43■□□□□ 0.7
LIME1-208ENST00000493265 IQSEC1Q6DN90 963 aa19.43■□□□□ 0.7
LIME1-208ENST00000493265 KCNV1Q6PIU1 500 aa19.43■□□□□ 0.7
LIME1-208ENST00000493265 C7orf61Q8IZ16 206 aa19.43■□□□□ 0.7
LIME1-208ENST00000493265 ETNPPLQ8TBG4 499 aa19.43■□□□□ 0.7
LIME1-208ENST00000493265 NRBP1Q9UHY1 535 aa19.43■□□□□ 0.7
LIME1-208ENST00000493265 RBM47A0AV96 593 aaKnown RBP19.42■□□□□ 0.7
LIME1-208ENST00000493265 MAFGO15525 162 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 ADCY6O43306 1168 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 GAS7O60861 476 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 GGPS1O95749 300 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 MARCKSP29966 332 aaPredicted RBP19.42■□□□□ 0.7
LIME1-208ENST00000493265 ITGB3BPQ13352 177 aaPredicted RBP19.42■□□□□ 0.7
LIME1-208ENST00000493265 ORC2Q13416 577 aaPredicted RBP19.42■□□□□ 0.7
LIME1-208ENST00000493265 TPRNQ4KMQ1 711 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 LRCH2Q5VUJ6 765 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 CCDC62Q6P9F0 684 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 CYFIP1Q7L576 1253 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 C4orf32Q8N8J7 132 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 HAS1Q92839 578 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 SDF4Q9BRK5 362 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 HMX1Q9NP08 348 aaPredicted RBP19.42■□□□□ 0.7
LIME1-208ENST00000493265 KCNMB3Q9NPA1 279 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 POLR3EQ9NVU0 708 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 CFAP45Q9UL16 551 aa19.42■□□□□ 0.7
LIME1-208ENST00000493265 A0A1W2PPC1 479 aa19.41■□□□□ 0.7
LIME1-208ENST00000493265 CHMP2AO43633 222 aa19.41■□□□□ 0.7
LIME1-208ENST00000493265 TGFB3P10600 412 aa19.41■□□□□ 0.7
LIME1-208ENST00000493265 AKR1A1P14550 325 aa19.41■□□□□ 0.7
LIME1-208ENST00000493265 KCNA2P16389 499 aa19.41■□□□□ 0.7
LIME1-208ENST00000493265 PTPAQ15257 358 aa19.41■□□□□ 0.7
LIME1-208ENST00000493265 MAP3K21Q5TCX8 1036 aa19.41■□□□□ 0.7
LIME1-208ENST00000493265 DHX37Q8IY37 1157 aaKnown RBP19.41■□□□□ 0.7
LIME1-208ENST00000493265 SLC5A5Q92911 643 aa19.41■□□□□ 0.7
LIME1-208ENST00000493265 LRCH3Q96II8 777 aa19.41■□□□□ 0.7
LIME1-208ENST00000493265 MLXIPQ9HAP2 919 aa19.41■□□□□ 0.7
LIME1-208ENST00000493265 GDPD2Q9HCC8 539 aa19.41■□□□□ 0.7
LIME1-208ENST00000493265 ZMYND8Q9ULU4 1186 aaPredicted RBP19.41■□□□□ 0.7
LIME1-208ENST00000493265 DOCK5Q9H7D0 1870 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 SEPT4O43236 478 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 DYNC1LI2O43237 492 aaPredicted RBP19.4■□□□□ 0.7
LIME1-208ENST00000493265 BMP15O95972 392 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 MYCNP04198 464 aaPredicted RBP19.4■□□□□ 0.7
LIME1-208ENST00000493265 TECP42680 631 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 NASPP49321 788 aaPredicted RBP19.4■□□□□ 0.7
LIME1-208ENST00000493265 ATP2C1P98194 919 aaPredicted RBP19.4■□□□□ 0.7
LIME1-208ENST00000493265 NEDD9Q14511 834 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 DUSP28Q4G0W2 176 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 ATL3Q6DD88 541 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 SLFN12Q8IYM2 578 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 ANKLE1Q8NAG6 615 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 OR6J1Q8NGC5 347 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 SPATA32Q96LK8 384 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 FAM20AQ96MK3 541 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 MTMR9Q96QG7 549 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 TEKT3Q9BXF9 490 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 TTC12Q9H892 705 aaPredicted RBP19.4■□□□□ 0.7
LIME1-208ENST00000493265 TCEAL9Q9UHQ7 104 aa19.4■□□□□ 0.7
LIME1-208ENST00000493265 LAMA3Q16787 3333 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 VWA3AA6NCI4 1184 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 TBX3O15119 743 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 SPTLC2O15270 562 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 GH1P01241 217 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 SLC39A14Q15043 492 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 CELF3Q5SZQ8 465 aaKnown RBP19.39■□□□□ 0.69
LIME1-208ENST00000493265 NCAPH2Q6IBW4 605 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 DTHD1Q6ZMT9 781 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 LINC00301Q8NCQ3 95 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 TBC1D22BQ9NU19 505 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 PCDHA12Q9UN75 941 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 TELO2Q9Y4R8 837 aa19.39■□□□□ 0.69
LIME1-208ENST00000493265 LAD1O00515 517 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 DHX15O43143 795 aaKnown RBP19.38■□□□□ 0.69
LIME1-208ENST00000493265 PSMD10O75832 226 aa19.38■□□□□ 0.69
LIME1-208ENST00000493265 YEATS4O95619 227 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms