RNA–Protein interactions for RNA: ENST00000492932.5

PDCD4-210, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 813 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-210ENST00000492932 TAP1Q03518 808 aa13.36□□□□□ -0.27
PDCD4-210ENST00000492932 CREB3L3Q68CJ9 461 aa13.36□□□□□ -0.27
PDCD4-210ENST00000492932 USP17L6PQ6QN14 398 aa13.36□□□□□ -0.27
PDCD4-210ENST00000492932 GPKOWQ92917 476 aaPredicted RBP eCLIP13.36□□□□□ -0.27
PDCD4-210ENST00000492932 CTAGE1Q96RT6 745 aa13.36□□□□□ -0.27
PDCD4-210ENST00000492932 C16orf70Q9BSU1 422 aa13.36□□□□□ -0.27
PDCD4-210ENST00000492932 LSG1Q9H089 658 aaKnown RBP13.36□□□□□ -0.27
PDCD4-210ENST00000492932 PSTPIP2Q9H939 334 aa13.36□□□□□ -0.27
PDCD4-210ENST00000492932 FRMPD4Q14CM0 1322 aa13.36□□□□□ -0.27
PDCD4-210ENST00000492932 TNFRSF10AO00220 468 aa13.35□□□□□ -0.27
PDCD4-210ENST00000492932 CAND2O75155 1236 aa13.35□□□□□ -0.27
PDCD4-210ENST00000492932 SMIM10L2AP0DMW4 78 aa13.35□□□□□ -0.27
PDCD4-210ENST00000492932 SMIM10L2BP0DMW5 78 aa13.35□□□□□ -0.27
PDCD4-210ENST00000492932 SP4Q02446 784 aa13.35□□□□□ -0.27
PDCD4-210ENST00000492932 UTP14CQ5TAP6 766 aaKnown RBP13.35□□□□□ -0.27
PDCD4-210ENST00000492932 SERINC5Q86VE9 423 aa13.35□□□□□ -0.27
PDCD4-210ENST00000492932 RAD9AQ99638 391 aa13.35□□□□□ -0.27
PDCD4-210ENST00000492932 SENP7Q9BQF6 1050 aa13.35□□□□□ -0.27
PDCD4-210ENST00000492932 MYH7BA7E2Y1 1941 aa13.35□□□□□ -0.27
PDCD4-210ENST00000492932 RFXAPO00287 272 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 GJB5O95377 273 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 PLEKHA8P1O95397 391 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 RXRAP19793 462 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 DEFB103AP81534 67 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 TRIM71Q2Q1W2 868 aaKnown RBP13.34□□□□□ -0.27
PDCD4-210ENST00000492932 HEATR3Q7Z4Q2 680 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 MICU3Q86XE3 530 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 CMTR1Q8N1G2 835 aaKnown RBP13.34□□□□□ -0.27
PDCD4-210ENST00000492932 CCDC82Q8N4S0 544 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 SRBD1Q8N5C6 995 aaKnown RBP13.34□□□□□ -0.27
PDCD4-210ENST00000492932 FANCBQ8NB91 859 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 ADAMTS19Q8TE59 1207 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 SEPT8Q92599 483 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 GPRASP2Q96D09 838 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 GPR20Q99678 358 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 RNPEPQ9H4A4 650 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 RBM28Q9NW13 759 aaKnown RBP13.34□□□□□ -0.27
PDCD4-210ENST00000492932 MTCH2Q9Y6C9 303 aa13.34□□□□□ -0.27
PDCD4-210ENST00000492932 UNC80Q8N2C7 3258 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 MEIS2O14770 477 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 MAFGO15525 162 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 POU3F3P20264 500 aaPredicted RBP13.33□□□□□ -0.28
PDCD4-210ENST00000492932 ARHGAP4P98171 946 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 MTMR1Q13613 665 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 GPNMBQ14956 572 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 NECTIN1Q15223 517 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 BMP2KLQ5H9B9 411 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 FAM117BQ6P1L5 589 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 CENPQQ7L2Z9 268 aaPredicted RBP13.33□□□□□ -0.28
PDCD4-210ENST00000492932 RSPH3Q86UC2 560 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 MYOCDQ8IZQ8 938 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 TNPO1Q92973 898 aaKnown RBP13.33□□□□□ -0.28
PDCD4-210ENST00000492932 NEK1Q96PY6 1258 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 TGS1Q96RS0 853 aaKnown RBP13.33□□□□□ -0.28
PDCD4-210ENST00000492932 SETD4Q9NVD3 440 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 COG5Q9UP83 839 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 INSL6Q9Y581 213 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 CDH23Q9H251 3354 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 NRCAMQ92823 1304 aa13.33□□□□□ -0.28
PDCD4-210ENST00000492932 TREHO43280 583 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 CTSHP09668 335 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 TCF7P36402 384 aaPredicted RBP13.32□□□□□ -0.28
PDCD4-210ENST00000492932 FGD1P98174 961 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 GRB10Q13322 594 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 KRT32Q14532 448 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 TMCO2Q7Z6W1 182 aaPredicted RBP13.32□□□□□ -0.28
PDCD4-210ENST00000492932 SGMS1Q86VZ5 419 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 RAB11FIP4Q86YS3 637 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 DBF4BQ8NFT6 615 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 APBB2Q92870 758 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 GLG1Q92896 1179 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 WNT8BQ93098 351 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 UHRF1Q96T88 793 aaPredicted RBP13.32□□□□□ -0.28
PDCD4-210ENST00000492932 LRRC2Q9BYS8 371 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 LMCD1Q9NZU5 365 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 MTUS1Q9ULD2 1270 aa13.32□□□□□ -0.28
PDCD4-210ENST00000492932 TRIP12Q14669 1992 aaPredicted RBP13.31□□□□□ -0.28
PDCD4-210ENST00000492932 LCHNA4D1U4 455 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 NAPAP54920 295 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 SEMA3FQ13275 785 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 HIC1Q14526 733 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 UBE2SQ16763 222 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 PLEKHG4Q58EX7 1191 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 TRAF7Q6Q0C0 670 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 TMTC3Q6ZXV5 915 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 TRIM50Q86XT4 487 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 SEPT1Q8WYJ6 367 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 HLA-CQ95604 372 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 BCAS3Q9H6U6 928 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 ERAP1Q9NZ08 941 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 NAP1L2Q9ULW6 460 aaPredicted RBP13.31□□□□□ -0.28
PDCD4-210ENST00000492932 PCDHA6Q9UN73 950 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 PCDHA8Q9Y5H6 950 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 EYSQ5T1H1 3165 aa13.31□□□□□ -0.28
PDCD4-210ENST00000492932 hCG_1642624A0A1W2PR95 340 aa13.3□□□□□ -0.28
PDCD4-210ENST00000492932 LINC01553A4QN01 128 aa13.3□□□□□ -0.28
PDCD4-210ENST00000492932 EPOPA6NHQ4 379 aa13.3□□□□□ -0.28
PDCD4-210ENST00000492932 hCG_1984214I3L0E3 225 aa13.3□□□□□ -0.28
PDCD4-210ENST00000492932 ZBTB43O43298 467 aa13.3□□□□□ -0.28
PDCD4-210ENST00000492932 HMGB1P09429 215 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms