RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 HERC2P3Q9BVR0 1158 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 PLVAPQ9BX97 442 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 MYLK2Q9H1R3 596 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 NCOR1P1Q9H4R4 102 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 DDX18Q9NVP1 670 aaKnown RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 MCM9Q9NXL9 1143 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 RCAN3Q9UKA8 241 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 TRAK1Q9UPV9 953 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 JAG2Q9Y219 1238 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 JRKLQ9Y4A0 524 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 GPR75-ASB3A0A0A6YYF3 556 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 CCDC69A6NI79 296 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 LRRC10BA6NIK2 292 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 CACNB4O00305 520 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 ZSCAN9O15535 394 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 GPR39O43194 453 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 PTCD1O75127 700 aaKnown RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 TBX18O95935 607 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 LPOP22079 712 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 MCM4P33991 863 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 RDXP35241 583 aaKnown RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 HNF4AP41235 474 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 ATP5OP48047 213 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 GSCP56915 257 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 RWDD2BP57060 319 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 UBXN1Q04323 297 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 IKQ13123 557 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 PDE3AQ14432 1141 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 NEDD9Q14511 834 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 PTPN21Q16825 1174 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 SLC5A9Q2M3M2 681 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 MAJINQ3KP22 176 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 C8orf34Q49A92 452 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 SLC27A3Q5K4L6 730 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 ZNF362Q5T0B9 420 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 METTL11BQ5VVY1 283 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 CEP135Q66GS9 1140 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 ANGPTL8Q6UXH0 198 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 LPCAT2Q7L5N7 544 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 ARMC9Q7Z3E5 817 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 SLFN12Q8IYM2 578 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 PHTF2Q8N3S3 785 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 FBXO30Q8TB52 745 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 RUFY2Q8WXA3 655 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 COL26A1Q96A83 441 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 SHDQ96IW2 340 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 NT5C1BQ96P26 610 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 PPP1R9BQ96SB3 815 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 ZPBPQ9BS86 351 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 MRPL46Q9H2W6 279 aaKnown RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 ZWILCHQ9H900 591 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 GRPEL1Q9HAV7 217 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 AGO4Q9HCK5 861 aaKnown RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 SIRT5Q9NXA8 310 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 SAP30BPQ9UHR5 308 aaKnown RBP4.7□□□□□ -1.66
BRCA1-220ENST00000492859 ADAMTS8Q9UP79 889 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 KIF3AQ9Y496 699 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 PCDHGB5Q9Y5G0 923 aa4.7□□□□□ -1.66
BRCA1-220ENST00000492859 SMARCA2P51531 1590 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 EVC2Q86UK5 1308 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 TNFRSF10AO00220 468 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 MAFKO60675 156 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 USO1O60763 962 aaKnown RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 USP1O94782 785 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 TBC1D8O95759 1140 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 EOMESO95936 686 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 APOA4P06727 396 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 ASGR2P07307 311 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 PF4V1P10720 104 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 TOP1P11387 765 aaKnown RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 TFEBP19484 476 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 EIF1AXP47813 144 aaKnown RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 CCNHP51946 323 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 ARFIP1P53367 373 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 ATXN1P54253 815 aaKnown RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 USP14P54578 494 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 NLRP5P59047 1200 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 TGFB2P61812 414 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 CD83Q01151 205 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 CDC16Q13042 620 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 NMIQ13287 307 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 LBRQ14739 615 aaKnown RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 STAT4Q14765 748 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 SUZ12Q15022 739 aaKnown RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 RCN1Q15293 331 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 KRT71Q3SY84 523 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 SYDE2Q5VT97 1194 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 RNF219Q5W0B1 726 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 SPRYD7Q5W111 196 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 GPR155Q7Z3F1 870 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 SULF1Q8IWU6 871 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 RPAP2Q8IXW5 612 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 TRIML2Q8N7C3 387 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 CNTD1Q8N815 330 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 PPM1NQ8N819 430 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 GBP7Q8N8V2 638 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-220ENST00000492859 ANKLE1Q8NAG6 615 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 GALNT6Q8NCL4 622 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 OR6C4Q8NGE1 309 aa4.69□□□□□ -1.66
BRCA1-220ENST00000492859 CCHCR1Q8TD31 782 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms