RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 DNAJC25Q9H1X3 360 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 MFSD1Q9H3U5 465 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 RUBCNLQ9H714 662 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 STARD7Q9NQZ5 370 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 CNTN3Q9P232 1028 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 DYRK1BQ9Y463 629 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 NBEAL1Q6ZS30 2694 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 TET1Q8NFU7 2136 aa5.26□□□□□ -1.57
UBR4-215ENST00000492606 LINC01553A4QN01 128 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 KIF28PB7ZC32 967 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 EFSO43281 561 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 F11P03951 625 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 GNA15P30679 374 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 FANCCQ00597 558 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 ATP2B2Q01814 1243 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 SPEM2Q0P670 501 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 HYAL1Q12794 435 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 TIGD5Q53EQ6 642 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 ARSJQ5FYB0 599 aaPredicted RBP5.25□□□□□ -1.57
UBR4-215ENST00000492606 SAMD5Q5TGI4 173 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 ALG1LQ6GMV1 187 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 PLEKHH3Q7Z736 793 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 CCDC84Q86UT8 332 aaPredicted RBP5.25□□□□□ -1.57
UBR4-215ENST00000492606 PROSER1Q86XN7 944 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 FAM126BQ8IXS8 530 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 PHOSPHO2Q8TCD6 241 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 FBF1Q8TES7 1133 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 HNRNPLLQ8WVV9 542 aaKnown RBP5.25□□□□□ -1.57
UBR4-215ENST00000492606 TGS1Q96RS0 853 aaKnown RBP5.25□□□□□ -1.57
UBR4-215ENST00000492606 C17orf80Q9BSJ5 609 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 ASCC2Q9H1I8 757 aaPredicted RBP5.25□□□□□ -1.57
UBR4-215ENST00000492606 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.25□□□□□ -1.57
UBR4-215ENST00000492606 AAASQ9NRG9 546 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 FAM13BQ9NYF5 915 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.25□□□□□ -1.57
UBR4-215ENST00000492606 TRMT112Q9UI30 125 aaKnown RBP5.25□□□□□ -1.57
UBR4-215ENST00000492606 AK5Q9Y6K8 562 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 ACACAQ13085 2346 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 ABCA2Q9BZC7 2435 aa5.25□□□□□ -1.57
UBR4-215ENST00000492606 APC2O95996 2303 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 SLC35F4A4IF30 521 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 IRS4O14654 1257 aaPredicted RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 ST8SIA5O15466 376 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 KINO60870 393 aaKnown RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 CPNE3O75131 537 aaKnown RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 KCNK5O95279 499 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 CD4P01730 458 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 TNNI2P48788 182 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 ACLYP53396 1101 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 TEFQ10587 303 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 PDE12Q6L8Q7 609 aaKnown RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 NLRP8Q86W28 1048 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 RPUSD2Q8IZ73 545 aaKnown RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 CMTR1Q8N1G2 835 aaKnown RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 EPS8L3Q8TE67 593 aaKnown RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 DDX1Q92499 740 aaKnown RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 CCDC74AQ96AQ1 378 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 CRELD1Q96HD1 420 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 SCNM1Q9BWG6 230 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 PHF7Q9BWX1 381 aaPredicted RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 NSUN3Q9H649 340 aaKnown RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 GPAMQ9HCL2 828 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 INCENPQ9NQS7 918 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 NDFIP2Q9NV92 336 aa5.24□□□□□ -1.57
UBR4-215ENST00000492606 CUEDC1Q9NWM3 386 aaPredicted RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 RRP7AQ9Y3A4 280 aaKnown RBP5.24□□□□□ -1.57
UBR4-215ENST00000492606 USP9YO00507 2555 aaPredicted RBP5.23□□□□□ -1.57
UBR4-215ENST00000492606 RALGAPA1Q6GYQ0 2036 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 TRIM75PA6NK02 468 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 RBAK-RBAKDNI3L0D1 243 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 SCAMP3O14828 347 aaKnown RBP5.23□□□□□ -1.57
UBR4-215ENST00000492606 AXIN1O15169 862 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 SORBS3O60504 671 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 RPLP1P05386 114 aaKnown RBP5.23□□□□□ -1.57
UBR4-215ENST00000492606 HOXC6P09630 235 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 PTPRAP18433 802 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 MAPK4P31152 587 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 TROAPQ12815 778 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 SFSWAPQ12872 951 aaKnown RBP5.23□□□□□ -1.57
UBR4-215ENST00000492606 DCAF15Q66K64 600 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 UBALD2Q8IYN6 164 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 DZIP1LQ8IYY4 767 aaKnown RBP5.23□□□□□ -1.57
UBR4-215ENST00000492606 C1orf127Q8N9H9 656 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 PUS7Q96PZ0 661 aaKnown RBP5.23□□□□□ -1.57
UBR4-215ENST00000492606 NOC4LQ9BVI4 516 aaKnown RBP5.23□□□□□ -1.57
UBR4-215ENST00000492606 GSX2Q9BZM3 304 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 HIPK3Q9H422 1215 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 BRD7Q9NPI1 651 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 ATP13A2Q9NQ11 1180 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 XPNPEP3Q9NQH7 507 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 CLEC1BQ9P126 229 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 RBPJLQ9UBG7 517 aa5.23□□□□□ -1.57
UBR4-215ENST00000492606 SMG5Q9UPR3 1016 aaKnown RBP5.23□□□□□ -1.57
UBR4-215ENST00000492606 USP15Q9Y4E8 981 aaPredicted RBP5.23□□□□□ -1.57
UBR4-215ENST00000492606 SPENQ96T58 3664 aaKnown RBP5.22□□□□□ -1.57
UBR4-215ENST00000492606 COL6A6A6NMZ7 2263 aa5.22□□□□□ -1.57
UBR4-215ENST00000492606 BTBD11A6QL63 1104 aa5.22□□□□□ -1.57
UBR4-215ENST00000492606 NRG2O14511 850 aaPredicted RBP5.22□□□□□ -1.57
UBR4-215ENST00000492606 EREGO14944 169 aa5.22□□□□□ -1.57
UBR4-215ENST00000492606 XYLBO75191 536 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms