RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 KDM3AQ9Y4C1 1321 aa17.82■□□□□ 0.44
SEMA4D-220ENST00000492386 SSBP05455 408 aaKnown RBP eCLIP17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 KLHDC7AQ5VTJ3 777 aa17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 RNF10Q8N5U6 811 aaKnown RBP17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 CRAMP1Q96RY5 1269 aa17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 KIAA1024Q9UPX6 916 aa17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 MARCH6O60337 910 aa17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 IVLP07476 585 aa17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 MARSP56192 900 aaKnown RBP17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 FOXR1Q6PIV2 292 aa17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 TRIM59Q8IWR1 403 aa17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 NOX5Q96PH1 765 aa17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 NUCKS1Q9H1E3 243 aaKnown RBP17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 BMP2KQ9NSY1 1161 aaPredicted RBP17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 SUGT1Q9Y2Z0 365 aa17.81■□□□□ 0.44
SEMA4D-220ENST00000492386 NPHP3-ACAD11A0A0J9YXS1 232 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 RIMBP2O15034 1052 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 SERPING1P05155 500 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 PLA2G4BP0C869 781 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 SLC9C1Q4G0N8 1177 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 TDRD12Q587J7 1177 aaKnown RBP17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 SFMBT2Q5VUG0 894 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 LRRC31Q6UY01 552 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 LSM14BQ9BX40 385 aaKnown RBP17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 KCTD10Q9H3F6 313 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 USP40Q9NVE5 1235 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 LCMT1Q9UIC8 334 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 A0A0U1RQG5 324 aaPredicted RBP17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 BUB1O43683 1085 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 MATR3P43243 847 aaKnown RBP eCLIP17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 MRPS25P82663 173 aaKnown RBP17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 APBA1Q02410 837 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 HAUS3Q68CZ6 603 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 NELFCDQ8IXH7 590 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 CCDC65Q8IXS2 484 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 GOLGA6L1Q8N7Z2 621 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 SCFD1Q8WVM8 642 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 UIMC1Q96RL1 719 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 COA1Q9GZY4 146 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 KCNMB3Q9NPA1 279 aa17.8■□□□□ 0.44
SEMA4D-220ENST00000492386 POTEB3A0JP26 581 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 POTECB2RU33 542 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 USP17L15C9J2P7 530 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 USP17L13C9JLJ4 530 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 USP17L11C9JVI0 530 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 USP17L18D6R9N7 530 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 USP17L22D6RA61 530 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 USP17L17D6RBQ6 530 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 USP17L19D6RCP7 530 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 USP17L20D6RJB6 530 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 GNA14O95837 355 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 POLR2FP61218 127 aaKnown RBP17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 SLC7A5Q01650 507 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 DDR1Q08345 913 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 USP17L24Q0WX57 530 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 CCDC181Q5TID7 509 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 USP17L6PQ6QN14 398 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 POTEBQ6S5H4 581 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 TMC4Q7Z404 712 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 GPBP1Q86WP2 473 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 ZC3H3Q8IXZ2 948 aaKnown RBP17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 NAP1L4Q99733 375 aaKnown RBP17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 USP21Q9UK80 565 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 ATP6V0A2Q9Y487 856 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 KLRG2A4D1S0 409 aaPredicted RBP17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 GOLGA6BA6NDN3 693 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 CYP11B2P19099 503 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 SND1Q7KZF4 910 aaKnown RBP eCLIP17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 MXD3Q9BW11 206 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 KANSL2Q9H9L4 492 aa17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.79■□□□□ 0.44
SEMA4D-220ENST00000492386 MPHOSPH10O00566 681 aaKnown RBP17.78■□□□□ 0.44
SEMA4D-220ENST00000492386 SLURP2P0DP57 97 aa17.78■□□□□ 0.44
SEMA4D-220ENST00000492386 SP8Q8IXZ3 490 aa17.78■□□□□ 0.44
SEMA4D-220ENST00000492386 RBM12Q9NTZ6 932 aaKnown RBP17.78■□□□□ 0.44
SEMA4D-220ENST00000492386 STIM2Q9P246 746 aa17.78■□□□□ 0.44
SEMA4D-220ENST00000492386 FRMD3A2A2Y4 597 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 PAFAH1B1P43034 410 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 QRICH1Q2TAL8 776 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 ARSHQ5FYA8 562 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 HERC4Q5GLZ8 1057 aaPredicted RBP17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 CDC42EP5Q6NZY7 148 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 SRLQ86TD4 932 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 MBOAT7Q96N66 472 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 EMILIN3Q9NT22 766 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 FEZ2Q9UHY8 353 aaPredicted RBP17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 TSKSQ9UJT2 592 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 CYP3A7-CYP3A51PA0A087WV96 503 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 PPEF1O14829 653 aaPredicted RBP17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 SLC26A4O43511 780 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 MED24O75448 989 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 CYP3A7P24462 503 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 SCNN1DP51172 638 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 USP11P51784 963 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 NAB2Q15742 525 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 MS4A14Q96JA4 679 aa17.77■□□□□ 0.44
SEMA4D-220ENST00000492386 SIPA1L1O43166 1804 aa17.77■□□□□ 0.43
SEMA4D-220ENST00000492386 MYO1CO00159 1063 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms