RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 INF2Q27J81 1249 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 TKFCQ3LXA3 575 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 MBLAC2Q68D91 279 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 KCNT2Q6UVM3 1135 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 KIAA0907Q7Z7F0 614 aaPredicted RBP5.65□□□□□ -1.5
VTA1-204ENST00000491881 B3GNT8Q7Z7M8 397 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 MTDHQ86UE4 582 aaKnown RBP5.65□□□□□ -1.5
VTA1-204ENST00000491881 FAM177A1Q8N128 213 aaPredicted RBP5.65□□□□□ -1.5
VTA1-204ENST00000491881 CHAMP1Q96JM3 812 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 ZFYVE21Q9BQ24 234 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 PLAAQ9Y263 795 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 TRAF6Q9Y4K3 522 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 PCDHA2Q9Y5H9 948 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 TIMM13Q9Y5L4 95 aaPredicted RBP5.65□□□□□ -1.5
VTA1-204ENST00000491881 NPFFR2Q9Y5X5 522 aa5.65□□□□□ -1.5
VTA1-204ENST00000491881 LCP1P13796 627 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 NAT1P18440 290 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 GTF2A2P52657 109 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 GPR85P60893 370 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 PABPC4Q13310 644 aaKnown RBP eCLIP5.64□□□□□ -1.51
VTA1-204ENST00000491881 FNDC3BQ53EP0 1204 aaKnown RBP5.64□□□□□ -1.51
VTA1-204ENST00000491881 TRIM61Q5EBN2 209 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 EGFLAMQ63HQ2 1017 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 CPZQ66K79 652 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 IFNL3Q8IZI9 196 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 RCBTB1Q8NDN9 531 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.64□□□□□ -1.51
VTA1-204ENST00000491881 USP33Q8TEY7 942 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 LOXL4Q96JB6 756 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 ALG1Q9BT22 464 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 SLC52A2Q9HAB3 445 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 NTMQ9P121 344 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 GULP1Q9UBP9 304 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 CADPSQ9ULU8 1353 aa5.64□□□□□ -1.51
VTA1-204ENST00000491881 FSHBP01225 129 aa5.63□□□□□ -1.51
VTA1-204ENST00000491881 SARSP49591 514 aaKnown RBP5.63□□□□□ -1.51
VTA1-204ENST00000491881 GUCY1A3Q02108 690 aa5.63□□□□□ -1.51
VTA1-204ENST00000491881 C21orf62-AS1Q17RA5 79 aa5.63□□□□□ -1.51
VTA1-204ENST00000491881 KIZQ2M2Z5 673 aa5.63□□□□□ -1.51
VTA1-204ENST00000491881 BRAPQ7Z569 592 aa5.63□□□□□ -1.51
VTA1-204ENST00000491881 LZTR1Q8N653 840 aa5.63□□□□□ -1.51
VTA1-204ENST00000491881 SLC16A11Q8NCK7 471 aa5.63□□□□□ -1.51
VTA1-204ENST00000491881 MAGEB10Q96LZ2 347 aaPredicted RBP5.63□□□□□ -1.51
VTA1-204ENST00000491881 RBM15Q96T37 977 aaKnown RBP eCLIP5.63□□□□□ -1.51
VTA1-204ENST00000491881 MARCH2Q9P0N8 246 aa5.63□□□□□ -1.51
VTA1-204ENST00000491881 RWDD3Q9Y3V2 267 aa5.63□□□□□ -1.51
VTA1-204ENST00000491881 ARNTLO00327 626 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 RFPL3O75679 317 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 PMLP29590 882 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 GYS2P54840 703 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 LSAMPQ13449 338 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 LBX2Q6XYB7 198 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 TTLL7Q6ZT98 887 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 CABP7Q86V35 215 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 NIM1KQ8IY84 436 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 GSTCDQ8NEC7 633 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 NLGN2Q8NFZ4 835 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 SMARCC2Q8TAQ2 1214 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 SLC7A14Q8TBB6 771 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 NINJ1Q92982 152 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 TMEM169Q96HH4 297 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 C8orf49Q96NF6 230 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 BCAS3Q9H6U6 928 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 RXFP1Q9HBX9 757 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 CLDND1Q9NY35 253 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.62□□□□□ -1.51
VTA1-204ENST00000491881 ASXL2Q76L83 1435 aa5.62□□□□□ -1.51
VTA1-204ENST00000491881 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.61□□□□□ -1.51
VTA1-204ENST00000491881 KCNQ2O43526 872 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 MSCO60682 206 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 CRTAMO95727 393 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 FUCA1P04066 466 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 GLI4P10075 376 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 GRK2P25098 689 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 GRK3P35626 688 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 BCL6P41182 706 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 DALRD3Q5D0E6 543 aaKnown RBP5.61□□□□□ -1.51
VTA1-204ENST00000491881 CEP68Q76N32 757 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 ZNF761Q86XN6 746 aaPredicted RBP5.61□□□□□ -1.51
VTA1-204ENST00000491881 TEX2Q8IWB9 1127 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 ZC3H7AQ8IWR0 971 aaKnown RBP5.61□□□□□ -1.51
VTA1-204ENST00000491881 DHX37Q8IY37 1157 aaKnown RBP5.61□□□□□ -1.51
VTA1-204ENST00000491881 MFSD3Q96ES6 412 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 TRMT2BQ96GJ1 504 aaKnown RBP5.61□□□□□ -1.51
VTA1-204ENST00000491881 CLUHP3Q96NS8 147 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 SAMD11Q96NU1 681 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 NOX5Q96PH1 765 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 TRIM39Q9HCM9 518 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.61□□□□□ -1.512e-7■■■■□ 23.5
VTA1-204ENST00000491881 COA3Q9Y2R0 106 aaPredicted RBP5.61□□□□□ -1.51
VTA1-204ENST00000491881 PCDHA9Q9Y5H5 950 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 PCDHA8Q9Y5H6 950 aa5.61□□□□□ -1.51
VTA1-204ENST00000491881 C22orf46C9J442 243 aa5.6□□□□□ -1.51
VTA1-204ENST00000491881 C1QTNF3-AMACRE9PGA6 284 aa5.6□□□□□ -1.51
VTA1-204ENST00000491881 OPA1O60313 960 aa5.6□□□□□ -1.51
VTA1-204ENST00000491881 RASGRP1O95267 797 aa5.6□□□□□ -1.51
VTA1-204ENST00000491881 ZNF20P17024 532 aa5.6□□□□□ -1.51
VTA1-204ENST00000491881 PAK1Q13153 545 aa5.6□□□□□ -1.51
VTA1-204ENST00000491881 RNF187Q5TA31 235 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms