RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 RABGGTBP53611 331 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 AKAP17AQ02040 695 aaKnown RBP17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 ARHGEF16Q5VV41 709 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 HEATR3Q7Z4Q2 680 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 DEFB128Q7Z7B8 93 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 FAM177A1Q8N128 213 aaPredicted RBP17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 GAS2L1Q99501 681 aaPredicted RBP17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 PDCD2LQ9BRP1 358 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 LLPHQ9BRT6 129 aaKnown RBP17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 SLC26A6Q9BXS9 759 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 SLC28A3Q9HAS3 691 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 XIRP2A4UGR9 3374 aa17.22■□□□□ 0.35
CDC42SE1-205ENST00000491825 ZBBXA8MT70 800 aa17.21■□□□□ 0.35
CDC42SE1-205ENST00000491825 STXBP3O00186 592 aa17.21■□□□□ 0.35
CDC42SE1-205ENST00000491825 PIK3CDO00329 1044 aa17.21■□□□□ 0.35
CDC42SE1-205ENST00000491825 EIF3JO75822 258 aaKnown RBP17.21■□□□□ 0.35
CDC42SE1-205ENST00000491825 HOXD8P13378 290 aaPredicted RBP17.21■□□□□ 0.35
CDC42SE1-205ENST00000491825 MYOGP15173 224 aa17.21■□□□□ 0.35
CDC42SE1-205ENST00000491825 ATP2A2P16615 1042 aaKnown RBP17.21■□□□□ 0.35
CDC42SE1-205ENST00000491825 SSRP1Q08945 709 aaKnown RBP17.21■□□□□ 0.35
CDC42SE1-205ENST00000491825 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
CDC42SE1-205ENST00000491825 GPKOWQ92917 476 aaPredicted RBP eCLIP17.21■□□□□ 0.355e-8■■□□□ 14
CDC42SE1-205ENST00000491825 PRDM6Q9NQX0 595 aa17.21■□□□□ 0.35
CDC42SE1-205ENST00000491825 PCDHA11Q9Y5I1 949 aa17.21■□□□□ 0.35
CDC42SE1-205ENST00000491825 TTC28Q96AY4 2481 aa17.21■□□□□ 0.34
CDC42SE1-205ENST00000491825 TANC1Q9C0D5 1861 aa17.2■□□□□ 0.34
CDC42SE1-205ENST00000491825 ESYT2A0FGR8 921 aa17.2■□□□□ 0.34
CDC42SE1-205ENST00000491825 RBL2Q08999 1139 aa17.2■□□□□ 0.34
CDC42SE1-205ENST00000491825 GPNMBQ14956 572 aa17.2■□□□□ 0.34
CDC42SE1-205ENST00000491825 PTGISQ16647 500 aa17.2■□□□□ 0.34
CDC42SE1-205ENST00000491825 GDF6Q6KF10 455 aaPredicted RBP17.2■□□□□ 0.34
CDC42SE1-205ENST00000491825 TYW1BQ6NUM6 668 aa17.2■□□□□ 0.34
CDC42SE1-205ENST00000491825 IL31RAQ8NI17 732 aa17.2■□□□□ 0.34
CDC42SE1-205ENST00000491825 CCDC12Q8WUD4 166 aaPredicted RBP17.2■□□□□ 0.34
CDC42SE1-205ENST00000491825 DHX38Q92620 1227 aaKnown RBP17.2■□□□□ 0.34
CDC42SE1-205ENST00000491825 TMX3Q96JJ7 454 aa17.2■□□□□ 0.34
CDC42SE1-205ENST00000491825 F2P00734 622 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 HOXA13P31271 388 aaPredicted RBP17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 BFSP2Q13515 415 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 DGKDQ16760 1214 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 PPP2R2DQ66LE6 453 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 CCDC83Q8IWF9 413 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 CCDC148Q8NFR7 591 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 PPTC7Q8NI37 304 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 SMARCC2Q8TAQ2 1214 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 CAGE1Q8TC20 777 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 SNX21Q969T3 373 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 GLT8D2Q9H1C3 349 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 SH3GLB2Q9NR46 395 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 GTF2IRD1Q9UHL9 959 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 MRVI1Q9Y6F6 885 aa17.19■□□□□ 0.34
CDC42SE1-205ENST00000491825 GCOM1H8Y6P7 765 aaPredicted RBP17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 HAS3O00219 553 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 POLR2MP0CAP2 368 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 NAPAP54920 295 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 LAMC2Q13753 1193 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 PGM5Q15124 567 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 VSIG10LQ86VR7 867 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 RETREG2Q8NC44 543 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 AFAP1L1Q8TED9 768 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 WASF1Q92558 559 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 PSTPIP2Q9H939 334 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 NOD1Q9Y239 953 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 FRMPD4Q14CM0 1322 aa17.18■□□□□ 0.34
CDC42SE1-205ENST00000491825 PPFIA3O75145 1194 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 ZNF286BP0CG31 522 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 ACTN1P12814 892 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 CHMP4BP1P59074 171 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 TJAP1Q5JTD0 557 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 MYSM1Q5VVJ2 828 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 PHOSPHO2Q8TCD6 241 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 CUL5Q93034 780 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 SLC9A7Q96T83 725 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 ZMYND12Q9H0C1 365 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 RIC8AQ9NPQ8 531 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 HDAC6Q9UBN7 1215 aa17.17■□□□□ 0.34
CDC42SE1-205ENST00000491825 SCN5AQ14524 2016 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 GBF1Q92538 1859 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 MEIS2O14770 477 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 JAK2O60674 1132 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 BAIAP3O94812 1187 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 ARHGEF15O94989 841 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 CA3P07451 260 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 MYCLP12524 364 aaPredicted RBP17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 FDPSP14324 419 aaKnown RBP17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 SELPP16109 830 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 UBA1P22314 1058 aaKnown RBP17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 PSEN2P49810 448 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 ADCY7P51828 1080 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 HMGN5P82970 282 aaKnown RBP17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 SP2Q02086 613 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 HSDL1Q3SXM5 330 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 CELF3Q5SZQ8 465 aaKnown RBP17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 TRAF7Q6Q0C0 670 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 DHX37Q8IY37 1157 aaKnown RBP17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 CCDC155Q8N6L0 562 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 KATNAL1Q9BW62 490 aa17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 ORC3Q9UBD5 711 aaPredicted RBP17.16■□□□□ 0.34
CDC42SE1-205ENST00000491825 KIAA1217Q5T5P2 1943 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms