RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 hCG_1984214I3L0E3 225 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 CCND2P30279 289 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 ADCY7P51828 1080 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 SSRP1Q08945 709 aaKnown RBP10.67□□□□□ -0.7
BRCA1-219ENST00000491747 TTLL4Q14679 1199 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 ANKRD1Q15327 319 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 FSCN1Q16658 493 aaKnown RBP10.67□□□□□ -0.7
BRCA1-219ENST00000491747 LARP1BQ659C4 914 aaKnown RBP10.67□□□□□ -0.7
BRCA1-219ENST00000491747 C7orf61Q8IZ16 206 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 ZNF710Q8N1W2 664 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 ZNF713Q8N859 430 aaPredicted RBP10.67□□□□□ -0.7
BRCA1-219ENST00000491747 AP5M1Q9H0R1 490 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 VPS54Q9P1Q0 977 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 PRDM4Q9UKN5 801 aa10.67□□□□□ -0.7
BRCA1-219ENST00000491747 H0YGN5 161 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 EVI5O60447 810 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 SEMA3FQ13275 785 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 PCNX4Q63HM2 1172 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 OR6J1Q8NGC5 347 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 ZMYND12Q9H0C1 365 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 SPC25Q9HBM1 224 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 GOLGA6L4A6NEF3 574 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 MOXD2PA6NHM9 499 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 CPLX1O14810 134 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 SORBS3O60504 671 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 RTP1P59025 263 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 ARHGAP1Q07960 439 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 SNX17Q15036 470 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 CXCL17Q6UXB2 119 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 PCSK9Q8NBP7 692 aaKnown RBP10.66□□□□□ -0.7
BRCA1-219ENST00000491747 SCAND2PQ9GZW5 306 aaPredicted RBP10.66□□□□□ -0.7
BRCA1-219ENST00000491747 KCNF1Q9H3M0 494 aa10.66□□□□□ -0.7
BRCA1-219ENST00000491747 NKRFO15226 690 aaKnown RBP eCLIP10.65□□□□□ -0.7
BRCA1-219ENST00000491747 AKAP17AQ02040 695 aaKnown RBP10.65□□□□□ -0.7
BRCA1-219ENST00000491747 TRIM60Q495X7 471 aa10.65□□□□□ -0.7
BRCA1-219ENST00000491747 JAKMIP3Q5VZ66 844 aa10.65□□□□□ -0.7
BRCA1-219ENST00000491747 SPC24Q8NBT2 197 aa10.65□□□□□ -0.7
BRCA1-219ENST00000491747 GTF3C6Q969F1 213 aa10.65□□□□□ -0.7
BRCA1-219ENST00000491747 INPP4AQ96PE3 977 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-219ENST00000491747 MRVI1Q9Y6F6 885 aa10.65□□□□□ -0.7
BRCA1-219ENST00000491747 LTBP2Q14767 1821 aa10.65□□□□□ -0.7
BRCA1-219ENST00000491747 GRIN2DO15399 1336 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 ESYT2A0FGR8 921 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 SPDYE3A6NKU9 549 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 AP5Z1O43299 807 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 DEXIO95424 95 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 FDPSP14324 419 aaKnown RBP10.65□□□□□ -0.71
BRCA1-219ENST00000491747 SYN1P17600 705 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 TYRO3Q06418 890 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 RASGRP4Q8TDF6 673 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 ANO3Q9BYT9 981 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 TNMDQ9H2S6 317 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 STARD7Q9NQZ5 370 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 GJB4Q9NTQ9 266 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 ZMYND8Q9ULU4 1186 aaPredicted RBP10.65□□□□□ -0.71
BRCA1-219ENST00000491747 PYCARDQ9ULZ3 195 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 ATP11BQ9Y2G3 1177 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 TELO2Q9Y4R8 837 aa10.65□□□□□ -0.71
BRCA1-219ENST00000491747 A6NJR5 290 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 SPATA31C2B4DYI2 1134 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 GH1P01241 217 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 ITGB5P18084 799 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 UBA1P22314 1058 aaKnown RBP10.64□□□□□ -0.71
BRCA1-219ENST00000491747 ICAM3P32942 547 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 PSMC6P62333 389 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 NPY5RQ15761 445 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 UTP14CQ5TAP6 766 aaKnown RBP10.64□□□□□ -0.71
BRCA1-219ENST00000491747 C1orf53Q5VUE5 145 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 TRIM22Q8IYM9 498 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 CYP2W1Q8TAV3 490 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 PPP1R13LQ8WUF5 828 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 AFG1LQ8WV93 481 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 TSC1Q92574 1164 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 DDX19AQ9NUU7 478 aaKnown RBP10.64□□□□□ -0.71
BRCA1-219ENST00000491747 UBIAD1Q9Y5Z9 338 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 SCN10AQ9Y5Y9 1956 aa10.64□□□□□ -0.71
BRCA1-219ENST00000491747 EDIL3O43854 480 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 MYL3P08590 195 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 CDK7P50613 346 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 PURAQ00577 322 aaKnown RBP10.63□□□□□ -0.71
BRCA1-219ENST00000491747 PRPF38BQ5VTL8 546 aaKnown RBP10.63□□□□□ -0.71
BRCA1-219ENST00000491747 MYSM1Q5VVJ2 828 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 PDCL2Q8N4E4 241 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 NSUN7Q8NE18 718 aaKnown RBP10.63□□□□□ -0.71
BRCA1-219ENST00000491747 GLT1D1Q96MS3 346 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 C6orf50Q9HD87 102 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 SH3GLB2Q9NR46 395 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 RIOK3O14730 519 aaKnown RBP10.63□□□□□ -0.71
BRCA1-219ENST00000491747 JAK2O60674 1132 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 ATP9AO75110 1047 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 STAM2O75886 525 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 GGPS1O95749 300 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 MMP3P08254 477 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 CPT1AP50416 773 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 TLE2Q04725 743 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 HSDL1Q3SXM5 330 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 CELF3Q5SZQ8 465 aaKnown RBP10.63□□□□□ -0.71
BRCA1-219ENST00000491747 XRRA1Q6P2D8 792 aa10.63□□□□□ -0.71
BRCA1-219ENST00000491747 CPLX2Q6PUV4 134 aaKnown RBP10.63□□□□□ -0.71
BRCA1-219ENST00000491747 SH3RF1Q7Z6J0 888 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms