RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 FGBP02675 491 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 FDPSP14324 419 aaKnown RBP15.6■□□□□ 0.09
CDK9-204ENST00000491521 DNAJB2P25686 324 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 GHRHRQ02643 423 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 TRIM29Q14134 588 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 DGKDQ16760 1214 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 LARP1BQ659C4 914 aaKnown RBP15.6■□□□□ 0.09
CDK9-204ENST00000491521 NFRKBQ6P4R8 1299 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 VSIG10LQ86VR7 867 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 MYLIPQ8WY64 445 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 CUL5Q93034 780 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 CDX2Q99626 313 aaPredicted RBP15.6■□□□□ 0.09
CDK9-204ENST00000491521 ALG1Q9BT22 464 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 MAP3K20Q9NYL2 800 aaKnown RBP15.6■□□□□ 0.09
CDK9-204ENST00000491521 CXXC1Q9P0U4 656 aaPredicted RBP15.6■□□□□ 0.09
CDK9-204ENST00000491521 STK36Q9NRP7 1315 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 CHD9Q3L8U1 2897 aa15.6■□□□□ 0.09
CDK9-204ENST00000491521 ZBBXA8MT70 800 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 H3BQV1 296 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 GGPS1O95749 300 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 SCG2P13521 617 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 PDCP20941 246 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 PBX2P40425 430 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 LAMC2Q13753 1193 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 PTGISQ16647 500 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 USP17L6PQ6QN14 398 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 HEATR3Q7Z4Q2 680 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 SPATA33Q96N06 139 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 RTEL1Q9NZ71 1219 aa15.59■□□□□ 0.09
CDK9-204ENST00000491521 TRIP12Q14669 1992 aaPredicted RBP15.58■□□□□ 0.09
CDK9-204ENST00000491521 XBP1P17861 261 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 UBA1P22314 1058 aaKnown RBP15.58■□□□□ 0.08
CDK9-204ENST00000491521 PSEN2P49810 448 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 SP2Q02086 613 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 PFKFB3Q16875 520 aaPredicted RBP15.58■□□□□ 0.08
CDK9-204ENST00000491521 GDF6Q6KF10 455 aaPredicted RBP15.58■□□□□ 0.08
CDK9-204ENST00000491521 RPUSD2Q8IZ73 545 aaKnown RBP15.58■□□□□ 0.08
CDK9-204ENST00000491521 SAMD3Q8N6K7 520 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 RETREG2Q8NC44 543 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 PPTC7Q8NI37 304 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 KAT2BQ92831 832 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 TIFAQ96CG3 184 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 C8orf76Q96K31 380 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 AIFM3Q96NN9 605 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 MTIF3Q9H2K0 278 aaKnown RBP15.58■□□□□ 0.08
CDK9-204ENST00000491521 DOCK5Q9H7D0 1870 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 MYO9BQ13459 2157 aa15.58■□□□□ 0.08
CDK9-204ENST00000491521 GBF1Q92538 1859 aa15.57■□□□□ 0.08
CDK9-204ENST00000491521 GUCY1B3Q02153 619 aa15.57■□□□□ 0.08
CDK9-204ENST00000491521 PTPN11Q06124 597 aaPredicted RBP15.57■□□□□ 0.08
CDK9-204ENST00000491521 MFSD10Q14728 455 aa15.57■□□□□ 0.08
CDK9-204ENST00000491521 PKN1Q16512 942 aa15.57■□□□□ 0.08
CDK9-204ENST00000491521 CELF3Q5SZQ8 465 aaKnown RBP15.57■□□□□ 0.08
CDK9-204ENST00000491521 C7orf31Q8N865 590 aa15.57■□□□□ 0.08
CDK9-204ENST00000491521 HERVK_113Q902F9 699 aa15.57■□□□□ 0.08
CDK9-204ENST00000491521 EMID1Q96A84 441 aaPredicted RBP15.57■□□□□ 0.08
CDK9-204ENST00000491521 PBX4Q9BYU1 374 aa15.57■□□□□ 0.08
CDK9-204ENST00000491521 FTOQ9C0B1 505 aaKnown RBP eCLIP15.57■□□□□ 0.08
CDK9-204ENST00000491521 BCAS3Q9H6U6 928 aa15.57■□□□□ 0.08
CDK9-204ENST00000491521 MLXIPQ9HAP2 919 aa15.57■□□□□ 0.08
CDK9-204ENST00000491521 VPS37CA5D8V6 355 aaPredicted RBP15.56■□□□□ 0.08
CDK9-204ENST00000491521 RBAK-RBAKDNI3L0D1 243 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 SYT1P21579 422 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 NLRP5P59047 1200 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 MRPS9P82933 396 aaKnown RBP15.56■□□□□ 0.08
CDK9-204ENST00000491521 SP4Q02446 784 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 UBE2SQ16763 222 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 KIAA0753Q2KHM9 967 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 HSDL1Q3SXM5 330 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 GNPTABQ3T906 1256 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 RASIP1Q5U651 963 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 MYSM1Q5VVJ2 828 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 KCNV1Q6PIU1 500 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 PSTPIP2Q9H939 334 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 VPS54Q9P1Q0 977 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 HDAC6Q9UBN7 1215 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 MSRAQ9UJ68 235 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 SLC4A7Q9Y6M7 1214 aa15.56■□□□□ 0.08
CDK9-204ENST00000491521 CHD7Q9P2D1 2997 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 TANC1Q9C0D5 1861 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 NOP56O00567 594 aaKnown RBP15.55■□□□□ 0.08
CDK9-204ENST00000491521 MEIS2O14770 477 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 FOSL2P15408 326 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 RABGGTBP53611 331 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 NAPAP54920 295 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 BFSP2Q13515 415 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 GRIN2CQ14957 1233 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 WWC2Q6AWC2 1192 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 CYFIP1Q7L576 1253 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 CCDC155Q8N6L0 562 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 KATNAL1Q9BW62 490 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 NKX2-4Q9H2Z4 354 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 ZNF576Q9H609 170 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 GJB4Q9NTQ9 266 aa15.55■□□□□ 0.08
CDK9-204ENST00000491521 FRMPD4Q14CM0 1322 aa15.54■□□□□ 0.08
CDK9-204ENST00000491521 hCG_1984214I3L0E3 225 aa15.54■□□□□ 0.08
CDK9-204ENST00000491521 STX6O43752 255 aa15.54■□□□□ 0.08
CDK9-204ENST00000491521 F2P00734 622 aa15.54■□□□□ 0.08
CDK9-204ENST00000491521 IQCF3P0C7M6 154 aa15.54■□□□□ 0.08
CDK9-204ENST00000491521 PDIA4P13667 645 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms