RNA–Protein interactions for RNA: ENST00000491421.5

LSM2-213, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-213ENST00000491421 GOLGA8BA8MQT2 603 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 H3BRB1 525 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 PARNO95453 639 aaKnown RBP9.49□□□□□ -0.89
LSM2-213ENST00000491421 LGALS2P05162 132 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 CKBP12277 381 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 FGD1P98174 961 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 ZNF200P98182 395 aaPredicted RBP9.49□□□□□ -0.89
LSM2-213ENST00000491421 SP4Q02446 784 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 RTN1Q16799 776 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 PPP2R2DQ66LE6 453 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 WWC2Q6AWC2 1192 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 SLC9A7Q96T83 725 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 GPR20Q99678 358 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 USP26Q9BXU7 913 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 TUT1Q9H6E5 874 aaKnown RBP9.49□□□□□ -0.89
LSM2-213ENST00000491421 BRPF3Q9ULD4 1205 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 NAP1L2Q9ULW6 460 aaPredicted RBP9.49□□□□□ -0.89
LSM2-213ENST00000491421 CNTNAP5Q8WYK1 1306 aa9.49□□□□□ -0.89
LSM2-213ENST00000491421 BAIAP3O94812 1187 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 SMIM10L2AP0DMW4 78 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 SMIM10L2BP0DMW5 78 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 MYOGP15173 224 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 KCNJ6P48051 423 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 NAPAP54920 295 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 HIC1Q14526 733 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 TRIM71Q2Q1W2 868 aaKnown RBP9.48□□□□□ -0.89
LSM2-213ENST00000491421 ZNF618Q5T7W0 954 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 UTP14CQ5TAP6 766 aaKnown RBP9.48□□□□□ -0.89
LSM2-213ENST00000491421 PPP1R18Q6NYC8 613 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 SERINC5Q86VE9 423 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 TRIM50Q86XT4 487 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 GIMAP8Q8ND71 665 aaPredicted RBP9.48□□□□□ -0.89
LSM2-213ENST00000491421 PHOSPHO2Q8TCD6 241 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 ATP6V0A1Q93050 837 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 WNT8BQ93098 351 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 GPRASP2Q96D09 838 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 CDHR1Q96JP9 859 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 JAKMIP1Q96N16 626 aaKnown RBP9.48□□□□□ -0.89
LSM2-213ENST00000491421 SENP7Q9BQF6 1050 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 EHMT1Q9H9B1 1298 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 ZNF215Q9UL58 517 aaPredicted RBP9.48□□□□□ -0.89
LSM2-213ENST00000491421 PCDHA6Q9UN73 950 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 PCDHA8Q9Y5H6 950 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 MYH6P13533 1939 aa9.48□□□□□ -0.89
LSM2-213ENST00000491421 PRUNE2Q8WUY3 3088 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 KIF28PB7ZC32 967 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 hCG_1984214I3L0E3 225 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 NBNO60934 754 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 CXCL10P02778 98 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 NEFLP07196 543 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 CA3P07451 260 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 CPA1P15085 419 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 ITGB5P18084 799 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 HSPA4P34932 840 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 THPOP40225 353 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 ADCY7P51828 1080 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 RCAN1P53805 252 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 FUT2Q10981 343 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 MTMR1Q13613 665 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 GPNMBQ14956 572 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 CNKSR3Q6P9H4 555 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 HERC6Q8IVU3 1022 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 ZNF713Q8N859 430 aaPredicted RBP9.47□□□□□ -0.89
LSM2-213ENST00000491421 RIC8AQ9NPQ8 531 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 PKD2L1Q9P0L9 805 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 SNX14Q9Y5W7 946 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 UBIAD1Q9Y5Z9 338 aa9.47□□□□□ -0.89
LSM2-213ENST00000491421 V9GY48 417 aaPredicted RBP9.47□□□□□ -0.89
LSM2-213ENST00000491421 BAZ2BQ9UIF8 2168 aaKnown RBP9.47□□□□□ -0.89
LSM2-213ENST00000491421 KIAA1217Q5T5P2 1943 aa9.46□□□□□ -0.89
LSM2-213ENST00000491421 CHD7Q9P2D1 2997 aa9.46□□□□□ -0.89
LSM2-213ENST00000491421 RSPH10B2B2RC85 870 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 STXBP3O00186 592 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 TREHO43280 583 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 ATP9AO75110 1047 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 REC8O95072 547 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 RSPH10BP0C881 870 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 GNAT1P11488 350 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 KCNA2P16389 499 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 IGFBP4P22692 258 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 CDC27P30260 824 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 HOXC8P31273 242 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 TCF7P36402 384 aaPredicted RBP9.46□□□□□ -0.9
LSM2-213ENST00000491421 METAP2P50579 478 aaKnown RBP eCLIP9.46□□□□□ -0.9
LSM2-213ENST00000491421 WDR5P61964 334 aaKnown RBP9.46□□□□□ -0.9
LSM2-213ENST00000491421 APOBRQ0VD83 1088 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 IKBKEQ14164 716 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 ADGRE1Q14246 886 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 MBTPS1Q14703 1052 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 TYW1BQ6NUM6 668 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 TRAF7Q6Q0C0 670 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 BLOC1S2Q6QNY1 142 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 Q6ZUG5 572 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 TEX2Q8IWB9 1127 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 USP38Q8NB14 1042 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 PPM1EQ8WY54 764 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 KCNB2Q92953 911 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 BRF1Q92994 677 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 RNPEPQ9H4A4 650 aa9.46□□□□□ -0.9
LSM2-213ENST00000491421 JADE2Q9NQC1 790 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms