RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 SPRED2Q7Z698 418 aa18.12■□□□□ 0.49
SMPD4-220ENST00000491319 SYMPKQ92797 1274 aaKnown RBP18.12■□□□□ 0.49
SMPD4-220ENST00000491319 CUL5Q93034 780 aa18.12■□□□□ 0.49
SMPD4-220ENST00000491319 ANO2Q9NQ90 1003 aa18.12■□□□□ 0.49
SMPD4-220ENST00000491319 TELO2Q9Y4R8 837 aa18.12■□□□□ 0.49
SMPD4-220ENST00000491319 LOXHD1Q8IVV2 1947 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 LCHNA4D1U4 455 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 SPATA31C2B4DYI2 1134 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 KIF28PB7ZC32 967 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 H3BRB1 525 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 PIK3CDO00329 1044 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 NOP56O00567 594 aaKnown RBP18.11■□□□□ 0.49
SMPD4-220ENST00000491319 FIBPO43427 364 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 TLL1O43897 1013 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 SMARCA1P28370 1054 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 PCNX4Q63HM2 1172 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 METTL7BQ6UX53 244 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 CYFIP1Q7L576 1253 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 SERINC5Q86VE9 423 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 LZTS2Q9BRK4 669 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 TUT1Q9H6E5 874 aaKnown RBP18.11■□□□□ 0.49
SMPD4-220ENST00000491319 NCOR1O75376 2440 aa18.11■□□□□ 0.49
SMPD4-220ENST00000491319 MUC3AQ02505 3323 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 hCG_1642624A0A1W2PR95 340 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 SMIM10L2AP0DMW4 78 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 SMIM10L2BP0DMW5 78 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 HOXC8P31273 242 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 LIFRP42702 1097 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 GNAQP50148 359 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 NEDD9Q14511 834 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 TRIM50Q86XT4 487 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 TMTC2Q8N394 836 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 ATXN2LQ8WWM7 1075 aaKnown RBP18.1■□□□□ 0.49
SMPD4-220ENST00000491319 ARNTL2Q8WYA1 636 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 ATP6V0A1Q93050 837 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 GPR20Q99678 358 aa18.1■□□□□ 0.49
SMPD4-220ENST00000491319 BRWD1Q9NSI6 2320 aa18.09■□□□□ 0.49
SMPD4-220ENST00000491319 C17orf102A2RUQ5 167 aa18.09■□□□□ 0.49
SMPD4-220ENST00000491319 CALM1P0DP23 149 aa18.09■□□□□ 0.49
SMPD4-220ENST00000491319 CALM2P0DP24 149 aa18.09■□□□□ 0.49
SMPD4-220ENST00000491319 CALM3P0DP25 149 aa18.09■□□□□ 0.49
SMPD4-220ENST00000491319 THPOP40225 353 aa18.09■□□□□ 0.49
SMPD4-220ENST00000491319 SP4Q02446 784 aa18.09■□□□□ 0.49
SMPD4-220ENST00000491319 KRT40Q6A162 431 aa18.09■□□□□ 0.49
SMPD4-220ENST00000491319 MICU3Q86XE3 530 aa18.09■□□□□ 0.49
SMPD4-220ENST00000491319 SLC12A7Q9Y666 1083 aa18.09■□□□□ 0.49
SMPD4-220ENST00000491319 MTCH2Q9Y6C9 303 aa18.09■□□□□ 0.49
SMPD4-220ENST00000491319 ABHD14A-ACY1A0A1B0GW23 586 aa18.08■□□□□ 0.48
SMPD4-220ENST00000491319 TREHO43280 583 aa18.08■□□□□ 0.48
SMPD4-220ENST00000491319 LGR5O75473 907 aa18.08■□□□□ 0.48
SMPD4-220ENST00000491319 UBE2SQ16763 222 aa18.08■□□□□ 0.48
SMPD4-220ENST00000491319 BMP2KLQ5H9B9 411 aa18.08■□□□□ 0.48
SMPD4-220ENST00000491319 TMTC3Q6ZXV5 915 aa18.08■□□□□ 0.48
SMPD4-220ENST00000491319 CCDC82Q8N4S0 544 aa18.08■□□□□ 0.48
SMPD4-220ENST00000491319 ASB2Q96Q27 587 aa18.08■□□□□ 0.48
SMPD4-220ENST00000491319 ZBED2Q9BTP6 218 aa18.08■□□□□ 0.48
SMPD4-220ENST00000491319 USP26Q9BXU7 913 aa18.08■□□□□ 0.48
SMPD4-220ENST00000491319 RNPEPQ9H4A4 650 aa18.08■□□□□ 0.48
SMPD4-220ENST00000491319 EMSYQ7Z589 1322 aa18.07■□□□□ 0.48
SMPD4-220ENST00000491319 RSPH10B2B2RC85 870 aa18.07■□□□□ 0.48
SMPD4-220ENST00000491319 GTPBP6O43824 516 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-220ENST00000491319 GJB5O95377 273 aa18.07■□□□□ 0.48
SMPD4-220ENST00000491319 RSPH10BP0C881 870 aa18.07■□□□□ 0.48
SMPD4-220ENST00000491319 POU3F3P20264 500 aaPredicted RBP18.07■□□□□ 0.48
SMPD4-220ENST00000491319 MRPS5P82675 430 aaKnown RBP18.07■□□□□ 0.48
SMPD4-220ENST00000491319 IKBKEQ14164 716 aa18.07■□□□□ 0.48
SMPD4-220ENST00000491319 UTP14CQ5TAP6 766 aaKnown RBP18.07■□□□□ 0.48
SMPD4-220ENST00000491319 XRRA1Q6P2D8 792 aa18.07■□□□□ 0.48
SMPD4-220ENST00000491319 SGMS1Q86VZ5 419 aa18.07■□□□□ 0.48
SMPD4-220ENST00000491319 FANCBQ8NB91 859 aa18.07■□□□□ 0.48
SMPD4-220ENST00000491319 PSTPIP2Q9H939 334 aa18.07■□□□□ 0.48
SMPD4-220ENST00000491319 RALGAPA2Q2PPJ7 1873 aa18.07■□□□□ 0.48
SMPD4-220ENST00000491319 ATG2AQ2TAZ0 1938 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 CNTNAP5Q8WYK1 1306 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 EFCAB14O75071 495 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 CTSHP09668 335 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 GRB10Q13322 594 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 SKIV2LQ15477 1246 aaKnown RBP18.06■□□□□ 0.48
SMPD4-220ENST00000491319 FAM117BQ6P1L5 589 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.06■□□□□ 0.48
SMPD4-220ENST00000491319 HEATR3Q7Z4Q2 680 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 NLRX1Q86UT6 975 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 DBF4BQ8NFT6 615 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 TCEANC2Q96MN5 208 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 SENP7Q9BQF6 1050 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 SETD4Q9NVD3 440 aa18.06■□□□□ 0.48
SMPD4-220ENST00000491319 ZNF215Q9UL58 517 aaPredicted RBP18.06■□□□□ 0.48
SMPD4-220ENST00000491319 XIRP2A4UGR9 3374 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 LPXNO60711 386 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 ATP9AO75110 1047 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 KCNA2P16389 499 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 ITGB5P18084 799 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 TFF2Q03403 129 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 MKRN4PQ13434 485 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-220ENST00000491319 APOA5Q6Q788 366 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
SMPD4-220ENST00000491319 ADAMTS19Q8TE59 1207 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 GDPD5Q8WTR4 605 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 LMBR1Q8WVP7 490 aa18.05■□□□□ 0.48
SMPD4-220ENST00000491319 GPRASP2Q96D09 838 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms