RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 FSCN1Q16658 493 aaKnown RBP15.4■□□□□ 0.06
DNMT3A-214ENST00000491288 CCDC62Q6P9F0 684 aa15.4■□□□□ 0.06
DNMT3A-214ENST00000491288 C16orf59Q7L2K0 433 aa15.4■□□□□ 0.06
DNMT3A-214ENST00000491288 FAM126BQ8IXS8 530 aa15.4■□□□□ 0.06
DNMT3A-214ENST00000491288 DAGLBQ8NCG7 672 aa15.4■□□□□ 0.06
DNMT3A-214ENST00000491288 RNPC3Q96LT9 517 aaKnown RBP15.4■□□□□ 0.06
DNMT3A-214ENST00000491288 PHF20Q9BVI0 1012 aa15.4■□□□□ 0.06
DNMT3A-214ENST00000491288 COL25A1Q9BXS0 654 aaPredicted RBP15.4■□□□□ 0.06
DNMT3A-214ENST00000491288 MLXIPQ9HAP2 919 aa15.4■□□□□ 0.06
DNMT3A-214ENST00000491288 CCDC194A0A1B0GVG4 234 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 SPATA31C2B4DYI2 1134 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 KPNA6O60684 536 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 CD4P01730 458 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 ICAM3P32942 547 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 SREBF1P36956 1147 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 ARHGAP4P98171 946 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 BEX3Q00994 111 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 KRT25Q7Z3Z0 450 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 RASGRP4Q8TDF6 673 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 GPRASP2Q96D09 838 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 C8orf76Q96K31 380 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 INPP4AQ96PE3 977 aaPredicted RBP15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 MXRA8Q9BRK3 442 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 JADE2Q9NQC1 790 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 POLR3EQ9NVU0 708 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 UBIAD1Q9Y5Z9 338 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 KIAA1217Q5T5P2 1943 aa15.39■□□□□ 0.05
DNMT3A-214ENST00000491288 A0A0U1RQG5 324 aaPredicted RBP15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 CABYRO75952 493 aa15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 RGS20O76081 388 aa15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 CYP3A4P08684 503 aa15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 KRT2P35908 639 aa15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 USP11P51784 963 aa15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 FOSBP53539 338 aa15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 MTMR1Q13613 665 aa15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 CEP55Q53EZ4 464 aa15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 TMEM63BQ5T3F8 832 aa15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 COPS5Q92905 334 aa15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.38■□□□□ 0.052e-7■■□□□ 12.3
DNMT3A-214ENST00000491288 SMC3Q9UQE7 1217 aa15.38■□□□□ 0.05
DNMT3A-214ENST00000491288 PRUNE2Q8WUY3 3088 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 ARIH2O95376 493 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 CD2BP2O95400 341 aaKnown RBP15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 GGPS1O95749 300 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 MYL3P08590 195 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 ST3GAL1Q11201 340 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 GNL2Q13823 731 aaKnown RBP15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 NONOQ15233 471 aaKnown RBP eCLIP15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 TMEM240Q5SV17 173 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 CELF3Q5SZQ8 465 aaKnown RBP15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 KRT40Q6A162 431 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 PLA2G4DQ86XP0 818 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 MAFAQ8NHW3 353 aaPredicted RBP15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 MYLIPQ8WY64 445 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 SPATA33Q96N06 139 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 SENP7Q9BQF6 1050 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 GJB4Q9NTQ9 266 aa15.37■□□□□ 0.05
DNMT3A-214ENST00000491288 NOP56O00567 594 aaKnown RBP15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 PPFIA4O75335 1185 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 MMP1P03956 469 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 ITGB5P18084 799 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 ARHGAP1Q07960 439 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 DGKDQ16760 1214 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 MYSM1Q5VVJ2 828 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 NIPA1Q7RTP0 329 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 TBCKQ8TEA7 893 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 AFG1LQ8WV93 481 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 SDF4Q9BRK5 362 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 SEZ6LQ9BYH1 1024 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 GRIN2DO15399 1336 aa15.36■□□□□ 0.05
DNMT3A-214ENST00000491288 MYH7BA7E2Y1 1941 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 A6NJR5 290 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 MEIS1O00470 390 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 ADAMTS3O15072 1205 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 SORBS3O60504 671 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 CSF2RAP15509 400 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 DNAJB2P25686 324 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 SP2Q02086 613 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 GUCY1B3Q02153 619 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 PPIGQ13427 754 aaKnown RBP eCLIP15.35■□□□□ 0.055e-8■■□□□ 12.3
DNMT3A-214ENST00000491288 GRIN2CQ14957 1233 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 CXCL17Q6UXB2 119 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 CYFIP1Q7L576 1253 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 HSCBQ8IWL3 235 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 EMID1Q96A84 441 aaPredicted RBP15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 NAP1L4Q99733 375 aaKnown RBP15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 MTG1Q9BT17 334 aaPredicted RBP15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 KCNH7Q9NS40 1196 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 PKD2L1Q9P0L9 805 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 TCEAL9Q9UHQ7 104 aa15.35■□□□□ 0.05
DNMT3A-214ENST00000491288 LRRC37A2A6NM11 1700 aa15.34■□□□□ 0.05
DNMT3A-214ENST00000491288 H3BQV1 296 aa15.34■□□□□ 0.05
DNMT3A-214ENST00000491288 K7ELQ4 463 aaPredicted RBP15.34■□□□□ 0.05
DNMT3A-214ENST00000491288 HSP90AA1P07900 732 aaKnown RBP15.34■□□□□ 0.05
DNMT3A-214ENST00000491288 UBA1P22314 1058 aaKnown RBP15.34■□□□□ 0.05
DNMT3A-214ENST00000491288 PTGS1P23219 599 aa15.34■□□□□ 0.05
DNMT3A-214ENST00000491288 GJB2P29033 226 aa15.34■□□□□ 0.05
DNMT3A-214ENST00000491288 SETQ01105 290 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms