RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 CCDC155Q8N6L0 562 aa20.68■□□□□ 0.9
HMGN1-219ENST00000491183 MAFAQ8NHW3 353 aaPredicted RBP20.68■□□□□ 0.9
HMGN1-219ENST00000491183 SENP7Q9BQF6 1050 aa20.68■□□□□ 0.9
HMGN1-219ENST00000491183 FTOQ9C0B1 505 aaKnown RBP eCLIP20.68■□□□□ 0.97e-6■■□□□ 12.9
HMGN1-219ENST00000491183 TUT1Q9H6E5 874 aaKnown RBP20.68■□□□□ 0.9
HMGN1-219ENST00000491183 GOLGA8AA7E2F4 631 aa20.67■□□□□ 0.9
HMGN1-219ENST00000491183 GOLGA8BA8MQT2 603 aa20.67■□□□□ 0.9
HMGN1-219ENST00000491183 NOP56O00567 594 aaKnown RBP20.67■□□□□ 0.9
HMGN1-219ENST00000491183 MYOGP15173 224 aa20.67■□□□□ 0.9
HMGN1-219ENST00000491183 ITGB5P18084 799 aa20.67■□□□□ 0.9
HMGN1-219ENST00000491183 TRAF7Q6Q0C0 670 aa20.67■□□□□ 0.9
HMGN1-219ENST00000491183 Q6ZUG5 572 aa20.67■□□□□ 0.9
HMGN1-219ENST00000491183 NLRX1Q86UT6 975 aa20.67■□□□□ 0.9
HMGN1-219ENST00000491183 JAKMIP1Q96N16 626 aaKnown RBP20.67■□□□□ 0.9
HMGN1-219ENST00000491183 UBIAD1Q9Y5Z9 338 aa20.67■□□□□ 0.9
HMGN1-219ENST00000491183 ACTN1P12814 892 aa20.66■□□□□ 0.9
HMGN1-219ENST00000491183 ATP2A2P16615 1042 aaKnown RBP20.66■□□□□ 0.9
HMGN1-219ENST00000491183 ADD1P35611 737 aaKnown RBP20.66■□□□□ 0.9
HMGN1-219ENST00000491183 APOBRQ0VD83 1088 aa20.66■□□□□ 0.9
HMGN1-219ENST00000491183 GPRASP2Q96D09 838 aa20.66■□□□□ 0.9
HMGN1-219ENST00000491183 USP26Q9BXU7 913 aa20.66■□□□□ 0.9
HMGN1-219ENST00000491183 PRDM12Q9H4Q4 367 aa20.66■□□□□ 0.9
HMGN1-219ENST00000491183 SPDYE3A6NKU9 549 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 NBNO60934 754 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 KCNA2P16389 499 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 HOXC8P31273 242 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 RCAN1P53805 252 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 SP4Q02446 784 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 TCTN1Q2MV58 587 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 ZNF618Q5T7W0 954 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 RNPEPQ9H4A4 650 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 SLC28A3Q9HAS3 691 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 RIC8AQ9NPQ8 531 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 PCDHA11Q9Y5I1 949 aa20.65■□□□□ 0.9
HMGN1-219ENST00000491183 MYO9BQ13459 2157 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 STXBP3O00186 592 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 CXCL10P02778 98 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 SMIM10L2AP0DMW4 78 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 SMIM10L2BP0DMW5 78 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 NAPAP54920 295 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 UTP14CQ5TAP6 766 aaKnown RBP20.64■□□□□ 0.89
HMGN1-219ENST00000491183 BLOC1S2Q6QNY1 142 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 SERINC5Q86VE9 423 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 TRIM50Q86XT4 487 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 GIMAP8Q8ND71 665 aaPredicted RBP20.64■□□□□ 0.89
HMGN1-219ENST00000491183 BRF1Q92994 677 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 JADE2Q9NQC1 790 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 NAP1L2Q9ULW6 460 aaPredicted RBP20.64■□□□□ 0.89
HMGN1-219ENST00000491183 EYSQ5T1H1 3165 aa20.64■□□□□ 0.89
HMGN1-219ENST00000491183 C17orf102A2RUQ5 167 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 TREHO43280 583 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 REC8O95072 547 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 PARNO95453 639 aaKnown RBP20.63■□□□□ 0.89
HMGN1-219ENST00000491183 RPS6KB1P23443 525 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 FGD1P98174 961 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 MBTPS1Q14703 1052 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 PPP1R18Q6NYC8 613 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.63■□□□□ 0.89
HMGN1-219ENST00000491183 FBXL16Q8N461 479 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 PHOSPHO2Q8TCD6 241 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 ATP6V0A1Q93050 837 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 PGBD1Q96JS3 809 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 SLC9A7Q96T83 725 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 AGXT2Q9BYV1 514 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 BARHL2Q9NY43 387 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 PTPRSQ13332 1948 aa20.63■□□□□ 0.89
HMGN1-219ENST00000491183 GSTTP1A0A1W2PQM5 241 aa20.62■□□□□ 0.89
HMGN1-219ENST00000491183 SMCO2A6NFE2 343 aa20.62■□□□□ 0.89
HMGN1-219ENST00000491183 DLL1O00548 723 aa20.62■□□□□ 0.89
HMGN1-219ENST00000491183 BAIAP3O94812 1187 aa20.62■□□□□ 0.89
HMGN1-219ENST00000491183 METAP2P50579 478 aaKnown RBP eCLIP20.62■□□□□ 0.89
HMGN1-219ENST00000491183 MTMR1Q13613 665 aa20.62■□□□□ 0.89
HMGN1-219ENST00000491183 ADGRE1Q14246 886 aa20.62■□□□□ 0.89
HMGN1-219ENST00000491183 CYP2W1Q8TAV3 490 aa20.62■□□□□ 0.89
HMGN1-219ENST00000491183 CDHR1Q96JP9 859 aa20.62■□□□□ 0.89
HMGN1-219ENST00000491183 SETD4Q9NVD3 440 aa20.62■□□□□ 0.89
HMGN1-219ENST00000491183 TMEM260Q9NX78 707 aa20.62■□□□□ 0.89
HMGN1-219ENST00000491183 PKD2L1Q9P0L9 805 aa20.62■□□□□ 0.89
HMGN1-219ENST00000491183 CHD9Q3L8U1 2897 aa20.61■□□□□ 0.89
HMGN1-219ENST00000491183 MAFGO15525 162 aa20.61■□□□□ 0.89
HMGN1-219ENST00000491183 TCF7P36402 384 aaPredicted RBP20.61■□□□□ 0.89
HMGN1-219ENST00000491183 CLK2P49760 499 aaKnown RBP20.61■□□□□ 0.89
HMGN1-219ENST00000491183 ADCY7P51828 1080 aa20.61■□□□□ 0.89
HMGN1-219ENST00000491183 CNKSR3Q6P9H4 555 aa20.61■□□□□ 0.89
HMGN1-219ENST00000491183 HERC6Q8IVU3 1022 aa20.61■□□□□ 0.89
HMGN1-219ENST00000491183 TEX2Q8IWB9 1127 aa20.61■□□□□ 0.89
HMGN1-219ENST00000491183 MXRA8Q9BRK3 442 aa20.61■□□□□ 0.89
HMGN1-219ENST00000491183 hCG_1984214I3L0E3 225 aa20.6■□□□□ 0.89
HMGN1-219ENST00000491183 ADAMTS3O15072 1205 aa20.6■□□□□ 0.89
HMGN1-219ENST00000491183 FOSP01100 380 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-219ENST00000491183 NEFLP07196 543 aa20.6■□□□□ 0.89
HMGN1-219ENST00000491183 THPOP40225 353 aa20.6■□□□□ 0.89
HMGN1-219ENST00000491183 WDR5P61964 334 aaKnown RBP20.6■□□□□ 0.89
HMGN1-219ENST00000491183 ADAM17P78536 824 aa20.6■□□□□ 0.89
HMGN1-219ENST00000491183 PFKFB3Q16875 520 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-219ENST00000491183 PPP2R2DQ66LE6 453 aa20.6■□□□□ 0.89
HMGN1-219ENST00000491183 ZNF713Q8N859 430 aaPredicted RBP20.6■□□□□ 0.89
HMGN1-219ENST00000491183 USP38Q8NB14 1042 aa20.6■□□□□ 0.89
HMGN1-219ENST00000491183 SEPT1Q8WYJ6 367 aa20.6■□□□□ 0.89
HMGN1-219ENST00000491183 GAS2L1Q99501 681 aaPredicted RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms