RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 GTF2IRD1Q9UHL9 959 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 MROH7Q68CQ1 1323 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 SMCO2A6NFE2 343 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 CLTBP09497 229 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 TLE2Q04725 743 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 GLT8D2Q9H1C3 349 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 PCDHA4Q9UN74 947 aa10.55□□□□□ -0.72
SUPT20H-220ENST00000490716 PPFIA4O75335 1185 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 DEXIO95424 95 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 FOSP01100 380 aaPredicted RBP10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 ARP10275 920 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 PSMC6P62333 389 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 MCTP2Q6DN12 878 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 CXCL17Q6UXB2 119 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 ABHD15Q6UXT9 468 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 NFXL1Q6ZNB6 911 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 EEPD1Q7L9B9 569 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 AFG1LQ8WV93 481 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 SLC5A5Q92911 643 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 POLR3EQ9NVU0 708 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 DYNC1LI2O43237 492 aaPredicted RBP10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 CNGA1P29973 690 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 MBTPS1Q14703 1052 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 GALNT17Q6IS24 598 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 GDF6Q6KF10 455 aaPredicted RBP10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 MTG1Q9BT17 334 aaPredicted RBP10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 KCNH7Q9NS40 1196 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 IGSF9BQ9UPX0 1349 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 UMODL1Q5DID0 1318 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 OR6J1Q8NGC5 347 aa10.54□□□□□ -0.72
SUPT20H-220ENST00000490716 PITPNM1O00562 1244 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 EVI5O60447 810 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 PSMD10O75832 226 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 USP11P51784 963 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 ADCY7P51828 1080 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 GNASQ5JWF2 1037 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 C7orf61Q8IZ16 206 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 LARP6Q9BRS8 491 aaKnown RBP10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 LLPHQ9BRT6 129 aaKnown RBP10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 SEC63Q9UGP8 760 aaKnown RBP10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 VAV3Q9UKW4 847 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 MAFBQ9Y5Q3 323 aaPredicted RBP10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 C6orf222P0C671 652 aaPredicted RBP10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 ARHGAP4P98171 946 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 CUL4AQ13619 759 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 ANKRD1Q15327 319 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 NBPF20Q3BBV1 942 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 MFSD5Q6N075 450 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 SERINC5Q86VE9 423 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 C4orf32Q8N8J7 132 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 CTDP1Q9Y5B0 961 aaPredicted RBP10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 EIF5BO60841 1220 aaKnown RBP10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 CEP55Q53EZ4 464 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 PPP4R3AQ6IN85 833 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 GJB4Q9NTQ9 266 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 PLXNA4Q9HCM2 1894 aa10.53□□□□□ -0.72
SUPT20H-220ENST00000490716 VCANP13611 3396 aa10.52□□□□□ -0.72
SUPT20H-220ENST00000490716 LINC00271P0C7V0 271 aa10.52□□□□□ -0.72
SUPT20H-220ENST00000490716 CCT2P78371 535 aaKnown RBP10.52□□□□□ -0.72
SUPT20H-220ENST00000490716 HEATR3Q7Z4Q2 680 aa10.52□□□□□ -0.72
SUPT20H-220ENST00000490716 HAS1Q92839 578 aa10.52□□□□□ -0.72
SUPT20H-220ENST00000490716 OSBPL7Q9BZF2 842 aa10.52□□□□□ -0.72
SUPT20H-220ENST00000490716 STARD7Q9NQZ5 370 aa10.52□□□□□ -0.72
SUPT20H-220ENST00000490716 LGALS2P05162 132 aa10.52□□□□□ -0.73
SUPT20H-220ENST00000490716 OXER1Q8TDS5 423 aa10.52□□□□□ -0.73
SUPT20H-220ENST00000490716 C22orf23Q9BZE7 217 aa10.52□□□□□ -0.73
SUPT20H-220ENST00000490716 CWC22Q9HCG8 908 aaKnown RBP10.52□□□□□ -0.73
SUPT20H-220ENST00000490716 VPS54Q9P1Q0 977 aa10.52□□□□□ -0.73
SUPT20H-220ENST00000490716 FAM109BQ6ICB4 259 aaPredicted RBP10.52□□□□□ -0.73
SUPT20H-220ENST00000490716 SEPT14Q6ZU15 432 aa10.52□□□□□ -0.73
SUPT20H-220ENST00000490716 PLPPR4Q7Z2D5 763 aa10.52□□□□□ -0.73
SUPT20H-220ENST00000490716 FERMT2Q96AC1 680 aa10.52□□□□□ -0.73
SUPT20H-220ENST00000490716 B4DLN1 442 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 MRPL12P52815 198 aaKnown RBP10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 DGKDQ16760 1214 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 MTMR9Q96QG7 549 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 TRPV6Q9H1D0 765 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 TRMT13Q9NUP7 481 aaKnown RBP10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 HERVK_113Q902F9 699 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 PGBD1Q96JS3 809 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 JAK2O60674 1132 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 GGPS1O95749 300 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 MMP1P03956 469 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 U2AF2P26368 475 aaKnown RBP eCLIP10.51□□□□□ -0.732e-6■■■■□ 21.1
SUPT20H-220ENST00000490716 SLC4A3P48751 1232 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 NAPAP54920 295 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 TARBP2Q15633 366 aaKnown RBP10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 TMEM240Q5SV17 173 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 GIMAP8Q8ND71 665 aaPredicted RBP10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 MPHOSPH6Q99547 160 aaKnown RBP10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 RNPEPQ9H4A4 650 aa10.51□□□□□ -0.73
SUPT20H-220ENST00000490716 MSH4O15457 936 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 PSEN2P49810 448 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 NEDD9Q14511 834 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 C9orf50Q5SZB4 431 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 BADQ92934 168 aa10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 ZFP91Q96JP5 570 aaPredicted RBP10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 RC3H2Q9HBD1 1191 aaKnown RBP10.5□□□□□ -0.73
SUPT20H-220ENST00000490716 LIMCH1Q9UPQ0 1083 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms