RNA–Protein interactions for RNA: ENST00000490692.1

PCSK9-202, Transcript of proprotein convertase subtilisin/kexin type 9, humanhuman

TSL 2

Gene PCSK9, Length 3,891 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9-202ENST00000490692 PMS1P54277 932 aaKnown RBP12.55□□□□□ -0.4
PCSK9-202ENST00000490692 DIXDC1Q155Q3 683 aa12.55□□□□□ -0.4
PCSK9-202ENST00000490692 VWA3BQ502W6 1294 aa12.55□□□□□ -0.4
PCSK9-202ENST00000490692 ATG9AQ7Z3C6 839 aa12.55□□□□□ -0.4
PCSK9-202ENST00000490692 ZC3H18Q86VM9 953 aaKnown RBP12.55□□□□□ -0.4
PCSK9-202ENST00000490692 DHTKD1Q96HY7 919 aaPredicted RBP12.55□□□□□ -0.4
PCSK9-202ENST00000490692 MED15Q96RN5 788 aa12.55□□□□□ -0.4
PCSK9-202ENST00000490692 ZCWPW1Q9H0M4 648 aa12.55□□□□□ -0.4
PCSK9-202ENST00000490692 GRIN2DO15399 1336 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 XDHP47989 1333 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 IRS4O14654 1257 aaPredicted RBP12.54□□□□□ -0.4
PCSK9-202ENST00000490692 PFDN1O60925 122 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 CALM1P0DP23 149 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 CALM2P0DP24 149 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 CALM3P0DP25 149 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 ZNF211Q13398 564 aaPredicted RBP12.54□□□□□ -0.4
PCSK9-202ENST00000490692 TRPM8Q7Z2W7 1104 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 LRRC34Q8IZ02 419 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 LCORLQ8N3X6 602 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 IGDCC4Q8TDY8 1250 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 SNX29Q8TEQ0 813 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 ITFG2Q969R8 447 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 RNF14Q9UBS8 474 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 DNM1LO00429 736 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 FLOT1O75955 427 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 SNUPNO95149 360 aaKnown RBP12.54□□□□□ -0.4
PCSK9-202ENST00000490692 BAG2O95816 211 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 COPB2P35606 906 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 PLCB4Q15147 1175 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 MAN2A1Q16706 1144 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 RAB3IPQ96QF0 476 aaPredicted RBP12.54□□□□□ -0.4
PCSK9-202ENST00000490692 SH3GL2Q99962 352 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 KDM4FA0A1W2PPD8 638 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 A0A1W2PQC6 194 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 CCDC189A1A4V9 331 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 LONP1P36776 959 aaKnown RBP12.54□□□□□ -0.4
PCSK9-202ENST00000490692 CUL1Q13616 776 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 SYNE4Q8N205 404 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 STAG2Q8N3U4 1231 aa12.54□□□□□ -0.4
PCSK9-202ENST00000490692 ZSCAN10Q96SZ4 725 aaPredicted RBP12.54□□□□□ -0.4
PCSK9-202ENST00000490692 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■■□□□ 12.1
PCSK9-202ENST00000490692 RASGRF2O14827 1237 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 H2AFZP0C0S5 128 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 GOLGA8HP0CJ92 632 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 SETSIPP0DME0 302 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 SRGNP10124 158 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 DDR1Q08345 913 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 BICDL1Q6ZP65 573 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 H2AFVQ71UI9 128 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 CCDC77Q9BR77 488 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 FGFR1OP2Q9NVK5 253 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 MCM9Q9NXL9 1143 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 CTTNBP2NLQ9P2B4 639 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 TCP11X1B4DZS4 312 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 USP17L12C9JPN9 530 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 USP17L21D6R901 530 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 SPOPO43791 374 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 GNAT2P19087 354 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 ELF3P78545 371 aaPredicted RBP12.53□□□□□ -0.4
PCSK9-202ENST00000490692 ADSSL1Q8N142 457 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 MTMR8Q96EF0 704 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 STRBPQ96SI9 672 aaKnown RBP12.53□□□□□ -0.4
PCSK9-202ENST00000490692 KLRC1P26715 233 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 RFX5P48382 616 aaPredicted RBP12.53□□□□□ -0.4
PCSK9-202ENST00000490692 PDE6CP51160 858 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 SLC8A3P57103 927 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 ARHGAP44Q17R89 818 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 EARS2Q5JPH6 523 aaKnown RBP12.53□□□□□ -0.4
PCSK9-202ENST00000490692 RFX8Q6ZV50 586 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 SCYL3Q8IZE3 742 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 ABTB1Q969K4 478 aaPredicted RBP12.53□□□□□ -0.4
PCSK9-202ENST00000490692 DLGAP2Q9P1A6 1054 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 SCOCQ9UIL1 159 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 DBR1Q9UK59 544 aaKnown RBP12.53□□□□□ -0.4
PCSK9-202ENST00000490692 C15orf41Q9Y2V0 281 aa12.53□□□□□ -0.4
PCSK9-202ENST00000490692 RASSF10A6NK89 507 aa12.52□□□□□ -0.4
PCSK9-202ENST00000490692 OPHN1O60890 802 aa12.52□□□□□ -0.4
PCSK9-202ENST00000490692 UBOX5O94941 541 aa12.52□□□□□ -0.4
PCSK9-202ENST00000490692 KRT15P19012 456 aa12.52□□□□□ -0.4
PCSK9-202ENST00000490692 STK4Q13043 487 aa12.52□□□□□ -0.4
PCSK9-202ENST00000490692 CEP128Q6ZU80 1094 aa12.52□□□□□ -0.4
PCSK9-202ENST00000490692 AGAP11Q8TF27 550 aa12.52□□□□□ -0.4
PCSK9-202ENST00000490692 DNAJC7Q99615 494 aa12.52□□□□□ -0.4
PCSK9-202ENST00000490692 GREM2Q9H772 168 aa12.52□□□□□ -0.4
PCSK9-202ENST00000490692 CPDO75976 1380 aa12.52□□□□□ -0.4
PCSK9-202ENST00000490692 C6orf163Q5TEZ5 329 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 WDR59Q6PJI9 974 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 GSTA5Q7RTV2 222 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 ARL10Q8N8L6 244 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 TEKT4Q8WW24 435 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 NUDCD1Q96RS6 583 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 OSBPL7Q9BZF2 842 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 SRCAPQ6ZRS2 3230 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 TSPY3P0CV98 308 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 TSPY8P0CW00 308 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 BCAMP50895 628 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.41
PCSK9-202ENST00000490692 TMEM154Q6P9G4 183 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 TMBIM4Q9HC24 238 aa12.52□□□□□ -0.41
PCSK9-202ENST00000490692 PAPOLBQ9NRJ5 636 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms