RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 KATNBL1Q9H079 304 aa14.92□□□□□ -0.02
SNX12-205ENST00000490561 CSRNP2Q9H175 543 aa14.92□□□□□ -0.02
SNX12-205ENST00000490561 LMBRD1Q9NUN5 540 aa14.92□□□□□ -0.02
SNX12-205ENST00000490561 LRWD1Q9UFC0 647 aa14.92□□□□□ -0.02
SNX12-205ENST00000490561 DDX41Q9UJV9 622 aaKnown RBP14.92□□□□□ -0.02
SNX12-205ENST00000490561 ZHX1Q9UKY1 873 aaPredicted RBP14.92□□□□□ -0.02
SNX12-205ENST00000490561 ADCY3O60266 1144 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 MBD3O95983 291 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 HMGCRP04035 888 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 UBA1P22314 1058 aaKnown RBP14.91□□□□□ -0.02
SNX12-205ENST00000490561 SEMA3FQ13275 785 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 ITGB3BPQ13352 177 aaPredicted RBP14.91□□□□□ -0.02
SNX12-205ENST00000490561 CCL14Q16627 93 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 RESP18Q5W5W9 173 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 KRT79Q5XKE5 535 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 TAPT1Q6NXT6 567 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 CCDC73Q6ZRK6 1079 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 OTOP1Q7RTM1 612 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 KCTD17Q8N5Z5 321 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 NEK9Q8TD19 979 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 JPH1Q9HDC5 661 aaPredicted RBP14.91□□□□□ -0.02
SNX12-205ENST00000490561 FLRT1Q9NZU1 646 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 SLC9A2Q9UBY0 812 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 TSKSQ9UJT2 592 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 VAV3Q9UKW4 847 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 TRIM17Q9Y577 477 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 TCHHQ07283 1943 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 KDM3AQ9Y4C1 1321 aa14.91□□□□□ -0.02
SNX12-205ENST00000490561 FAM237AA0A1B0GTK4 181 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 WDR64B1ANS9 1081 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 DHX15O43143 795 aaKnown RBP14.9□□□□□ -0.02
SNX12-205ENST00000490561 GH1P01241 217 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 TXNP10599 105 aaKnown RBP14.9□□□□□ -0.02
SNX12-205ENST00000490561 HSPA8P11142 646 aaKnown RBP14.9□□□□□ -0.02
SNX12-205ENST00000490561 MUTP22033 750 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 CYP2C19P33261 490 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 UBA7P41226 1012 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 LAMC2Q13753 1193 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 IL17AQ16552 155 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 DUSP28Q4G0W2 176 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 CCDC62Q6P9F0 684 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 METTL7BQ6UX53 244 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 B3GNT9Q6UX72 402 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 FSIP1Q8NA03 581 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 TRIB2Q92519 343 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 EMID1Q96A84 441 aaPredicted RBP14.9□□□□□ -0.02
SNX12-205ENST00000490561 CLIC6Q96NY7 704 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 CCSER1Q9C0I3 900 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 MLXIPQ9HAP2 919 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 PKD2L1Q9P0L9 805 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 CCDC39Q9UFE4 941 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 FAM184BQ9ULE4 1060 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 KIAA1217Q5T5P2 1943 aa14.9□□□□□ -0.02
SNX12-205ENST00000490561 ZSWIM8A7E2V4 1837 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 DKC1O60832 514 aaKnown RBP eCLIP14.89□□□□□ -0.03
SNX12-205ENST00000490561 ATP9AO75110 1047 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 GGPS1O95749 300 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 ZNF865P0CJ78 1059 aaPredicted RBP14.89□□□□□ -0.03
SNX12-205ENST00000490561 AKR1A1P14550 325 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 CAP1Q01518 475 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 SPIRE1Q08AE8 756 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 EPHA7Q15375 998 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 SKOR2Q2VWA4 1001 aaPredicted RBP14.89□□□□□ -0.03
SNX12-205ENST00000490561 CELF3Q5SZQ8 465 aaKnown RBP14.89□□□□□ -0.03
SNX12-205ENST00000490561 NCAPH2Q6IBW4 605 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 SHC4Q6S5L8 630 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 MIER3Q7Z3K6 550 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 DHX37Q8IY37 1157 aaKnown RBP14.89□□□□□ -0.03
SNX12-205ENST00000490561 SYMPKQ92797 1274 aaKnown RBP14.89□□□□□ -0.03
SNX12-205ENST00000490561 CALML4Q96GE6 196 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 CCDC34Q96HJ3 373 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 UNC45AQ9H3U1 944 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 USP25Q9UHP3 1055 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 Q9Y3F1 56 aa14.89□□□□□ -0.03
SNX12-205ENST00000490561 DDX49Q9Y6V7 483 aaKnown RBP14.89□□□□□ -0.03
SNX12-205ENST00000490561 POTEMA6NI47 508 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 FARP2O94887 1054 aaPredicted RBP14.88□□□□□ -0.03
SNX12-205ENST00000490561 HSPA1AP0DMV8 641 aaKnown RBP14.88□□□□□ -0.03
SNX12-205ENST00000490561 HSPA1BP0DMV9 641 aaKnown RBP14.88□□□□□ -0.03
SNX12-205ENST00000490561 CYBAP13498 195 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 TNFAIP2Q03169 654 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 GRIN1Q05586 938 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 NFKBIBQ15653 356 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 CCDC144BQ3MJ40 725 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 MIS18BP1Q6P0N0 1132 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 CYFIP1Q7L576 1253 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 CABP7Q86V35 215 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 RASSF8Q8NHQ8 419 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 CDK5RAP3Q96JB5 506 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 POLR3CQ9BUI4 534 aaPredicted RBP14.88□□□□□ -0.03
SNX12-205ENST00000490561 NT5C3AQ9H0P0 336 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 TUFT1Q9NNX1 390 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 PDGFCQ9NRA1 345 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 PTPN22Q9Y2R2 807 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 PCDHA10Q9Y5I2 948 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 DOCK3Q8IZD9 2030 aa14.88□□□□□ -0.03
SNX12-205ENST00000490561 DDX39AO00148 427 aaKnown RBP14.87□□□□□ -0.03
SNX12-205ENST00000490561 NOP56O00567 594 aaKnown RBP14.87□□□□□ -0.03
SNX12-205ENST00000490561 FOXN1O15353 648 aa14.87□□□□□ -0.03
SNX12-205ENST00000490561 CHMP2AO43633 222 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms