RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PPTC7Q8NI37 304 aa16.14■□□□□ 0.17
EXOSC3-207ENST00000490516 ATP6V0A1Q93050 837 aa16.14■□□□□ 0.17
EXOSC3-207ENST00000490516 GPCPD1Q9NPB8 672 aa16.14■□□□□ 0.17
EXOSC3-207ENST00000490516 DDX41Q9UJV9 622 aaKnown RBP16.14■□□□□ 0.17
EXOSC3-207ENST00000490516 EP300Q09472 2414 aaPredicted RBP16.14■□□□□ 0.17
EXOSC3-207ENST00000490516 GPAA1O43292 621 aa16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 SORBS3O60504 671 aa16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 ITGB1P05556 798 aa16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 ATF7P17544 494 aaPredicted RBP16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 SP100P23497 879 aaPredicted RBP16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 BTG3Q14201 252 aaPredicted RBP16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 IFNL3Q8IZI9 196 aa16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 SPPL3Q8TCT6 385 aa16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 DCAF4Q8WV16 495 aa16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 SUSD6Q92537 303 aa16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 EMID1Q96A84 441 aaPredicted RBP16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 TAAR1Q96RJ0 339 aa16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 PLVAPQ9BX97 442 aa16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 ZFHX4Q86UP3 3567 aa16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 TPRP12270 2363 aaKnown RBP16.13■□□□□ 0.17
EXOSC3-207ENST00000490516 TTC3P53804 2025 aa16.12■□□□□ 0.17
EXOSC3-207ENST00000490516 C17orf102A2RUQ5 167 aa16.12■□□□□ 0.17
EXOSC3-207ENST00000490516 TREHO43280 583 aa16.12■□□□□ 0.17
EXOSC3-207ENST00000490516 FTSJ3Q8IY81 847 aaKnown RBP16.12■□□□□ 0.17
EXOSC3-207ENST00000490516 KREMEN2Q8NCW0 462 aa16.12■□□□□ 0.17
EXOSC3-207ENST00000490516 TBC1D5Q92609 795 aa16.12■□□□□ 0.17
EXOSC3-207ENST00000490516 APPBP2Q92624 585 aa16.12■□□□□ 0.17
EXOSC3-207ENST00000490516 APBB2Q92870 758 aa16.12■□□□□ 0.17
EXOSC3-207ENST00000490516 ZNF689Q96CS4 500 aaPredicted RBP16.12■□□□□ 0.17
EXOSC3-207ENST00000490516 TSPY2A6NKD2 308 aa16.11■□□□□ 0.17
EXOSC3-207ENST00000490516 PATL2C9JE40 543 aaKnown RBP16.11■□□□□ 0.17
EXOSC3-207ENST00000490516 M0R2C6 588 aa16.11■□□□□ 0.17
EXOSC3-207ENST00000490516 LAMC2Q13753 1193 aa16.11■□□□□ 0.17
EXOSC3-207ENST00000490516 STXBP2Q15833 593 aa16.11■□□□□ 0.17
EXOSC3-207ENST00000490516 PPP4R3BQ5MIZ7 849 aa16.11■□□□□ 0.17
EXOSC3-207ENST00000490516 VN1R2Q8NFZ6 395 aa16.11■□□□□ 0.17
EXOSC3-207ENST00000490516 P2RX5Q93086 422 aa16.11■□□□□ 0.17
EXOSC3-207ENST00000490516 SMOC2Q9H3U7 446 aa16.11■□□□□ 0.17
EXOSC3-207ENST00000490516 COL20A1Q9P218 1284 aa16.11■□□□□ 0.17
EXOSC3-207ENST00000490516 MRPL42Q9Y6G3 142 aaKnown RBP16.11■□□□□ 0.17
EXOSC3-207ENST00000490516 PER2O15055 1255 aa16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 BRD1O95696 1058 aa16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 HOXD8P13378 290 aaPredicted RBP16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 GNAT2P19087 354 aa16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 PPARAQ07869 468 aa16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 USH1GQ495M9 461 aa16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 ASTLQ6HA08 431 aaPredicted RBP16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 KIAA2013Q8IYS2 634 aa16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 KLHL23Q8NBE8 558 aa16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 POF1BQ8WVV4 589 aa16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 C16orf70Q9BSU1 422 aa16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 MRVI1Q9Y6F6 885 aa16.1■□□□□ 0.17
EXOSC3-207ENST00000490516 PPFIA4O75335 1185 aa16.09■□□□□ 0.17
EXOSC3-207ENST00000490516 SLC3A2P08195 630 aaKnown RBP16.09■□□□□ 0.17
EXOSC3-207ENST00000490516 SMIM10L2AP0DMW4 78 aa16.09■□□□□ 0.17
EXOSC3-207ENST00000490516 SMIM10L2BP0DMW5 78 aa16.09■□□□□ 0.17
EXOSC3-207ENST00000490516 HOXC8P31273 242 aa16.09■□□□□ 0.17
EXOSC3-207ENST00000490516 HSDL1Q3SXM5 330 aa16.09■□□□□ 0.17
EXOSC3-207ENST00000490516 NSUN6Q8TEA1 469 aaKnown RBP16.09■□□□□ 0.17
EXOSC3-207ENST00000490516 TLE6Q9H808 572 aa16.09■□□□□ 0.17
EXOSC3-207ENST00000490516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
EXOSC3-207ENST00000490516 WDR19Q8NEZ3 1342 aa16.09■□□□□ 0.17
EXOSC3-207ENST00000490516 MYH6P13533 1939 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 RNF113AO15541 343 aaKnown RBP16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 CAND2O75155 1236 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 DGKIO75912 1065 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 ARP10275 920 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 CTDSPL2Q05D32 466 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 MTMR3Q13615 1198 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 RGS22Q8NE09 1264 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 SYTL5Q8TDW5 730 aaPredicted RBP16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 ATP8B4Q8TF62 1192 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 SPATA33Q96N06 139 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 RMDN3Q96TC7 470 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 APOL5Q9BWW9 433 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 RNPEPQ9H4A4 650 aa16.08■□□□□ 0.16
EXOSC3-207ENST00000490516 KAT6AQ92794 2004 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 ACACBO00763 2458 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 ENPP3O14638 875 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 PPFIA3O75145 1194 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 EIF2AK2P19525 551 aaKnown RBP16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 NOVP48745 357 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 NAALADL2Q58DX5 795 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 MYSM1Q5VVJ2 828 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 UBALD2Q8IYN6 164 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 KBTBD3Q8NAB2 608 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 IWS1Q96ST2 819 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 S1PR5Q9H228 398 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 TSHZ2Q9NRE2 1034 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 PNMA2Q9UL42 364 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 SORCS3Q9UPU3 1222 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 DOCK5Q9H7D0 1870 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 FRYLO94915 3013 aa16.07■□□□□ 0.16
EXOSC3-207ENST00000490516 CEP250Q9BV73 2442 aa16.06■□□□□ 0.16
EXOSC3-207ENST00000490516 RANBP6O60518 1105 aaKnown RBP16.06■□□□□ 0.16
EXOSC3-207ENST00000490516 GHRP10912 638 aa16.06■□□□□ 0.16
EXOSC3-207ENST00000490516 PUM1Q14671 1186 aaKnown RBP eCLIP16.06■□□□□ 0.16
EXOSC3-207ENST00000490516 FAM26DQ5JW98 314 aa16.06■□□□□ 0.16
EXOSC3-207ENST00000490516 KCNG4Q8TDN1 519 aa16.06■□□□□ 0.16
EXOSC3-207ENST00000490516 MICAL1Q8TDZ2 1067 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms