RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 GNPTABQ3T906 1256 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 METTL7BQ6UX53 244 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 TMTC3Q6ZXV5 915 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 TMCO2Q7Z6W1 182 aaPredicted RBP22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 SERINC5Q86VE9 423 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 SMARCC2Q8TAQ2 1214 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 PPM1EQ8WY54 764 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 GPR20Q99678 358 aa22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 TUT1Q9H6E5 874 aaKnown RBP22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 SEC63Q9UGP8 760 aaKnown RBP22.37■■□□□ 1.17
TNFRSF1B-202ENST00000489921 EPOPA6NHQ4 379 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 RFXAPO00287 272 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 PARNO95453 639 aaKnown RBP22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 IGFBP4P22692 258 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 TAP1Q03518 808 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 NEDD9Q14511 834 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 XRRA1Q6P2D8 792 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 CNKSR3Q6P9H4 555 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 RASEFQ8IZ41 740 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 CCDC82Q8N4S0 544 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 RNPEPQ9H4A4 650 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 PSTPIP2Q9H939 334 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 SLC12A7Q9Y666 1083 aa22.36■■□□□ 1.17
TNFRSF1B-202ENST00000489921 DEFB103AP81534 67 aa22.35■■□□□ 1.17
TNFRSF1B-202ENST00000489921 CCDC85BQ15834 202 aaPredicted RBP22.35■■□□□ 1.17
TNFRSF1B-202ENST00000489921 ADCK5Q3MIX3 580 aa22.35■■□□□ 1.17
TNFRSF1B-202ENST00000489921 TSGA10IPQ3SY00 556 aa22.35■■□□□ 1.17
TNFRSF1B-202ENST00000489921 SPRED2Q7Z698 418 aa22.35■■□□□ 1.17
TNFRSF1B-202ENST00000489921 CUL5Q93034 780 aa22.35■■□□□ 1.17
TNFRSF1B-202ENST00000489921 SENP7Q9BQF6 1050 aa22.35■■□□□ 1.17
TNFRSF1B-202ENST00000489921 TREHO43280 583 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 ATP9AO75110 1047 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 SMIM10L2AP0DMW4 78 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 SMIM10L2BP0DMW5 78 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 ITGB5P18084 799 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 FUT2Q10981 343 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 MKRN4PQ13434 485 aaPredicted RBP22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 UBE2SQ16763 222 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 TCEANC2Q96MN5 208 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 NEK1Q96PY6 1258 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 USP26Q9BXU7 913 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 OSBPL7Q9BZF2 842 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 CERS4Q9HA82 394 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 BRPF3Q9ULD4 1205 aa22.34■■□□□ 1.17
TNFRSF1B-202ENST00000489921 PRRC2BQ5JSZ5 2229 aaKnown RBP22.33■■□□□ 1.17
TNFRSF1B-202ENST00000489921 C17orf102A2RUQ5 167 aa22.33■■□□□ 1.17
TNFRSF1B-202ENST00000489921 POU3F3P20264 500 aaPredicted RBP22.33■■□□□ 1.17
TNFRSF1B-202ENST00000489921 ADAM17P78536 824 aa22.33■■□□□ 1.17
TNFRSF1B-202ENST00000489921 APOA5Q6Q788 366 aa22.33■■□□□ 1.17
TNFRSF1B-202ENST00000489921 MICU3Q86XE3 530 aa22.33■■□□□ 1.17
TNFRSF1B-202ENST00000489921 TRIM50Q86XT4 487 aa22.33■■□□□ 1.17
TNFRSF1B-202ENST00000489921 ATP6V0A1Q93050 837 aa22.33■■□□□ 1.17
TNFRSF1B-202ENST00000489921 MICAL3Q7RTP6 2002 aa22.32■■□□□ 1.16
TNFRSF1B-202ENST00000489921 ABHD14A-ACY1A0A1B0GW23 586 aa22.32■■□□□ 1.16
TNFRSF1B-202ENST00000489921 LCHNA4D1U4 455 aa22.32■■□□□ 1.16
TNFRSF1B-202ENST00000489921 NOP56O00567 594 aaKnown RBP22.32■■□□□ 1.16
TNFRSF1B-202ENST00000489921 KCNA2P16389 499 aa22.32■■□□□ 1.16
TNFRSF1B-202ENST00000489921 TYW1BQ6NUM6 668 aa22.32■■□□□ 1.16
TNFRSF1B-202ENST00000489921 UBIAD1Q9Y5Z9 338 aa22.32■■□□□ 1.16
TNFRSF1B-202ENST00000489921 CNTNAP5Q8WYK1 1306 aa22.31■■□□□ 1.16
TNFRSF1B-202ENST00000489921 THPOP40225 353 aa22.31■■□□□ 1.16
TNFRSF1B-202ENST00000489921 KCNJ6P48051 423 aa22.31■■□□□ 1.16
TNFRSF1B-202ENST00000489921 TJAP1Q5JTD0 557 aa22.31■■□□□ 1.16
TNFRSF1B-202ENST00000489921 RNF20Q5VTR2 975 aa22.31■■□□□ 1.16
TNFRSF1B-202ENST00000489921 DHX32Q7L7V1 743 aaKnown RBP22.31■■□□□ 1.16
TNFRSF1B-202ENST00000489921 GPRASP2Q96D09 838 aa22.31■■□□□ 1.16
TNFRSF1B-202ENST00000489921 FAM217BQ9NTX9 383 aaPredicted RBP22.31■■□□□ 1.16
TNFRSF1B-202ENST00000489921 SETD4Q9NVD3 440 aa22.31■■□□□ 1.16
TNFRSF1B-202ENST00000489921 MTCH2Q9Y6C9 303 aa22.31■■□□□ 1.16
TNFRSF1B-202ENST00000489921 COL4A4P53420 1690 aaPredicted RBP22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 RSPH10B2B2RC85 870 aa22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 KIF28PB7ZC32 967 aa22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 TLL1O43897 1013 aa22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 LGR5O75473 907 aa22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 RSPH10BP0C881 870 aa22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 WWC2Q6AWC2 1192 aa22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 NLRX1Q86UT6 975 aa22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 PCDHA6Q9UN73 950 aa22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 PCDHA8Q9Y5H6 950 aa22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 BDP1A6H8Y1 2624 aa22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 KAT6AQ92794 2004 aa22.3■■□□□ 1.16
TNFRSF1B-202ENST00000489921 GSTTP1A0A1W2PQM5 241 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 LPXNO60711 386 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 GJB5O95377 273 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 SP4Q02446 784 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 IKBKEQ14164 716 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 PLEKHG4Q58EX7 1191 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 UTP14CQ5TAP6 766 aaKnown RBP22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 KRT40Q6A162 431 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 HEATR3Q7Z4Q2 680 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 DBF4BQ8NFT6 615 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 ATXN2LQ8WWM7 1075 aaKnown RBP22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 ARNTL2Q8WYA1 636 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 KCNB2Q92953 911 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 SIP14410 1827 aa22.29■■□□□ 1.16
TNFRSF1B-202ENST00000489921 CDC45O75419 566 aa22.28■■□□□ 1.16
TNFRSF1B-202ENST00000489921 SYMPKQ92797 1274 aaKnown RBP22.28■■□□□ 1.16
TNFRSF1B-202ENST00000489921 JADE2Q9NQC1 790 aa22.28■■□□□ 1.16
TNFRSF1B-202ENST00000489921 RBM28Q9NW13 759 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms