RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 SREBF1P36956 1147 aa15.27■□□□□ 0.04
CCL28-202ENST00000489442 PSEN2P49810 448 aa15.27■□□□□ 0.04
CCL28-202ENST00000489442 FPGSQ05932 587 aa15.27■□□□□ 0.04
CCL28-202ENST00000489442 PTPN11Q06124 597 aaPredicted RBP15.27■□□□□ 0.04
CCL28-202ENST00000489442 TMEM199Q8N511 208 aa15.27■□□□□ 0.04
CCL28-202ENST00000489442 MXRA8Q9BRK3 442 aa15.27■□□□□ 0.04
CCL28-202ENST00000489442 C22orf23Q9BZE7 217 aa15.27■□□□□ 0.04
CCL28-202ENST00000489442 HIPK3Q9H422 1215 aa15.27■□□□□ 0.04
CCL28-202ENST00000489442 BCAS3Q9H6U6 928 aa15.27■□□□□ 0.04
CCL28-202ENST00000489442 JADE2Q9NQC1 790 aa15.27■□□□□ 0.04
CCL28-202ENST00000489442 TRMT13Q9NUP7 481 aaKnown RBP15.27■□□□□ 0.04
CCL28-202ENST00000489442 TRIP12Q14669 1992 aaPredicted RBP15.26■□□□□ 0.03
CCL28-202ENST00000489442 XBP1P17861 261 aa15.26■□□□□ 0.03
CCL28-202ENST00000489442 ARHGAP4P98171 946 aa15.26■□□□□ 0.03
CCL28-202ENST00000489442 MFSD10Q14728 455 aa15.26■□□□□ 0.03
CCL28-202ENST00000489442 KIAA0753Q2KHM9 967 aa15.26■□□□□ 0.03
CCL28-202ENST00000489442 CEP55Q53EZ4 464 aa15.26■□□□□ 0.03
CCL28-202ENST00000489442 MFSD5Q6N075 450 aa15.26■□□□□ 0.03
CCL28-202ENST00000489442 KAT2BQ92831 832 aa15.26■□□□□ 0.03
CCL28-202ENST00000489442 ATP9AO75110 1047 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 F2P00734 622 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 CYP2C9P11712 490 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 CYP2C18P33260 490 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 ME3Q16798 604 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 UTP14CQ5TAP6 766 aaKnown RBP15.25■□□□□ 0.03
CCL28-202ENST00000489442 NECAB1Q8N987 351 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 CYP2W1Q8TAV3 490 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 RASGRP4Q8TDF6 673 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 WASF1Q92558 559 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 SDF4Q9BRK5 362 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 KCNH7Q9NS40 1196 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 LAMA3Q16787 3333 aa15.25■□□□□ 0.03
CCL28-202ENST00000489442 LAMA2P24043 3122 aaKnown RBP15.24■□□□□ 0.03
CCL28-202ENST00000489442 H3BRB1 525 aa15.24■□□□□ 0.03
CCL28-202ENST00000489442 LGALS2P05162 132 aa15.24■□□□□ 0.03
CCL28-202ENST00000489442 HOXD8P13378 290 aaPredicted RBP15.24■□□□□ 0.03
CCL28-202ENST00000489442 KCNA2P16389 499 aa15.24■□□□□ 0.03
CCL28-202ENST00000489442 PPIGQ13427 754 aaKnown RBP eCLIP15.24■□□□□ 0.03
CCL28-202ENST00000489442 PTGISQ16647 500 aa15.24■□□□□ 0.03
CCL28-202ENST00000489442 AIFM3Q96NN9 605 aa15.24■□□□□ 0.03
CCL28-202ENST00000489442 GPR20Q99678 358 aa15.24■□□□□ 0.03
CCL28-202ENST00000489442 TUT1Q9H6E5 874 aaKnown RBP15.24■□□□□ 0.03
CCL28-202ENST00000489442 ORC3Q9UBD5 711 aaPredicted RBP15.24■□□□□ 0.03
CCL28-202ENST00000489442 HDAC6Q9UBN7 1215 aa15.24■□□□□ 0.03
CCL28-202ENST00000489442 ZNF215Q9UL58 517 aaPredicted RBP15.24■□□□□ 0.03
CCL28-202ENST00000489442 PCDHA4Q9UN74 947 aa15.24■□□□□ 0.03
CCL28-202ENST00000489442 MEIS1O00470 390 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 ADAMTS3O15072 1205 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 CSF2RAP15509 400 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 FXR1P51114 621 aaKnown RBP eCLIP15.23■□□□□ 0.03
CCL28-202ENST00000489442 CCL23P55773 120 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 SHHQ15465 462 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 GALNT17Q6IS24 598 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 NIPA1Q7RTP0 329 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 PLA2G4DQ86XP0 818 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 BLIDQ8IZY5 108 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 FAM177A1Q8N128 213 aaPredicted RBP15.23■□□□□ 0.03
CCL28-202ENST00000489442 RETREG2Q8NC44 543 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 SEPT1Q8WYJ6 367 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 GTF3C6Q969F1 213 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 C16orf70Q9BSU1 422 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 NOC4LQ9BVI4 516 aaKnown RBP15.23■□□□□ 0.03
CCL28-202ENST00000489442 JPH1Q9HDC5 661 aaPredicted RBP15.23■□□□□ 0.03
CCL28-202ENST00000489442 GTF2IRD1Q9UHL9 959 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 LIMCH1Q9UPQ0 1083 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 STK36Q9NRP7 1315 aa15.23■□□□□ 0.03
CCL28-202ENST00000489442 HAS3O00219 553 aa15.22■□□□□ 0.03
CCL28-202ENST00000489442 DTNBO60941 627 aa15.22■□□□□ 0.03
CCL28-202ENST00000489442 LARGE1O95461 756 aa15.22■□□□□ 0.03
CCL28-202ENST00000489442 CYP3A4P08684 503 aa15.22■□□□□ 0.03
CCL28-202ENST00000489442 ARP10275 920 aa15.22■□□□□ 0.03
CCL28-202ENST00000489442 TCF7P36402 384 aaPredicted RBP15.22■□□□□ 0.03
CCL28-202ENST00000489442 BFSP2Q13515 415 aa15.22■□□□□ 0.03
CCL28-202ENST00000489442 GDF6Q6KF10 455 aaPredicted RBP15.22■□□□□ 0.03
CCL28-202ENST00000489442 SESTD1Q86VW0 696 aa15.22■□□□□ 0.03
CCL28-202ENST00000489442 CCDC155Q8N6L0 562 aa15.22■□□□□ 0.03
CCL28-202ENST00000489442 SLC9A2Q9UBY0 812 aa15.22■□□□□ 0.03
CCL28-202ENST00000489442 KCNJ14Q9UNX9 436 aa15.22■□□□□ 0.03
CCL28-202ENST00000489442 CTDNEP1O95476 244 aa15.21■□□□□ 0.03
CCL28-202ENST00000489442 RBM25P49756 843 aaKnown RBP15.21■□□□□ 0.03
CCL28-202ENST00000489442 LRIT3Q3SXY7 679 aa15.21■□□□□ 0.03
CCL28-202ENST00000489442 PRR16Q569H4 304 aa15.21■□□□□ 0.03
CCL28-202ENST00000489442 UMODL1Q5DID0 1318 aa15.21■□□□□ 0.03
CCL28-202ENST00000489442 C9orf50Q5SZB4 431 aa15.21■□□□□ 0.03
CCL28-202ENST00000489442 GLG1Q92896 1179 aa15.21■□□□□ 0.03
CCL28-202ENST00000489442 AZI2Q9H6S1 392 aa15.21■□□□□ 0.03
CCL28-202ENST00000489442 AGO4Q9HCK5 861 aaKnown RBP15.21■□□□□ 0.03
CCL28-202ENST00000489442 TCEAL9Q9UHQ7 104 aa15.21■□□□□ 0.03
CCL28-202ENST00000489442 NFASCO94856 1347 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 C17orf102A2RUQ5 167 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 FAM86B1E9PN63 330 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 FAM86B2P0C5J1 330 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 GNAT1P11488 350 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 USP11P51784 963 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 EPHB4P54760 987 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 SETQ01105 290 aaPredicted RBP15.2■□□□□ 0.02
CCL28-202ENST00000489442 TRIM50Q86XT4 487 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 RPUSD2Q8IZ73 545 aaKnown RBP15.2■□□□□ 0.02
CCL28-202ENST00000489442 DAGLBQ8NCG7 672 aa15.2■□□□□ 0.02
CCL28-202ENST00000489442 SCLYQ96I15 445 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms