RNA–Protein interactions for RNA: ENST00000489434.3

SFXN3-207, Transcript of sideroflexin 3, humanhuman

TSL 3

Gene SFXN3, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-207ENST00000489434 DBF4BQ8NFT6 615 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 NCOA7Q8NI08 942 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 EXOC6Q8TAG9 804 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 CUL5Q93034 780 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 WNT8BQ93098 351 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 FAM122AQ96E09 287 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 SAMD11Q96NU1 681 aa13.78□□□□□ -0.2
SFXN3-207ENST00000489434 FIBPO43427 364 aa13.77□□□□□ -0.21
SFXN3-207ENST00000489434 TCTN1Q2MV58 587 aa13.77□□□□□ -0.21
SFXN3-207ENST00000489434 PLEKHG4Q58EX7 1191 aa13.77□□□□□ -0.21
SFXN3-207ENST00000489434 TTC22Q5TAA0 569 aa13.77□□□□□ -0.21
SFXN3-207ENST00000489434 XRRA1Q6P2D8 792 aa13.77□□□□□ -0.21
SFXN3-207ENST00000489434 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.77□□□□□ -0.21
SFXN3-207ENST00000489434 GIMAP8Q8ND71 665 aaPredicted RBP13.77□□□□□ -0.21
SFXN3-207ENST00000489434 YME1L1Q96TA2 773 aa13.77□□□□□ -0.21
SFXN3-207ENST00000489434 RAPGEFL1Q9UHV5 662 aa13.77□□□□□ -0.21
SFXN3-207ENST00000489434 SPATA31C2B4DYI2 1134 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 CYP21A2P08686 494 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 CTSHP09668 335 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 ICAM3P32942 547 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 KIF5BP33176 963 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 PLA2G5P39877 138 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 TROAPQ12815 778 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 TMEM31Q5JXX7 168 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 CYFIP1Q7L576 1253 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 CTCFLQ8NI51 663 aaPredicted RBP13.76□□□□□ -0.21
SFXN3-207ENST00000489434 SMARCC2Q8TAQ2 1214 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 PIBF1Q8WXW3 757 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 RRP36Q96EU6 259 aaKnown RBP13.76□□□□□ -0.21
SFXN3-207ENST00000489434 ZFP91Q96JP5 570 aaPredicted RBP13.76□□□□□ -0.21
SFXN3-207ENST00000489434 YTHDC1Q96MU7 727 aaKnown RBP13.76□□□□□ -0.21
SFXN3-207ENST00000489434 INPP4AQ96PE3 977 aaPredicted RBP13.76□□□□□ -0.21
SFXN3-207ENST00000489434 RNPEPQ9H4A4 650 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 UBE2ZQ9H832 354 aaPredicted RBP13.76□□□□□ -0.21
SFXN3-207ENST00000489434 SEC63Q9UGP8 760 aaKnown RBP13.76□□□□□ -0.21
SFXN3-207ENST00000489434 HCN4Q9Y3Q4 1203 aa13.76□□□□□ -0.21
SFXN3-207ENST00000489434 FRMPD4Q14CM0 1322 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 E7EWF7 191 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 TREHO43280 583 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 CYTH3O43739 400 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 KCNA5P22460 613 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 HOXC8P31273 242 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 MRPS9P82933 396 aaKnown RBP13.75□□□□□ -0.21
SFXN3-207ENST00000489434 HTRA4P83105 476 aaPredicted RBP13.75□□□□□ -0.21
SFXN3-207ENST00000489434 HIC1Q14526 733 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 TIGD5Q53EQ6 642 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 NLRX1Q86UT6 975 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 APBB2Q92870 758 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 GPKOWQ92917 476 aaPredicted RBP eCLIP13.75□□□□□ -0.21
SFXN3-207ENST00000489434 MRPL38Q96DV4 380 aaKnown RBP13.75□□□□□ -0.21
SFXN3-207ENST00000489434 GPR20Q99678 358 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 SENP7Q9BQF6 1050 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 LZTS2Q9BRK4 669 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 C17orf80Q9BSJ5 609 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 IL25Q9H293 177 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 SETD4Q9NVD3 440 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 RTEL1Q9NZ71 1219 aa13.75□□□□□ -0.21
SFXN3-207ENST00000489434 UPP2O95045 317 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 CHMLP26374 656 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 GNAQP50148 359 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 ARHGAP4P98171 946 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 PTH1RQ03431 593 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 SLC35G1Q2M3R5 365 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 PUS10Q3MIT2 529 aaKnown RBP13.74□□□□□ -0.21
SFXN3-207ENST00000489434 LEXMQ3ZCV2 418 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 EPC2Q52LR7 807 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 UTP14CQ5TAP6 766 aaKnown RBP13.74□□□□□ -0.21
SFXN3-207ENST00000489434 PCNX4Q63HM2 1172 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 CASC1Q6TDU7 716 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 RSPH3Q86UC2 560 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 SP7Q8TDD2 431 aaPredicted RBP13.74□□□□□ -0.21
SFXN3-207ENST00000489434 TOP1MTQ969P6 601 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 CDHR1Q96JP9 859 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 MAP3K14Q99558 947 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 SPZ1Q9BXG8 430 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 IFIH1Q9BYX4 1025 aaKnown RBP13.74□□□□□ -0.21
SFXN3-207ENST00000489434 EPHX3Q9H6B9 360 aa13.74□□□□□ -0.21
SFXN3-207ENST00000489434 NRCAMQ92823 1304 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.73□□□□□ -0.21
SFXN3-207ENST00000489434 PIK3CDO00329 1044 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 DDAH1O94760 285 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 GSPT1P15170 499 aaKnown RBP13.73□□□□□ -0.21
SFXN3-207ENST00000489434 SMARCA1P28370 1054 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 SP4Q02446 784 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 MKRN4PQ13434 485 aaPredicted RBP13.73□□□□□ -0.21
SFXN3-207ENST00000489434 TAF2Q6P1X5 1199 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 NFXL1Q6ZNB6 911 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 TRIM50Q86XT4 487 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 TMTC2Q8N394 836 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 LMBR1Q8WVP7 490 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 LRFN3Q9BTN0 628 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 BCAS3Q9H6U6 928 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 SENP2Q9HC62 589 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 FAM50BQ9Y247 325 aa13.73□□□□□ -0.21
SFXN3-207ENST00000489434 ARIH1Q9Y4X5 557 aaPredicted RBP13.73□□□□□ -0.21
SFXN3-207ENST00000489434 DOCK5Q9H7D0 1870 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 H3BNC9 293 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 SSTR3P32745 418 aaPredicted RBP13.72□□□□□ -0.21
SFXN3-207ENST00000489434 GPM6BQ13491 265 aa13.72□□□□□ -0.21
SFXN3-207ENST00000489434 PTCRAQ6ISU1 281 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms