RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 FAM177A1Q8N128 213 aaPredicted RBP21.74■■□□□ 1.07
MRPL55-230ENST00000489430 RETREG2Q8NC44 543 aa21.74■■□□□ 1.07
MRPL55-230ENST00000489430 HERVK_113Q902F9 699 aa21.74■■□□□ 1.07
MRPL55-230ENST00000489430 GPR20Q99678 358 aa21.74■■□□□ 1.07
MRPL55-230ENST00000489430 C6orf50Q9HD87 102 aa21.74■■□□□ 1.07
MRPL55-230ENST00000489430 PDRG1Q9NUG6 133 aa21.74■■□□□ 1.07
MRPL55-230ENST00000489430 UMODL1Q5DID0 1318 aa21.74■■□□□ 1.07
MRPL55-230ENST00000489430 TMEM265A0A087WTH1 108 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.73■■□□□ 1.07
MRPL55-230ENST00000489430 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.73■■□□□ 1.07
MRPL55-230ENST00000489430 H3BRB1 525 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 LGALS2P05162 132 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 KCNA2P16389 499 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 SREBF1P36956 1147 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 CCL23P55773 120 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 GDF6Q6KF10 455 aaPredicted RBP21.73■■□□□ 1.07
MRPL55-230ENST00000489430 ZNF365Q70YC5 407 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 DEFB123Q8N688 67 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 CCDC148Q8NFR7 591 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 BICD2Q8TD16 824 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 AFAP1L1Q8TED9 768 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 ANO3Q9BYT9 981 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 UPF3BQ9BZI7 483 aaKnown RBP21.73■■□□□ 1.07
MRPL55-230ENST00000489430 TUT1Q9H6E5 874 aaKnown RBP21.73■■□□□ 1.07
MRPL55-230ENST00000489430 SH3GLB2Q9NR46 395 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 HDAC6Q9UBN7 1215 aa21.73■■□□□ 1.07
MRPL55-230ENST00000489430 LAMA2P24043 3122 aaKnown RBP21.73■■□□□ 1.07
MRPL55-230ENST00000489430 FGBP02675 491 aa21.72■■□□□ 1.07
MRPL55-230ENST00000489430 CHMP4BP1P59074 171 aa21.72■■□□□ 1.07
MRPL55-230ENST00000489430 CEP55Q53EZ4 464 aa21.72■■□□□ 1.07
MRPL55-230ENST00000489430 CPLX2Q6PUV4 134 aaKnown RBP21.72■■□□□ 1.07
MRPL55-230ENST00000489430 NIPA1Q7RTP0 329 aa21.72■■□□□ 1.07
MRPL55-230ENST00000489430 TRIM22Q8IYM9 498 aa21.72■■□□□ 1.07
MRPL55-230ENST00000489430 CTAGE1Q96RT6 745 aa21.72■■□□□ 1.07
MRPL55-230ENST00000489430 MXRA8Q9BRK3 442 aa21.72■■□□□ 1.07
MRPL55-230ENST00000489430 ZNF215Q9UL58 517 aaPredicted RBP21.72■■□□□ 1.07
MRPL55-230ENST00000489430 IQCF3P0C7M6 154 aa21.71■■□□□ 1.07
MRPL55-230ENST00000489430 HOXC8P31273 242 aa21.71■■□□□ 1.07
MRPL55-230ENST00000489430 PTK7Q13308 1070 aa21.71■■□□□ 1.07
MRPL55-230ENST00000489430 PHKBQ93100 1093 aa21.71■■□□□ 1.07
MRPL55-230ENST00000489430 ALG1Q9BT22 464 aa21.71■■□□□ 1.07
MRPL55-230ENST00000489430 BCAS3Q9H6U6 928 aa21.71■■□□□ 1.07
MRPL55-230ENST00000489430 CPLX1O14810 134 aa21.7■■□□□ 1.06
MRPL55-230ENST00000489430 ATP9AO75110 1047 aa21.7■■□□□ 1.06
MRPL55-230ENST00000489430 ACRP10323 421 aa21.7■■□□□ 1.06
MRPL55-230ENST00000489430 CCT2P78371 535 aaKnown RBP21.7■■□□□ 1.06
MRPL55-230ENST00000489430 ANKRD1Q15327 319 aa21.7■■□□□ 1.06
MRPL55-230ENST00000489430 REXO1Q8N1G1 1221 aaKnown RBP21.7■■□□□ 1.06
MRPL55-230ENST00000489430 SEPT1Q8WYJ6 367 aa21.7■■□□□ 1.06
MRPL55-230ENST00000489430 SLC26A6Q9BXS9 759 aa21.7■■□□□ 1.06
MRPL55-230ENST00000489430 KCNH7Q9NS40 1196 aa21.7■■□□□ 1.06
MRPL55-230ENST00000489430 MEIS1O00470 390 aa21.69■■□□□ 1.06
MRPL55-230ENST00000489430 SORBS3O60504 671 aa21.69■■□□□ 1.06
MRPL55-230ENST00000489430 CYP3A4P08684 503 aa21.69■■□□□ 1.06
MRPL55-230ENST00000489430 GNAT1P11488 350 aa21.69■■□□□ 1.06
MRPL55-230ENST00000489430 ARHGAP4P98171 946 aa21.69■■□□□ 1.06
MRPL55-230ENST00000489430 ZNF697Q5TEC3 545 aa21.69■■□□□ 1.06
MRPL55-230ENST00000489430 CRYGNQ8WXF5 182 aa21.69■■□□□ 1.06
MRPL55-230ENST00000489430 SCLYQ96I15 445 aa21.69■■□□□ 1.06
MRPL55-230ENST00000489430 NCOA5Q9HCD5 579 aaKnown RBP21.69■■□□□ 1.06
MRPL55-230ENST00000489430 MTMR10Q9NXD2 777 aa21.69■■□□□ 1.06
MRPL55-230ENST00000489430 NFASCO94856 1347 aa21.69■■□□□ 1.06
MRPL55-230ENST00000489430 CDKL5O76039 1030 aa21.68■■□□□ 1.06
MRPL55-230ENST00000489430 DEXIO95424 95 aa21.68■■□□□ 1.06
MRPL55-230ENST00000489430 SELPP16109 830 aa21.68■■□□□ 1.06
MRPL55-230ENST00000489430 SSRP1Q08945 709 aaKnown RBP21.68■■□□□ 1.06
MRPL55-230ENST00000489430 PPP1R13LQ8WUF5 828 aa21.68■■□□□ 1.06
MRPL55-230ENST00000489430 VWCEQ96DN2 955 aa21.68■■□□□ 1.06
MRPL55-230ENST00000489430 JPH1Q9HDC5 661 aaPredicted RBP21.68■■□□□ 1.06
MRPL55-230ENST00000489430 C17orf102A2RUQ5 167 aa21.67■■□□□ 1.06
MRPL55-230ENST00000489430 CAND2O75155 1236 aa21.67■■□□□ 1.06
MRPL55-230ENST00000489430 ACTN1P12814 892 aa21.67■■□□□ 1.06
MRPL55-230ENST00000489430 TCF7P36402 384 aaPredicted RBP21.67■■□□□ 1.06
MRPL55-230ENST00000489430 SERINC5Q86VE9 423 aa21.67■■□□□ 1.06
MRPL55-230ENST00000489430 DHX38Q92620 1227 aaKnown RBP21.67■■□□□ 1.06
MRPL55-230ENST00000489430 SDF4Q9BRK5 362 aa21.67■■□□□ 1.06
MRPL55-230ENST00000489430 TMEM260Q9NX78 707 aa21.67■■□□□ 1.06
MRPL55-230ENST00000489430 NRCAMQ92823 1304 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 SMIM10L2AP0DMW4 78 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 SMIM10L2BP0DMW5 78 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 CKBP12277 381 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 ZNF76P36508 570 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 JAKMIP3Q5VZ66 844 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 GALNT17Q6IS24 598 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 Q7L0L9 218 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 LRRC8DQ7L1W4 858 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 OTOP2Q7RTS6 562 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 CYP2W1Q8TAV3 490 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 TNPO1Q92973 898 aaKnown RBP21.66■■□□□ 1.06
MRPL55-230ENST00000489430 PGBD1Q96JS3 809 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 C22orf23Q9BZE7 217 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 SMARCAD1Q9H4L7 1026 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 AGO4Q9HCK5 861 aaKnown RBP21.66■■□□□ 1.06
MRPL55-230ENST00000489430 ERAP1Q9NZ08 941 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 SLC9A2Q9UBY0 812 aa21.66■■□□□ 1.06
MRPL55-230ENST00000489430 EMSYQ7Z589 1322 aa21.65■■□□□ 1.06
MRPL55-230ENST00000489430 GSTTP1A0A1W2PQM5 241 aa21.65■■□□□ 1.06
MRPL55-230ENST00000489430 SETQ01105 290 aaPredicted RBP21.65■■□□□ 1.06
MRPL55-230ENST00000489430 TRIM71Q2Q1W2 868 aaKnown RBP21.65■■□□□ 1.06
MRPL55-230ENST00000489430 ATP6V0A1Q93050 837 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms